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The map label for this gene is yjiR [C]

Identifier: 83590525

GI number: 83590525

Start: 1727207

End: 1727851

Strand: Reverse

Name: yjiR [C]

Synonym: Moth_1689

Alternate gene names: 83590525

Gene position: 1727851-1727207 (Counterclockwise)

Preceding gene: 83590526

Following gene: 83590524

Centisome position: 65.73

GC content: 51.63

Gene sequence:

>645_bases
ATGGACTATGTAAGCAGCGAAGAACTGGCCCGTTATGAACAAATTGCGCTAATGATTGCCGGTGAGATTCTCCGAGGAAC
TTACAACGAAGGTGAAAGAGTATCGGGGCGGACTATTTTAGCCGGGCAGTATGGAGTTTCGCCAGAAACAGTAAGAAAGG
CCCTGGCGCTTCTGCAGGCGCGACAGGTGGTTGAAGTAGTTCCAGGGAGTGGGGTAATTATCCTCTCCCGTCAGGCCGCC
CGGGACTTTATCGAGGATTTTCACGAACATAACTCCCTTGAGGTCTTGGAGCGCCGGCTGGATACCCTTATCAAACAGCG
TAACAAGTTAAATGCGGAAATCGATAAACTGGTTAAAGAAATTGTGCACTTTAAAACAGGCATGCTAAAAAACATGCAGA
ATGCTGAAGAGATCATGGTTTCACCGGGTTCACCCCTTGTGGGAAAGAGCGTGCAGGAGGCCCAATTGAGGACAGTTACG
GGAGTTATCGTTACCGCTGTACGGCGCCGGGGTCGCTGGTATGCCTCTCCGGGGACAGAGCTTCGATTAAGCGCAGGGGA
TTTGCTCCTGGTGGTGGGAAACCAGAAGGCGGTGGACCGGTTGCGCCGGCTGGCTGAAGGTAAACAAGAGCTTAATGACG
GTTAA

Upstream 100 bases:

>100_bases
CTTCAGAACTGTTTTTGTAACTAAAAATGGCGGAGTGGTACAGGTTGACAAGTGACAATCTAAGTTATAATATAGAGTTG
GCGGTAAGGAGAGACTAAAA

Downstream 100 bases:

>100_bases
TACCAGGCGTTCTTTAGCCTGAAACAACCCTGTTTAAAGGAGGACTCTATGCTTACCTTCGAACACGTCTCGAAAGTATA
TGACGGCAATCGAATAGCCG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; TrkA Domain-Containing Protein; Regulatory Protein; Transcriptional Repressor BusR; GntR Family Regulatory Protein; TrkA-C Domain Protein; Regulatory Protein GntR HTH; TrkA-C Domain-Containing Protein; Fused Transcriptional Regulator/Membrane Protein; Gntr-Family Transcriptional Regulator; GntR Family Transcription Regulator

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MDYVSSEELARYEQIALMIAGEILRGTYNEGERVSGRTILAGQYGVSPETVRKALALLQARQVVEVVPGSGVIILSRQAA
RDFIEDFHEHNSLEVLERRLDTLIKQRNKLNAEIDKLVKEIVHFKTGMLKNMQNAEEIMVSPGSPLVGKSVQEAQLRTVT
GVIVTAVRRRGRWYASPGTELRLSAGDLLLVVGNQKAVDRLRRLAEGKQELNDG

Sequences:

>Translated_214_residues
MDYVSSEELARYEQIALMIAGEILRGTYNEGERVSGRTILAGQYGVSPETVRKALALLQARQVVEVVPGSGVIILSRQAA
RDFIEDFHEHNSLEVLERRLDTLIKQRNKLNAEIDKLVKEIVHFKTGMLKNMQNAEEIMVSPGSPLVGKSVQEAQLRTVT
GVIVTAVRRRGRWYASPGTELRLSAGDLLLVVGNQKAVDRLRRLAEGKQELNDG
>Mature_214_residues
MDYVSSEELARYEQIALMIAGEILRGTYNEGERVSGRTILAGQYGVSPETVRKALALLQARQVVEVVPGSGVIILSRQAA
RDFIEDFHEHNSLEVLERRLDTLIKQRNKLNAEIDKLVKEIVHFKTGMLKNMQNAEEIMVSPGSPLVGKSVQEAQLRTVT
GVIVTAVRRRGRWYASPGTELRLSAGDLLLVVGNQKAVDRLRRLAEGKQELNDG

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23804; Mature: 23804

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYVSSEELARYEQIALMIAGEILRGTYNEGERVSGRTILAGQYGVSPETVRKALALLQA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
RQVVEVVPGSGVIILSRQAARDFIEDFHEHNSLEVLERRLDTLIKQRNKLNAEIDKLVKE
HHHHHHCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IVHFKTGMLKNMQNAEEIMVSPGSPLVGKSVQEAQLRTVTGVIVTAVRRRGRWYASPGTE
HHHHHHHHHHHHCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCE
LRLSAGDLLLVVGNQKAVDRLRRLAEGKQELNDG
EEEECCCEEEEECCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDYVSSEELARYEQIALMIAGEILRGTYNEGERVSGRTILAGQYGVSPETVRKALALLQA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
RQVVEVVPGSGVIILSRQAARDFIEDFHEHNSLEVLERRLDTLIKQRNKLNAEIDKLVKE
HHHHHHCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IVHFKTGMLKNMQNAEEIMVSPGSPLVGKSVQEAQLRTVTGVIVTAVRRRGRWYASPGTE
HHHHHHHHHHHHCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCE
LRLSAGDLLLVVGNQKAVDRLRRLAEGKQELNDG
EEEECCCEEEEECCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA