Click here to switch to the map view.

The map label for this gene is yeiE [C]

Identifier: 83590659

GI number: 83590659

Start: 1884380

End: 1885288

Strand: Reverse

Name: yeiE [C]

Synonym: Moth_1825

Alternate gene names: 83590659

Gene position: 1885288-1884380 (Counterclockwise)

Preceding gene: 83590661

Following gene: 83590658

Centisome position: 71.72

GC content: 63.37

Gene sequence:

>909_bases
ATGAATATCAACCATTTAATTACTTTCATTACAACCGTCGAAAAGGGAACCCTGTCGGCGGCGGCCGAAGAACTGCACCT
GACCCAGCCGGCGGTGAGCAAGCAACTCCAGGCCCTGGAAGACTACTTCGGTCTGCGCCTCCTGGAGCGCCGCGGCCGGG
AAGTGCGGCTGACGGCCGCCGGGGAGATCTGCTACCGCCATGCCAGGATAATCGCCAGCCATCTAAACCAAACCCGGCGG
GAACTGGCGGAGCTAACCCAGCTGGTGCGGGGCCGCCTCCTCCTGGGGGCCAGTACCACCCCCGGGCAGTATATCTTGCC
CCGGCTGATAGGTGCCTTTCGCCGGGAATACCCCAGGGTGGAGGTTATCTTGACAATCGCCGACACCCAGGAAGTGGTGC
AGCGCCTCCAGGAGGGCGAGATTGATCTGGGGGTGGTCGGCGCTGCCGGCGGCCGGGGAAAGAATCTTTCTTACAGCCGC
CTGGCGGGGGATGAACTGGTACTTATCGTCCCGCCGGGGCACCGCCTGGCCGGGGCAACGGCCATATCCCCCGGGGAGCT
CAAGGAAGAACCGCTGGTCTGGCGGGAATCCGGTTCCGGGACCCGCAGGGTGGTAGAGGAGCGCCTGGCGGCGGCGGGTT
TTACCGTCGATCCAGAGCAAATCGTTATGGAACTGGGCAGTACGGAAGCCATTGTCAGCGCCGTGGAGGCCGGCCTGGGC
ATCTCCCTGGTTACCTCCTGGGCGGTGGAAAAGAGCGTCAAGCTGGGACGCCTAGCAGTCGTCACCCTGCAGGGCGTAGA
CTTAAAAAGGGACCTGTACCTGGTCCGGCGCCGTCAACCTTTAAGCCCGGCTGCTGAAGCCTTTGTCAATTTCGCGGCCG
ACCACCAGCCCCGGCCGCTGGTATCTTGA

Upstream 100 bases:

>100_bases
AAACCCATAATAAAACCACCTCCCCCTTATTCTTGGTCTCCGCCCAGCGGTTTATGCGGCTAAGTCCTGGAACTATTTTT
TGCAAACGGAGCCAGGAGCA

Downstream 100 bases:

>100_bases
CGCCAGGACGGGAAACAGGTATTATTAACTTAAATTAAAATTTAAATTGAATAGTCATCTCCGAGCCGGTGCTCCTAAGG
GCTGTCGCCTATGGAACACC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MNINHLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLTAAGEICYRHARIIASHLNQTRR
ELAELTQLVRGRLLLGASTTPGQYILPRLIGAFRREYPRVEVILTIADTQEVVQRLQEGEIDLGVVGAAGGRGKNLSYSR
LAGDELVLIVPPGHRLAGATAISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAIVSAVEAGLG
ISLVTSWAVEKSVKLGRLAVVTLQGVDLKRDLYLVRRRQPLSPAAEAFVNFAADHQPRPLVS

Sequences:

>Translated_302_residues
MNINHLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLTAAGEICYRHARIIASHLNQTRR
ELAELTQLVRGRLLLGASTTPGQYILPRLIGAFRREYPRVEVILTIADTQEVVQRLQEGEIDLGVVGAAGGRGKNLSYSR
LAGDELVLIVPPGHRLAGATAISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAIVSAVEAGLG
ISLVTSWAVEKSVKLGRLAVVTLQGVDLKRDLYLVRRRQPLSPAAEAFVNFAADHQPRPLVS
>Mature_302_residues
MNINHLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLTAAGEICYRHARIIASHLNQTRR
ELAELTQLVRGRLLLGASTTPGQYILPRLIGAFRREYPRVEVILTIADTQEVVQRLQEGEIDLGVVGAAGGRGKNLSYSR
LAGDELVLIVPPGHRLAGATAISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAIVSAVEAGLG
ISLVTSWAVEKSVKLGRLAVVTLQGVDLKRDLYLVRRRQPLSPAAEAFVNFAADHQPRPLVS

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=296, Percent_Identity=31.0810810810811, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1788748, Length=295, Percent_Identity=29.8305084745763, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI157672245, Length=291, Percent_Identity=28.1786941580756, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1787879, Length=292, Percent_Identity=30.8219178082192, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI145693105, Length=293, Percent_Identity=27.3037542662116, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1790262, Length=302, Percent_Identity=31.1258278145695, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1787530, Length=235, Percent_Identity=28.936170212766, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1790399, Length=288, Percent_Identity=28.4722222222222, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1790208, Length=300, Percent_Identity=26.3333333333333, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1787601, Length=183, Percent_Identity=25.6830601092896, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI87082132, Length=258, Percent_Identity=28.2945736434109, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI87081904, Length=271, Percent_Identity=28.4132841328413, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1789506, Length=260, Percent_Identity=24.2307692307692, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788296, Length=229, Percent_Identity=27.9475982532751, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788887, Length=189, Percent_Identity=29.6296296296296, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1788297, Length=245, Percent_Identity=26.530612244898, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1789204, Length=246, Percent_Identity=25.609756097561, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787949, Length=288, Percent_Identity=24.6527777777778, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1789173, Length=278, Percent_Identity=25.8992805755396, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786401, Length=141, Percent_Identity=32.6241134751773, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1787128, Length=302, Percent_Identity=25.1655629139073, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI2367136, Length=286, Percent_Identity=23.7762237762238, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1789639, Length=142, Percent_Identity=30.2816901408451, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1788626, Length=243, Percent_Identity=28.3950617283951, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI48994962, Length=152, Percent_Identity=29.6052631578947, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32970; Mature: 32970

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINHLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLTAA
CCHHHEEEEEHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEH
GEICYRHARIIASHLNQTRRELAELTQLVRGRLLLGASTTPGQYILPRLIGAFRREYPRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHCCCCE
EVILTIADTQEVVQRLQEGEIDLGVVGAAGGRGKNLSYSRLAGDELVLIVPPGHRLAGAT
EEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHEECCCCEEEEECCCCCCCCCC
AISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAIVSAVEAGLG
CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHCCC
ISLVTSWAVEKSVKLGRLAVVTLQGVDLKRDLYLVRRRQPLSPAAEAFVNFAADHQPRPL
HHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
VS
CC
>Mature Secondary Structure
MNINHLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLTAA
CCHHHEEEEEHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEH
GEICYRHARIIASHLNQTRRELAELTQLVRGRLLLGASTTPGQYILPRLIGAFRREYPRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHCCCCE
EVILTIADTQEVVQRLQEGEIDLGVVGAAGGRGKNLSYSRLAGDELVLIVPPGHRLAGAT
EEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHEECCCCEEEEECCCCCCCCCC
AISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAIVSAVEAGLG
CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHCCC
ISLVTSWAVEKSVKLGRLAVVTLQGVDLKRDLYLVRRRQPLSPAAEAFVNFAADHQPRPL
HHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
VS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]