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The map label for this gene is skgA [H]

Identifier: 83590904

GI number: 83590904

Start: 2166864

End: 2167778

Strand: Reverse

Name: skgA [H]

Synonym: Moth_2075

Alternate gene names: 83590904

Gene position: 2167778-2166864 (Counterclockwise)

Preceding gene: 83590909

Following gene: 83590902

Centisome position: 82.46

GC content: 54.1

Gene sequence:

>915_bases
ATGGAAAAGTATCCTATCGGGACGTTAGCCCGTAAAAGCGGCGTATCTGTAAAAACTATCCGTTACTACAGCAATATGGG
ACTGCTCCCACCCGTCGAGGTTACCGGGGCAGGCTACCGGCTGTACAGTGACCGGGAATTGCTGCGCTTACAGCAGATCA
CCATCCTGCGCTTTCTTGGCGCTTCCCTCAAGCAGGTTAAGGCGGTATTGGCCCAGGAGTTAGCTTTGCCCGACCTTTTG
ACCGCCCAGATTGCAGCTGTGGATGCCGAGATTGAACGCTGGCGCAGGCTACGAAGCATTATCACCCGGGCCAGTGAAGG
GCTCCGTCACCAGGAGCAACCATGGCACTACCTCCGTAATTTAATGGGGGTGATTAAGATGACACAGGAAGAAAGAGCGC
AATGGTGGGGTGAGTGGTGGCGTAAGCGCTTGGCCGACTCCCCCTTGCCGGAAGAATTCGTGCAAGGGTTTGTCCAGGAT
ATTCAAAATAGCATCACGGCCGAACCTACCGAAGCCGAAGAGGATTTTATACTGGCGGCCCAGGAGGGTAGAAAAGAAAC
CTACGTTGCCAACACTGTAGAGCGGTGGACCAAAGACCATCATCATATGAGTTACGATGAATGGCTAACACGTGTAAGGG
AGATTTTTGGCCGCTTCCGCGCCCTTGTCGACGCAGCTCCGGACGATCCTCTGGTACAAGCAGCGGTGGAAGAGTATATT
CGATTAAGCGGGCCTTTAACCGCAACTACGGTTAAACGGCTGCTGGACAACATAAACCGGCCCGTCATCCGCCGCATGGC
CCAAGCTGCAGACTTGCTCGACACCACCCAACAGATGGAGCGGGTGTATCAGCTTATCCAGGATGCCCTTAAAATTCGCT
TGCGACGCCTTTCACCGGGGGAGATCCAGAATTGA

Upstream 100 bases:

>100_bases
TACCATTTAAAGCTTCTCGCCAAAACAAACGCCTAAATAAGCACGGGCCCCTTGACTCTCCCCCAAGGGGAATCTTGTAG
AATAAAGCTGGAGGCCAGCC

Downstream 100 bases:

>100_bases
CCGGTAGCCCGGCGGAAGTTGGAAGCAGTTCCTGTGCAGACGGTCTAAAGTGTTGAGTAAAAAAAGGCCACCGGGGAATA
ACCCCCTGTGGCGGTTTTGT

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Stationary-phase regulation of katG protein [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MEKYPIGTLARKSGVSVKTIRYYSNMGLLPPVEVTGAGYRLYSDRELLRLQQITILRFLGASLKQVKAVLAQELALPDLL
TAQIAAVDAEIERWRRLRSIITRASEGLRHQEQPWHYLRNLMGVIKMTQEERAQWWGEWWRKRLADSPLPEEFVQGFVQD
IQNSITAEPTEAEEDFILAAQEGRKETYVANTVERWTKDHHHMSYDEWLTRVREIFGRFRALVDAAPDDPLVQAAVEEYI
RLSGPLTATTVKRLLDNINRPVIRRMAQAADLLDTTQQMERVYQLIQDALKIRLRRLSPGEIQN

Sequences:

>Translated_304_residues
MEKYPIGTLARKSGVSVKTIRYYSNMGLLPPVEVTGAGYRLYSDRELLRLQQITILRFLGASLKQVKAVLAQELALPDLL
TAQIAAVDAEIERWRRLRSIITRASEGLRHQEQPWHYLRNLMGVIKMTQEERAQWWGEWWRKRLADSPLPEEFVQGFVQD
IQNSITAEPTEAEEDFILAAQEGRKETYVANTVERWTKDHHHMSYDEWLTRVREIFGRFRALVDAAPDDPLVQAAVEEYI
RLSGPLTATTVKRLLDNINRPVIRRMAQAADLLDTTQQMERVYQLIQDALKIRLRRLSPGEIQN
>Mature_304_residues
MEKYPIGTLARKSGVSVKTIRYYSNMGLLPPVEVTGAGYRLYSDRELLRLQQITILRFLGASLKQVKAVLAQELALPDLL
TAQIAAVDAEIERWRRLRSIITRASEGLRHQEQPWHYLRNLMGVIKMTQEERAQWWGEWWRKRLADSPLPEEFVQGFVQD
IQNSITAEPTEAEEDFILAAQEGRKETYVANTVERWTKDHHHMSYDEWLTRVREIFGRFRALVDAAPDDPLVQAAVEEYI
RLSGPLTATTVKRLLDNINRPVIRRMAQAADLLDTTQQMERVYQLIQDALKIRLRRLSPGEIQN

Specific function: Regulates the induction of katG (catalase-peroxidase) in stationary phase [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR012925 [H]

Pfam domain/function: PF00376 MerR; PF07739 TipAS [H]

EC number: NA

Molecular weight: Translated: 35234; Mature: 35234

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKYPIGTLARKSGVSVKTIRYYSNMGLLPPVEVTGAGYRLYSDRELLRLQQITILRFLG
CCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCEECCCCEEEECCHHHHHHHHHHHHHHHH
ASLKQVKAVLAQELALPDLLTAQIAAVDAEIERWRRLRSIITRASEGLRHQEQPWHYLRN
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LMGVIKMTQEERAQWWGEWWRKRLADSPLPEEFVQGFVQDIQNSITAEPTEAEEDFILAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEC
QEGRKETYVANTVERWTKDHHHMSYDEWLTRVREIFGRFRALVDAAPDDPLVQAAVEEYI
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RLSGPLTATTVKRLLDNINRPVIRRMAQAADLLDTTQQMERVYQLIQDALKIRLRRLSPG
HHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EIQN
CCCC
>Mature Secondary Structure
MEKYPIGTLARKSGVSVKTIRYYSNMGLLPPVEVTGAGYRLYSDRELLRLQQITILRFLG
CCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCEECCCCEEEECCHHHHHHHHHHHHHHHH
ASLKQVKAVLAQELALPDLLTAQIAAVDAEIERWRRLRSIITRASEGLRHQEQPWHYLRN
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LMGVIKMTQEERAQWWGEWWRKRLADSPLPEEFVQGFVQDIQNSITAEPTEAEEDFILAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEC
QEGRKETYVANTVERWTKDHHHMSYDEWLTRVREIFGRFRALVDAAPDDPLVQAAVEEYI
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RLSGPLTATTVKRLLDNINRPVIRRMAQAADLLDTTQQMERVYQLIQDALKIRLRRLSPG
HHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EIQN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10498730 [H]