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The map label for this gene is secF

Identifier: 83590526

GI number: 83590526

Start: 1728163

End: 1729095

Strand: Reverse

Name: secF

Synonym: Moth_1690

Alternate gene names: 83590526

Gene position: 1729095-1728163 (Counterclockwise)

Preceding gene: 83590527

Following gene: 83590525

Centisome position: 65.78

GC content: 54.66

Gene sequence:

>933_bases
ATGAACTTCAACTTCGATTTTGTCAACCGGCGCAAATGGTGGTATGCCCTGTCGCTGCTGGTCATTATCCCGGGGCTCAT
TGCCATGGCCCTGCACCGGCCTGTCTTGAACTTCGGTATTGATTTTACCGGCGGCAATATTATCCAGGTCCAGTTCCACC
AGCCGGTAACCTCCGGCCAGGTGCGGGATGTCCTGGACGGATTAAATCTCGGTAAGAGTTCCATCCAGGAATCGGGCAGC
AACCAGTTTTTGATCCGGACGACGGAGTTAAACGAAGAACAGACCAACCAGGTTATCAGCACTTTACAGAGTAAACTGGG
GCAGCTGGATCTCAAGCGGAACGAAAAGGTGGGCGGTACCATCGGTCGCGAGCTGACCATCCGGGGCGTAGAGGCCATGG
TTATCGCCTGGATCCTGATGATCATCTATATCACCATCCGCTTTGAGTTCCTTTCCGGTCTCGCGGCCATCCTGGCCCTG
GTCCACGACGTCCTGGTGACCATCGGCTTTTTCGCCCTCTTCCGCTGGGAAGTCGACAGTACCTTTATCGCGGCCATACT
AACCATTATCGGTTATTCCATCAACGATACCATTGTTATCTTTGACCGCATCCGGGAGAACCTGCGGCTACGCAAGAAAG
AAACTATCGAAGAAGTGGTCAACCGCAGTATTAACCAGACCCTGACCCGGTCGATTAATACTGTTCTGACGGTTATTTTC
GCCCTCCTGGCCCTGATACTCCTGGGAGGCGAGACTACCAGGACCTTTGCCCTGGCCATGCTCATCGGTACCATCAGCGG
TTGCTACTCTTCCATCTTTACGGCCAGCCCCCTGTGGATTGATTTCCGGCATCTGAGCCGGGAGCGCCACCGGCAGGCGG
CAGTGGCCAAGGCCGATACCAAAGCCAAGACGCGCAAGGCTACTTCCCATTAG

Upstream 100 bases:

>100_bases
TCCTGCTGCACCTGGTGGTAGGGGTGCCGGCCTTCCACAACCTCTGGCTCTTTGGCGTTAAAGAAGAGCAAATCCCGGCA
GCGGCAAGGGGTGAGATTTA

Downstream 100 bases:

>100_bases
AGTTAGGTTATAAGAGGGCGAATCAGGAGATAGCCTGCCCGATAAATGCGGCAGGCTATCTTTTATGCGCGCCCGTCATG
GGCACTGAATCGTATGTTAC

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MNFNFDFVNRRKWWYALSLLVIIPGLIAMALHRPVLNFGIDFTGGNIIQVQFHQPVTSGQVRDVLDGLNLGKSSIQESGS
NQFLIRTTELNEEQTNQVISTLQSKLGQLDLKRNEKVGGTIGRELTIRGVEAMVIAWILMIIYITIRFEFLSGLAAILAL
VHDVLVTIGFFALFRWEVDSTFIAAILTIIGYSINDTIVIFDRIRENLRLRKKETIEEVVNRSINQTLTRSINTVLTVIF
ALLALILLGGETTRTFALAMLIGTISGCYSSIFTASPLWIDFRHLSRERHRQAAVAKADTKAKTRKATSH

Sequences:

>Translated_310_residues
MNFNFDFVNRRKWWYALSLLVIIPGLIAMALHRPVLNFGIDFTGGNIIQVQFHQPVTSGQVRDVLDGLNLGKSSIQESGS
NQFLIRTTELNEEQTNQVISTLQSKLGQLDLKRNEKVGGTIGRELTIRGVEAMVIAWILMIIYITIRFEFLSGLAAILAL
VHDVLVTIGFFALFRWEVDSTFIAAILTIIGYSINDTIVIFDRIRENLRLRKKETIEEVVNRSINQTLTRSINTVLTVIF
ALLALILLGGETTRTFALAMLIGTISGCYSSIFTASPLWIDFRHLSRERHRQAAVAKADTKAKTRKATSH
>Mature_310_residues
MNFNFDFVNRRKWWYALSLLVIIPGLIAMALHRPVLNFGIDFTGGNIIQVQFHQPVTSGQVRDVLDGLNLGKSSIQESGS
NQFLIRTTELNEEQTNQVISTLQSKLGQLDLKRNEKVGGTIGRELTIRGVEAMVIAWILMIIYITIRFEFLSGLAAILAL
VHDVLVTIGFFALFRWEVDSTFIAAILTIIGYSINDTIVIFDRIRENLRLRKKETIEEVVNRSINQTLTRSINTVLTVIF
ALLALILLGGETTRTFALAMLIGTISGCYSSIFTASPLWIDFRHLSRERHRQAAVAKADTKAKTRKATSH

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=300, Percent_Identity=34, Blast_Score=174, Evalue=5e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 34850; Mature: 34850

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFNFDFVNRRKWWYALSLLVIIPGLIAMALHRPVLNFGIDFTGGNIIQVQFHQPVTSGQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCH
VRDVLDGLNLGKSSIQESGSNQFLIRTTELNEEQTNQVISTLQSKLGQLDLKRNEKVGGT
HHHHHHHHCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
IGRELTIRGVEAMVIAWILMIIYITIRFEFLSGLAAILALVHDVLVTIGFFALFRWEVDS
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TFIAAILTIIGYSINDTIVIFDRIRENLRLRKKETIEEVVNRSINQTLTRSINTVLTVIF
HHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLALILLGGETTRTFALAMLIGTISGCYSSIFTASPLWIDFRHLSRERHRQAAVAKADT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KAKTRKATSH
HHHHHCCCCC
>Mature Secondary Structure
MNFNFDFVNRRKWWYALSLLVIIPGLIAMALHRPVLNFGIDFTGGNIIQVQFHQPVTSGQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCH
VRDVLDGLNLGKSSIQESGSNQFLIRTTELNEEQTNQVISTLQSKLGQLDLKRNEKVGGT
HHHHHHHHCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
IGRELTIRGVEAMVIAWILMIIYITIRFEFLSGLAAILALVHDVLVTIGFFALFRWEVDS
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TFIAAILTIIGYSINDTIVIFDRIRENLRLRKKETIEEVVNRSINQTLTRSINTVLTVIF
HHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLALILLGGETTRTFALAMLIGTISGCYSSIFTASPLWIDFRHLSRERHRQAAVAKADT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KAKTRKATSH
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA