Click here to switch to the map view.

The map label for this gene is oxaA [H]

Identifier: 83591337

GI number: 83591337

Start: 2627523

End: 2628200

Strand: Reverse

Name: oxaA [H]

Synonym: Moth_2521

Alternate gene names: 83591337

Gene position: 2628200-2627523 (Counterclockwise)

Preceding gene: 83591338

Following gene: 83591336

Centisome position: 99.98

GC content: 46.61

Gene sequence:

>678_bases
TTGCGAATATTAGTCGATTTCCTTTCACAATCAATACAATTTTTATATAATATCACCAAGGCCATTGGCATACCCAACTA
TGGCCTAGCTATTATTTTGTTTACCATTGCTGTGAAAGTTATACTCTATCCTTTAACATACAGGCAGTTACGCTCCATGC
GTCGGCTCCAAGAGCTACAGCCAAAGATCCAGGAATTGCAGAAAAAATACAAGAGTAATCCCCAGAAGGCCCAACAGGCC
ATGATGGAACTCTACCAGAAAGAAAAGGTAAATCCCCTGGGGGGTTGTTTACCCCTGCTGATCCAGATGCCTATCTTGTA
TGCTTTATTTACCTCCCTGCGTTCCTTTTTTAACCCGGCCCTCAACCCGACGGTGAATTTGGCCCATGCCAATTTTTTAT
GGATAAGTAACCTTGGCCAGCCTGATCCCTATATCCTGCCGGTGCTGGTAGCTGTAGGAACCTTTTTCCAGCAAAAAGTG
AGTATGGTTAGCGGCGGTCAGGACCAGACCCAGAAAACCATGCTTTTTGTCATGCCCCTGATAATCGGGTGGATGAGCCG
TAACTTTTCGGCCGGCCTGTCCCTTTACTGGGTTACCTTCAGCCTGATGGGCATTTTAGAGCAATGGTTAGCCCGTCGCC
AGCCGCATCTGGTAAAGGAGGAAATCAGCGCCAAATGA

Upstream 100 bases:

>100_bases
GGATGCAGGTGGTTATGACCCCGTTCCCTAACAAAATTGTGGAGGTGAAAACCCGTCTTTAACTTCACAGGTAGAGGGTT
AAGTTAAAGACAGGTTCCCC

Downstream 100 bases:

>100_bases
AAGAGATTGAGGTTAGCGGGAAAACCGTTGAAGAAGCTATTGAAAATGCGCTGAAGTCCCTGGGAGCTAAGCGGGAAGAA
GTCGAGATCAGCATTTTGGA

Product: protein translocase subunit yidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MRILVDFLSQSIQFLYNITKAIGIPNYGLAIILFTIAVKVILYPLTYRQLRSMRRLQELQPKIQELQKKYKSNPQKAQQA
MMELYQKEKVNPLGGCLPLLIQMPILYALFTSLRSFFNPALNPTVNLAHANFLWISNLGQPDPYILPVLVAVGTFFQQKV
SMVSGGQDQTQKTMLFVMPLIIGWMSRNFSAGLSLYWVTFSLMGILEQWLARRQPHLVKEEISAK

Sequences:

>Translated_225_residues
MRILVDFLSQSIQFLYNITKAIGIPNYGLAIILFTIAVKVILYPLTYRQLRSMRRLQELQPKIQELQKKYKSNPQKAQQA
MMELYQKEKVNPLGGCLPLLIQMPILYALFTSLRSFFNPALNPTVNLAHANFLWISNLGQPDPYILPVLVAVGTFFQQKV
SMVSGGQDQTQKTMLFVMPLIIGWMSRNFSAGLSLYWVTFSLMGILEQWLARRQPHLVKEEISAK
>Mature_225_residues
MRILVDFLSQSIQFLYNITKAIGIPNYGLAIILFTIAVKVILYPLTYRQLRSMRRLQELQPKIQELQKKYKSNPQKAQQA
MMELYQKEKVNPLGGCLPLLIQMPILYALFTSLRSFFNPALNPTVNLAHANFLWISNLGQPDPYILPVLVAVGTFFQQKV
SMVSGGQDQTQKTMLFVMPLIIGWMSRNFSAGLSLYWVTFSLMGILEQWLARRQPHLVKEEISAK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=192, Percent_Identity=43.75, Blast_Score=136, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24662345, Length=214, Percent_Identity=24.7663551401869, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356443, Length=214, Percent_Identity=24.7663551401869, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 25812; Mature: 25812

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILVDFLSQSIQFLYNITKAIGIPNYGLAIILFTIAVKVILYPLTYRQLRSMRRLQELQ
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PKIQELQKKYKSNPQKAQQAMMELYQKEKVNPLGGCLPLLIQMPILYALFTSLRSFFNPA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LNPTVNLAHANFLWISNLGQPDPYILPVLVAVGTFFQQKVSMVSGGQDQTQKTMLFVMPL
CCCCEEHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IIGWMSRNFSAGLSLYWVTFSLMGILEQWLARRQPHLVKEEISAK
HHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
>Mature Secondary Structure
MRILVDFLSQSIQFLYNITKAIGIPNYGLAIILFTIAVKVILYPLTYRQLRSMRRLQELQ
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PKIQELQKKYKSNPQKAQQAMMELYQKEKVNPLGGCLPLLIQMPILYALFTSLRSFFNPA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LNPTVNLAHANFLWISNLGQPDPYILPVLVAVGTFFQQKVSMVSGGQDQTQKTMLFVMPL
CCCCEEHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IIGWMSRNFSAGLSLYWVTFSLMGILEQWLARRQPHLVKEEISAK
HHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA