| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591609
Identifier: 83591609
GI number: 83591609
Start: 334588
End: 335469
Strand: Direct
Name: 83591609
Synonym: Rru_A0269
Alternate gene names: NA
Gene position: 334588-335469 (Clockwise)
Preceding gene: 83591608
Following gene: 83591610
Centisome position: 7.69
GC content: 69.27
Gene sequence:
>882_bases ATGGCAAAGCATCCCGGTTTGGTTACACGACGCCCCCTCTCCTTTGGCACGACTACCCCGGGTTACGACCTGGGCCGGTC GGCTTCGCGGATTTCGGCGCGTCGGACGACCACCCCGCTTCGACGCCTGCTGATGATCGGCGCCGCCCTGAGCGTGGCTG GATTGACCGTCATGGCGGGCCCCCCCGCCGCCGGCGCCATGGAAGGCGCGCTGTCCTCGCCCACGGCCCGGTTGATCGAG CATGGTCTTGATCCCGCCACGCCCGAGCAGGCGCGCCTGGAATTGCGCGATCTGTCGGTTGATCCCGGCAACCGCGACGC TGCCCCCCTGGTCGCCTGGGCGGAAGACCGCCGCTCGTGCTGGGCCGGCGGCGGAAGCGCTGCCCAGGAGTGCCGCCTTG ACGTCAACGCCGCCCTCGAGCGGCTGAGGGCGACGGCCGGCCCGGAGTCCCTGGGCGATGGTCAGTTGGTGATGGTCTTC TTCGAGCCCGGCGAGAGCGGGCTGGGCGATCCGACCGCCCGATCCCTGGTCTCCTCGGTCGCCCATACCCTTCAATCGGG TAATCTGCGGGTGCGCGTGACCGGCTATGCCGATCCCGGGGAACTTTCGGGGAACACGCCCCAGGCCGTCGATCTGGCGA TGGAGCGGGCCCGCGCCGTGGCCTGGAGCCTGCAACAAGAAGGGGTGAGCGCCGGCGATGTCATTCTCTCGGCCCGGGTC AGCGTTGATCCGCCGACGCAAACGGGCAGCGACGCCGAGGACGCCCTCGCCGCCACGCGGGAACGCCGGGTGGAGATGAT CATCGAAGATGCCGCCGTGGCCAATGGACCGTCGAGCGATGAAACGGTGGTTGGCGCCACGTTAATGGCGAAAGGCGACT GA
Upstream 100 bases:
>100_bases TCCCCGGGGTTGTTTGTCTTCTTCTTGTTTTCGCTCGACGGAACCGTGTCCGTGCTTTGGCGTTAATAAATTGTTCGGCA TTCGGACGGAGGACGAAAAC
Downstream 100 bases:
>100_bases CGGCGCGGCCCCGGCCGGCGATCCTCCGTGATCGGGCTTGGGGTGGAGGGACCTTGGCACGGGTGATAAGCTGCCCAATA TGGGGGATAGGCCCGGTACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MAKHPGLVTRRPLSFGTTTPGYDLGRSASRISARRTTTPLRRLLMIGAALSVAGLTVMAGPPAAGAMEGALSSPTARLIE HGLDPATPEQARLELRDLSVDPGNRDAAPLVAWAEDRRSCWAGGGSAAQECRLDVNAALERLRATAGPESLGDGQLVMVF FEPGESGLGDPTARSLVSSVAHTLQSGNLRVRVTGYADPGELSGNTPQAVDLAMERARAVAWSLQQEGVSAGDVILSARV SVDPPTQTGSDAEDALAATRERRVEMIIEDAAVANGPSSDETVVGATLMAKGD
Sequences:
>Translated_293_residues MAKHPGLVTRRPLSFGTTTPGYDLGRSASRISARRTTTPLRRLLMIGAALSVAGLTVMAGPPAAGAMEGALSSPTARLIE HGLDPATPEQARLELRDLSVDPGNRDAAPLVAWAEDRRSCWAGGGSAAQECRLDVNAALERLRATAGPESLGDGQLVMVF FEPGESGLGDPTARSLVSSVAHTLQSGNLRVRVTGYADPGELSGNTPQAVDLAMERARAVAWSLQQEGVSAGDVILSARV SVDPPTQTGSDAEDALAATRERRVEMIIEDAAVANGPSSDETVVGATLMAKGD >Mature_292_residues AKHPGLVTRRPLSFGTTTPGYDLGRSASRISARRTTTPLRRLLMIGAALSVAGLTVMAGPPAAGAMEGALSSPTARLIEH GLDPATPEQARLELRDLSVDPGNRDAAPLVAWAEDRRSCWAGGGSAAQECRLDVNAALERLRATAGPESLGDGQLVMVFF EPGESGLGDPTARSLVSSVAHTLQSGNLRVRVTGYADPGELSGNTPQAVDLAMERARAVAWSLQQEGVSAGDVILSARVS VDPPTQTGSDAEDALAATRERRVEMIIEDAAVANGPSSDETVVGATLMAKGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30371; Mature: 30240
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS51123 OMPA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKHPGLVTRRPLSFGTTTPGYDLGRSASRISARRTTTPLRRLLMIGAALSVAGLTVMAG CCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEC PPAAGAMEGALSSPTARLIEHGLDPATPEQARLELRDLSVDPGNRDAAPLVAWAEDRRSC CCCCHHHHHCCCCHHHHHHHHCCCCCCCHHHHEEHEECCCCCCCCCCCCEEEEHHHHHHH WAGGGSAAQECRLDVNAALERLRATAGPESLGDGQLVMVFFEPGESGLGDPTARSLVSSV CCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH AHTLQSGNLRVRVTGYADPGELSGNTPQAVDLAMERARAVAWSLQQEGVSAGDVILSARV HHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE SVDPPTQTGSDAEDALAATRERRVEMIIEDAAVANGPSSDETVVGATLMAKGD ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCC >Mature Secondary Structure AKHPGLVTRRPLSFGTTTPGYDLGRSASRISARRTTTPLRRLLMIGAALSVAGLTVMAG CCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEC PPAAGAMEGALSSPTARLIEHGLDPATPEQARLELRDLSVDPGNRDAAPLVAWAEDRRSC CCCCHHHHHCCCCHHHHHHHHCCCCCCCHHHHEEHEECCCCCCCCCCCCEEEEHHHHHHH WAGGGSAAQECRLDVNAALERLRATAGPESLGDGQLVMVFFEPGESGLGDPTARSLVSSV CCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH AHTLQSGNLRVRVTGYADPGELSGNTPQAVDLAMERARAVAWSLQQEGVSAGDVILSARV HHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE SVDPPTQTGSDAEDALAATRERRVEMIIEDAAVANGPSSDETVVGATLMAKGD ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA