| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83591455
Identifier: 83591455
GI number: 83591455
Start: 134884
End: 136362
Strand: Direct
Name: 83591455
Synonym: Rru_A0115
Alternate gene names: NA
Gene position: 134884-136362 (Clockwise)
Preceding gene: 83591454
Following gene: 83591456
Centisome position: 3.1
GC content: 74.31
Gene sequence:
>1479_bases TTGACGGAGGGGGTGGCGAGGGCCCGGCGGCTGCCCCGGGCATCCCGGGCGCCTGGGGCTGCCCTGGTTCTGGCCGAGGG GGCGGCGCCGCTGCTGGTCTCGGCCGGGGGCGTTCGGGCGATCGAGGCCGAGCGCGGCCAGGGTGCCTTGGCGGGCGCGG CCTTGGCCGAGGCGGTCATTCAGGCCCTGGGCGGCGGGTTCACCGGCCGGTTGCTGGTGCTGGTCGACGCCGCCGACCTG CGGGTTGAAACCGCCGAGATTCCCCGTGTCGGCCCCTTCGATCACCGGGCCTTGCGCCGCGCCCATCTTGGCGCCGCTTT GCCGCAGGCCTTTTGGCGGGCGGCGCGGGTCGTCCGCGCCCCGGTGCGCTCGCTGGTGATGACCGGGCTGGGCGATCGCG GCGGCGCCCTCGCCGCCCTGATCGCCGCCCTGCGCGACCGCGGGCTGGCCTTGCGCGGGCCGATCGCCGGGGCCTTGGCC CTTCCCGCCCTCGGCGCCCGCCTTGATCCGGGGCCGCCGGGCGAGCATCAAGGCTGGGCGCTGACCTTGCTGCTTGGACG CGCCGGCACCCGTCAGATCGTGACCCGCGATGGCGCTCCGGTGCTTGCCCGCCTGGGGCCGGCCGGGCTCGATGGCGACG CCTTGGCCGAGGAGGCGCGGGCGACGTTGGGCTATCTGCGGCGCCGGGGCTATCCCGGTGACGCCCCCTGCCGCTTGCTG CTGCTTGGCGGCGACGGCGCCACCGCCCGGGCCTTCCGCCAAGCCGCCGCGCCTTTGGCGGCGGGGGCGGCCATCCTGGC GCCAACCGATGCCGAGGCCGCCCTGCGCCTGGGCGCCCCCGCCGGCTGTGGCGCCGAAGCCTTGCTGGCCTGGGCGAGCT TGGAGAGCCCTTTCCGTCATTTATGGCTGCTTGCCCCGGCGCAGGAAAAGCCGGGGCCGGCCTTCGCCTCAAGCCGGCTT TTGTTGGCCGTCTGCCTTGTTTTCGGGGTGGCCATGGGGGCTTGGATGGCCTTTGAAGCGCGGACATTGCGCGATCTTAG CCTGCGGCGCGCCAATTTAGCGGGGATGTTGGCTGATTTGGCGGTTGAGAAGGCTGCTTTGGCCCGCGAAAAGGAGAGTT TTCCGGTTCCCGAGGCCGTATTGCGCGCCTTCGCCGCCCACCAGGCCTTGCCGGCTCCCGTGTTCTGGCGGGGCGAGGGG GACGACGGGGGGGAACTGCGCGCCGCTCTTGGCCCGGGGACCCTGGTCGAAGCGCTGCGTTTTGACGGCGAGGGCGTGGC GCCGGGCACGCTTCATCTCAGCCTTGCGGCGTCGACGGCGCCGTCGCCGGGGGTGTTGCGCGCCCGGCTGGGCGCCGCCT TTCCCGGCCGATCCGTTGTGGTTGACGGCGGCCTCGATGAGGCGACCGCGATGCACGGCGGCGGTACGACCACCGCTCGG CCGCTGGTGGTCCGCCTCGGCCCGCCGGGGGCGCGATGA
Upstream 100 bases:
>100_bases CAGCCTGATCGTCTTGGCCGGTTGAATACTGCACGTTTTAATTGATAAAGCCGTGATTCCTGGTCTTATAGGATGCTAGT CCTGGGGAGGAGGCGGCGAT
Downstream 100 bases:
>100_bases GACGGCGGTGGCTGGGCCTTGGCCTCGCCCTGGCCTGCCTGGGGGCGGCCTTGGCCCTGAGCGGGCAGGTGGCGCGCGAA AGCGCCCGTCTTGACGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MTEGVARARRLPRASRAPGAALVLAEGAAPLLVSAGGVRAIEAERGQGALAGAALAEAVIQALGGGFTGRLLVLVDAADL RVETAEIPRVGPFDHRALRRAHLGAALPQAFWRAARVVRAPVRSLVMTGLGDRGGALAALIAALRDRGLALRGPIAGALA LPALGARLDPGPPGEHQGWALTLLLGRAGTRQIVTRDGAPVLARLGPAGLDGDALAEEARATLGYLRRRGYPGDAPCRLL LLGGDGATARAFRQAAAPLAAGAAILAPTDAEAALRLGAPAGCGAEALLAWASLESPFRHLWLLAPAQEKPGPAFASSRL LLAVCLVFGVAMGAWMAFEARTLRDLSLRRANLAGMLADLAVEKAALAREKESFPVPEAVLRAFAAHQALPAPVFWRGEG DDGGELRAALGPGTLVEALRFDGEGVAPGTLHLSLAASTAPSPGVLRARLGAAFPGRSVVVDGGLDEATAMHGGGTTTAR PLVVRLGPPGAR
Sequences:
>Translated_492_residues MTEGVARARRLPRASRAPGAALVLAEGAAPLLVSAGGVRAIEAERGQGALAGAALAEAVIQALGGGFTGRLLVLVDAADL RVETAEIPRVGPFDHRALRRAHLGAALPQAFWRAARVVRAPVRSLVMTGLGDRGGALAALIAALRDRGLALRGPIAGALA LPALGARLDPGPPGEHQGWALTLLLGRAGTRQIVTRDGAPVLARLGPAGLDGDALAEEARATLGYLRRRGYPGDAPCRLL LLGGDGATARAFRQAAAPLAAGAAILAPTDAEAALRLGAPAGCGAEALLAWASLESPFRHLWLLAPAQEKPGPAFASSRL LLAVCLVFGVAMGAWMAFEARTLRDLSLRRANLAGMLADLAVEKAALAREKESFPVPEAVLRAFAAHQALPAPVFWRGEG DDGGELRAALGPGTLVEALRFDGEGVAPGTLHLSLAASTAPSPGVLRARLGAAFPGRSVVVDGGLDEATAMHGGGTTTAR PLVVRLGPPGAR >Mature_491_residues TEGVARARRLPRASRAPGAALVLAEGAAPLLVSAGGVRAIEAERGQGALAGAALAEAVIQALGGGFTGRLLVLVDAADLR VETAEIPRVGPFDHRALRRAHLGAALPQAFWRAARVVRAPVRSLVMTGLGDRGGALAALIAALRDRGLALRGPIAGALAL PALGARLDPGPPGEHQGWALTLLLGRAGTRQIVTRDGAPVLARLGPAGLDGDALAEEARATLGYLRRRGYPGDAPCRLLL LGGDGATARAFRQAAAPLAAGAAILAPTDAEAALRLGAPAGCGAEALLAWASLESPFRHLWLLAPAQEKPGPAFASSRLL LAVCLVFGVAMGAWMAFEARTLRDLSLRRANLAGMLADLAVEKAALAREKESFPVPEAVLRAFAAHQALPAPVFWRGEGD DGGELRAALGPGTLVEALRFDGEGVAPGTLHLSLAASTAPSPGVLRARLGAAFPGRSVVVDGGLDEATAMHGGGTTTARP LVVRLGPPGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50068; Mature: 49936
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEGVARARRLPRASRAPGAALVLAEGAAPLLVSAGGVRAIEAERGQGALAGAALAEAVI CCCHHHHHHHCCCCCCCCCEEEEEECCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHH QALGGGFTGRLLVLVDAADLRVETAEIPRVGPFDHRALRRAHLGAALPQAFWRAARVVRA HHHCCCCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PVRSLVMTGLGDRGGALAALIAALRDRGLALRGPIAGALALPALGARLDPGPPGEHQGWA HHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCEE LTLLLGRAGTRQIVTRDGAPVLARLGPAGLDGDALAEEARATLGYLRRRGYPGDAPCRLL EEEEECCCCCCEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEE LLGGDGATARAFRQAAAPLAAGAAILAPTDAEAALRLGAPAGCGAEALLAWASLESPFRH EECCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHEECCCCCCCHHHHHHHHHHCCCCHH LWLLAPAQEKPGPAFASSRLLLAVCLVFGVAMGAWMAFEARTLRDLSLRRANLAGMLADL EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVEKAALAREKESFPVPEAVLRAFAAHQALPAPVFWRGEGDDGGELRAALGPGTLVEALR HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCCHHHHHHHH FDGEGVAPGTLHLSLAASTAPSPGVLRARLGAAFPGRSVVVDGGLDEATAMHGGGTTTAR CCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHEECCCCCCCCC PLVVRLGPPGAR EEEEEECCCCCC >Mature Secondary Structure TEGVARARRLPRASRAPGAALVLAEGAAPLLVSAGGVRAIEAERGQGALAGAALAEAVI CCHHHHHHHCCCCCCCCCEEEEEECCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHH QALGGGFTGRLLVLVDAADLRVETAEIPRVGPFDHRALRRAHLGAALPQAFWRAARVVRA HHHCCCCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PVRSLVMTGLGDRGGALAALIAALRDRGLALRGPIAGALALPALGARLDPGPPGEHQGWA HHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCEE LTLLLGRAGTRQIVTRDGAPVLARLGPAGLDGDALAEEARATLGYLRRRGYPGDAPCRLL EEEEECCCCCCEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEE LLGGDGATARAFRQAAAPLAAGAAILAPTDAEAALRLGAPAGCGAEALLAWASLESPFRH EECCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHEECCCCCCCHHHHHHHHHHCCCCHH LWLLAPAQEKPGPAFASSRLLLAVCLVFGVAMGAWMAFEARTLRDLSLRRANLAGMLADL EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVEKAALAREKESFPVPEAVLRAFAAHQALPAPVFWRGEGDDGGELRAALGPGTLVEALR HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCCHHHHHHHH FDGEGVAPGTLHLSLAASTAPSPGVLRARLGAAFPGRSVVVDGGLDEATAMHGGGTTTAR CCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHEECCCCCCCCC PLVVRLGPPGAR EEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA