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The map label for this gene is opuCB [H]

Identifier: 83590523

GI number: 83590523

Start: 1725394

End: 1726044

Strand: Reverse

Name: opuCB [H]

Synonym: Moth_1687

Alternate gene names: 83590523

Gene position: 1726044-1725394 (Counterclockwise)

Preceding gene: 83590524

Following gene: 83590522

Centisome position: 65.66

GC content: 53.92

Gene sequence:

>651_bases
ATGAGGCTAGTGCTTAGCTGGACGGAGTTTTTGGCTGCCAAAGGCTCGAGTATCCTATCTGCTACCGGGAAACACCTGCT
ACTTTCGCTAGGCTCAGTACTGCTGGGAACCATCATCGCCGTGCCCCTGGGTATCCTTCTTGCCCGCCATCAGCGAGTGG
CAGCGGTGATGCTCGGTATTTCCAGTACTATTCAAACCATTCCCAGCCTGGCGTTTTTTGGATTTGTTCTGCCTTTTCTT
GGCATTGGTATAGTACCGGCCATGACTGTATTGTTCCTCTACTCGATACTCCCAATTCTACGCAACACCTATACCGGCAT
TCGCGAAGTAAATCCGGCCTACCTGGAAGCCGGTATAGGTATGGGGATGAACCGGAGACAGCTTTTAACCTGGATACAGT
TCCCCTTAGCCTTCCCGGTTATCATGTCCGGCATCCGTGTGTCTACTGTTTATATTATCAGCTGGGCCACCCTTTCGGCC
TTAATCGGCGCCGGTGGATTGGGCGATCCAATTCTTGCCGGCATCCACACCTATGACGCTAAGCTCATTATGGCCGGTGC
ATTGCCCGCTGCCCTGCTGGCCCTACTGGCCAGCTGGTCACTAGGTTTTGTAGAGCGTGCGGTAACCCCGCGGGGGCTGC
GACAGCGATAA

Upstream 100 bases:

>100_bases
CGGCTGGAGTACCTGCCGGTAATCGATAAGGAGGGCCGCTTGAAGGGACTGGTCACCAGGACCAGCATGGTCAATGCCCT
GGCATCCGTGGTGTGGGGAG

Downstream 100 bases:

>100_bases
CCCACCAGTTCAAAACCAATGAGAGGAGGCGAAAGATGGATAAAGTGCTGGCTCTGAGTTGGCAACATATCAGCTTGTCG
ATAATGGGAGTTGCGCTGGC

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MRLVLSWTEFLAAKGSSILSATGKHLLLSLGSVLLGTIIAVPLGILLARHQRVAAVMLGISSTIQTIPSLAFFGFVLPFL
GIGIVPAMTVLFLYSILPILRNTYTGIREVNPAYLEAGIGMGMNRRQLLTWIQFPLAFPVIMSGIRVSTVYIISWATLSA
LIGAGGLGDPILAGIHTYDAKLIMAGALPAALLALLASWSLGFVERAVTPRGLRQR

Sequences:

>Translated_216_residues
MRLVLSWTEFLAAKGSSILSATGKHLLLSLGSVLLGTIIAVPLGILLARHQRVAAVMLGISSTIQTIPSLAFFGFVLPFL
GIGIVPAMTVLFLYSILPILRNTYTGIREVNPAYLEAGIGMGMNRRQLLTWIQFPLAFPVIMSGIRVSTVYIISWATLSA
LIGAGGLGDPILAGIHTYDAKLIMAGALPAALLALLASWSLGFVERAVTPRGLRQR
>Mature_216_residues
MRLVLSWTEFLAAKGSSILSATGKHLLLSLGSVLLGTIIAVPLGILLARHQRVAAVMLGISSTIQTIPSLAFFGFVLPFL
GIGIVPAMTVLFLYSILPILRNTYTGIREVNPAYLEAGIGMGMNRRQLLTWIQFPLAFPVIMSGIRVSTVYIISWATLSA
LIGAGGLGDPILAGIHTYDAKLIMAGALPAALLALLASWSLGFVERAVTPRGLRQR

Specific function: Involved in a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine and choline; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1174

COG function: function code E; ABC-type proline/glycine betaine transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788451, Length=210, Percent_Identity=32.3809523809524, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1788449, Length=139, Percent_Identity=36.6906474820144, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1789033, Length=178, Percent_Identity=33.1460674157303, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23023; Mature: 23023

Theoretical pI: Translated: 11.39; Mature: 11.39

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVLSWTEFLAAKGSSILSATGKHLLLSLGSVLLGTIIAVPLGILLARHQRVAAVMLGI
CCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSTIQTIPSLAFFGFVLPFLGIGIVPAMTVLFLYSILPILRNTYTGIREVNPAYLEAGIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
MGMNRRQLLTWIQFPLAFPVIMSGIRVSTVYIISWATLSALIGAGGLGDPILAGIHTYDA
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KLIMAGALPAALLALLASWSLGFVERAVTPRGLRQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRLVLSWTEFLAAKGSSILSATGKHLLLSLGSVLLGTIIAVPLGILLARHQRVAAVMLGI
CCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSTIQTIPSLAFFGFVLPFLGIGIVPAMTVLFLYSILPILRNTYTGIREVNPAYLEAGIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
MGMNRRQLLTWIQFPLAFPVIMSGIRVSTVYIISWATLSALIGAGGLGDPILAGIHTYDA
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KLIMAGALPAALLALLASWSLGFVERAVTPRGLRQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]