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The map label for this gene is hypC [H]

Identifier: 83591001

GI number: 83591001

Start: 2277798

End: 2278040

Strand: Reverse

Name: hypC [H]

Synonym: Moth_2178

Alternate gene names: 83591001

Gene position: 2278040-2277798 (Counterclockwise)

Preceding gene: 83591002

Following gene: 83591000

Centisome position: 86.66

GC content: 44.03

Gene sequence:

>243_bases
ATGTGTTTAGGTATTGTGGGTAAAGTAATTAAGGTATCTGCGGCTGATGAAACCGCGATAATTGATGTTCACGGCGCCCG
CAGGGAGATATCCATAGCTTTACTGGGGCAGGTAAAGGTTGGCGATTATGTGCTGGTTCATGCCGGATTTGCCATTGAAA
AGATTGATTTAAAAGAAGCCGAACAGATGGTAAAAATGTGGGAGGAACAATTAAACGATGTCACCCCTGGACAGGTTTTG
TGA

Upstream 100 bases:

>100_bases
CTGGCGACGGTTATCGCCTGCTGGTCCACCGGCAGGTACCGGCCAATGATGGGGGGCTTTCCCTGGGCCAGGCAGTAATC
GCTTGCCGGAGGTGGCAACA

Downstream 100 bases:

>100_bases
TACGGAACTAAGCAGGAAACTCATGGGCCGGGTTGCCGCCCTGGCAGATGAGGTTGCGGAACGCCTTGGGCGGCCGGCAG
TTTTTATAGAAGTATGCGGT

Product: hydrogenase assembly chaperone hypC/hupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MCLGIVGKVIKVSAADETAIIDVHGARREISIALLGQVKVGDYVLVHAGFAIEKIDLKEAEQMVKMWEEQLNDVTPGQVL

Sequences:

>Translated_80_residues
MCLGIVGKVIKVSAADETAIIDVHGARREISIALLGQVKVGDYVLVHAGFAIEKIDLKEAEQMVKMWEEQLNDVTPGQVL
>Mature_80_residues
MCLGIVGKVIKVSAADETAIIDVHGARREISIALLGQVKVGDYVLVHAGFAIEKIDLKEAEQMVKMWEEQLNDVTPGQVL

Specific function: Is Required For The Formation Of All Three Hydrogenase Isoenzymes. May Bind To The Precursor Form Of The Large Subunit Of Dehydrogenases To Keep Them In A Conformation Accessible For Metal Incorporation. [C]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 8702; Mature: 8702

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLGIVGKVIKVSAADETAIIDVHGARREISIALLGQVKVGDYVLVHAGFAIEKIDLKEA
CCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEEEEEECCCCEEEEECCCEEEEECHHHH
EQMVKMWEEQLNDVTPGQVL
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MCLGIVGKVIKVSAADETAIIDVHGARREISIALLGQVKVGDYVLVHAGFAIEKIDLKEA
CCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEEEEEECCCCEEEEECCCEEEEECHHHH
EQMVKMWEEQLNDVTPGQVL
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8352644; 12948488 [H]