| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is bcsP31 [H]
Identifier: 83591477
GI number: 83591477
Start: 160535
End: 161587
Strand: Direct
Name: bcsP31 [H]
Synonym: Rru_A0137
Alternate gene names: 83591477
Gene position: 160535-161587 (Clockwise)
Preceding gene: 83591476
Following gene: 83591478
Centisome position: 3.69
GC content: 67.14
Gene sequence:
>1053_bases ATGACGCGGCGGGGGCTTTTCGCCCTGGTGCCGCAGGTGCTGGGGATGGCCGTCGGCATGGCGGGCATGGTCGCCCCGGC CGTGGTCCGGCCGTCCAAGGCCCAGGAATTGCGGTTCCTGCGCATCGGCACCGGGCGGACCAGCGGCGCCTATTTCCCGG TCGGCGGGTTGATCGCCAGCTTGATTTCCAATCCCCCGGGGTCGCGGCCCTGTGAAAAAGGCGGCTCGTGCGGGGTGCCC GGCCTGATCGCCGTCGCCCAGTCAACGGGCGGATCGGTCGATAACATCGTCGGCCTGCAGTCGGGGCAGCTCGATCTGGC CATTTGTCAGGCCGATGTCGCCTATGACGCTTATAGCCGCACCGATGCCAAGGGCGTGCCCGATTTCGCCGAGCTGCGGG CGGTGGCCAGCCTCTATAAGGAAAGCCTGCATCTGGTGGCCCGCGTCGATTCGGGCATTTCCACCCTGGCCGACCTCCGG GGCAAGCGCGTCGGCTTGGGCGACCCGGCTTCGGGAACCCTGGTTAGCGTGCGCTTGTTGCTGTCCGCCCTGGGGCTTGG CGAAAAGGCGGTGAAGGCCGATTACGATCCGCCCTCGGCCGCCGCCGACAAAGTGGCCGATGGTCGCCTTGACGCCTTCT TCTTTTTCGGCGGCGAGCCGGTCGCCCTGATCACTTCCCTGCGCGAACGCGCCGAGGTGACGGTGGTGCCGGTCGACGGG CCGGCGGTCGAGGATCTGGCGGCGCGTTCGCCGTTCCTGACCCTGGGGCTGATCCGCCAACAGGCCTATGACAACCCCCT GCCGATCGTCACCTTGCAGGTGGCGGCGGTTCTGGTGACCCGCGCCGATATGGACGATGCTTTGATCGAGGCGATCACGG CCGCCCTGTGGCATCGCCAGACGAAGATCCTGTTCGAAAAGGGGCCGCCGCAAATCACCCAGGCGACCCTTGGCCAAGCG GTGCAAGGGATCGCCGTTCCCCTCCATCCCGGGGCCATGCGCTATTATCGGAAAGAAGGCATCATCGACCGGCCTGGTCC GATGCAGCCCTGA
Upstream 100 bases:
>100_bases GAAAGGCGCCCTATGGGCGAACGGAATCAGACCATCGGCCAAAGGCAAGGGGCTCCGCCGCCGATGACGGGCAAAGGGGA GGTCGCTGGTGAACAAGCCG
Downstream 100 bases:
>100_bases TCTTTTTTGCGGAGTTTTTCCCGTCTTGCTCGATACCCTGATCCTGGCCGCCGCGGGCGGCGCCCCCATTCCCCTTCATC CCGTGACCAAGGCTGGCTGC
Product: TRAP transporter solute receptor TAXI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MTRRGLFALVPQVLGMAVGMAGMVAPAVVRPSKAQELRFLRIGTGRTSGAYFPVGGLIASLISNPPGSRPCEKGGSCGVP GLIAVAQSTGGSVDNIVGLQSGQLDLAICQADVAYDAYSRTDAKGVPDFAELRAVASLYKESLHLVARVDSGISTLADLR GKRVGLGDPASGTLVSVRLLLSALGLGEKAVKADYDPPSAAADKVADGRLDAFFFFGGEPVALITSLRERAEVTVVPVDG PAVEDLAARSPFLTLGLIRQQAYDNPLPIVTLQVAAVLVTRADMDDALIEAITAALWHRQTKILFEKGPPQITQATLGQA VQGIAVPLHPGAMRYYRKEGIIDRPGPMQP
Sequences:
>Translated_350_residues MTRRGLFALVPQVLGMAVGMAGMVAPAVVRPSKAQELRFLRIGTGRTSGAYFPVGGLIASLISNPPGSRPCEKGGSCGVP GLIAVAQSTGGSVDNIVGLQSGQLDLAICQADVAYDAYSRTDAKGVPDFAELRAVASLYKESLHLVARVDSGISTLADLR GKRVGLGDPASGTLVSVRLLLSALGLGEKAVKADYDPPSAAADKVADGRLDAFFFFGGEPVALITSLRERAEVTVVPVDG PAVEDLAARSPFLTLGLIRQQAYDNPLPIVTLQVAAVLVTRADMDDALIEAITAALWHRQTKILFEKGPPQITQATLGQA VQGIAVPLHPGAMRYYRKEGIIDRPGPMQP >Mature_349_residues TRRGLFALVPQVLGMAVGMAGMVAPAVVRPSKAQELRFLRIGTGRTSGAYFPVGGLIASLISNPPGSRPCEKGGSCGVPG LIAVAQSTGGSVDNIVGLQSGQLDLAICQADVAYDAYSRTDAKGVPDFAELRAVASLYKESLHLVARVDSGISTLADLRG KRVGLGDPASGTLVSVRLLLSALGLGEKAVKADYDPPSAAADKVADGRLDAFFFFGGEPVALITSLRERAEVTVVPVDGP AVEDLAARSPFLTLGLIRQQAYDNPLPIVTLQVAAVLVTRADMDDALIEAITAALWHRQTKILFEKGPPQITQATLGQAV QGIAVPLHPGAMRYYRKEGIIDRPGPMQP
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 36630; Mature: 36499
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRGLFALVPQVLGMAVGMAGMVAPAVVRPSKAQELRFLRIGTGRTSGAYFPVGGLIAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCCCCCCCCCHHHHHHH LISNPPGSRPCEKGGSCGVPGLIAVAQSTGGSVDNIVGLQSGQLDLAICQADVAYDAYSR HHCCCCCCCCCCCCCCCCCCHHHEEECCCCCCHHHEEECCCCCEEEEEEEHHHHHHHHHC TDAKGVPDFAELRAVASLYKESLHLVARVDSGISTLADLRGKRVGLGDPASGTLVSVRLL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH LSALGLGEKAVKADYDPPSAAADKVADGRLDAFFFFGGEPVALITSLRERAEVTVVPVDG HHHHCCCCHHHCCCCCCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCEEEEECCC PAVEDLAARSPFLTLGLIRQQAYDNPLPIVTLQVAAVLVTRADMDDALIEAITAALWHRQ CCHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH TKILFEKGPPQITQATLGQAVQGIAVPLHPGAMRYYRKEGIIDRPGPMQP HHEEEECCCCHHHHHHHHHHHHCCEEECCCHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TRRGLFALVPQVLGMAVGMAGMVAPAVVRPSKAQELRFLRIGTGRTSGAYFPVGGLIAS CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCCCCCCCCCHHHHHHH LISNPPGSRPCEKGGSCGVPGLIAVAQSTGGSVDNIVGLQSGQLDLAICQADVAYDAYSR HHCCCCCCCCCCCCCCCCCCHHHEEECCCCCCHHHEEECCCCCEEEEEEEHHHHHHHHHC TDAKGVPDFAELRAVASLYKESLHLVARVDSGISTLADLRGKRVGLGDPASGTLVSVRLL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH LSALGLGEKAVKADYDPPSAAADKVADGRLDAFFFFGGEPVALITSLRERAEVTVVPVDG HHHHCCCCHHHCCCCCCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCEEEEECCC PAVEDLAARSPFLTLGLIRQQAYDNPLPIVTLQVAAVLVTRADMDDALIEAITAALWHRQ CCHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH TKILFEKGPPQITQATLGQAVQGIAVPLHPGAMRYYRKEGIIDRPGPMQP HHEEEECCCCHHHHHHHHHHHHCCEEECCCHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]