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The map label for this gene is ycjC [C]

Identifier: 83590463

GI number: 83590463

Start: 1662685

End: 1663587

Strand: Reverse

Name: ycjC [C]

Synonym: Moth_1627

Alternate gene names: 83590463

Gene position: 1663587-1662685 (Counterclockwise)

Preceding gene: 83590464

Following gene: 83590462

Centisome position: 63.28

GC content: 55.81

Gene sequence:

>903_bases
ATGACCATAGGTGAGAAACTAAAAAAGCTAAGGGAAGATAGGGGAATACCCCTGGAGGAACTGGCCGATCGCCTGGATAT
CGCCCCCGCCTGTATGGTGGAAGTAGAGCAGGGCACCAGGAGGCTGTCCCTGGCCACCCTGAAGGAGGTGGCTGCCATCC
TGGGGGTAGATGTTAGCTATTTTCAAGAGGAAAATGATAACAAGAACGACAACAGCGTAGGCGCCAGGCTACGGCGTTTG
CGGGAGCAAAAGGGCATTACCCTGAGTGAATTGAGCCGCCGTTCTGGGGTTTCCCTGGCCCATATCAGTGAGATCGAACG
CTCGCGCTCGACGGCCTCCCTTAAGACCCTGGAAAAACTGGCCGCCGTCCTGGAGGTTTCAACCAGTTCCCTGTTGCGCT
CCGGCCAGCAGGATTCCCTGGGAGCCAAGCTGAAGCGCCTGCGGGAAAAGATCGGCCTGACCCAGAAGGAGCTGGCCCAG
CAGGTCGGAATTTCCCACAGCCTCATCGGCCAGATTGAGACAGATCGCATCCAGCCTTCCCTGTCCACCCTGAGTAGCCT
GGCCGAGGCCCTGGGGGTTTCTACTTGTTACTTCCTTATGGAGGATGACGAAGAAGATCTCTACCTGGATTATCGCCTGG
AGGCTGATATCCGGGAAGCCCTGCGGCGGCCTTTGCTCCAGCAGGTCGTGCGCGACCTGGCCGGCTGGAGCGACCGGGAG
ATCAAGGGGTTACTAGATTTTGTAAGTATAATGAATGAGGCCCGCCGCCCGCTAAATGACGACGATGAAGAAGAGTACCA
GGAAATAAAGGATTTCATTAGACGCTCTAAGGAAGAAGAGAGGAACCTGGTAGCAAACCTTATCGGGGTACTAAACAAGA
AGCACCAGGAGGATGGAGTGTAG

Upstream 100 bases:

>100_bases
ACGCCCCGTCCAGCCCCGAGTGGGCGCCCAACCTGGTGGCCCTGGCGGCGGGGAACTAAATACGGTAAGCAGCATTGTAG
GGAATTGAGGAGGTCCCGGC

Downstream 100 bases:

>100_bases
TGGACGGGATTATCCTGGATTGCCGGGGGATGACCTGTTCGGGACCCCTGATGGCTACAGCCCAAAAAATGAAGAAATTG
AAGGCCGGGCAACTGCTGGA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; AraC Family Transcriptional Regulator

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTIGEKLKKLREDRGIPLEELADRLDIAPACMVEVEQGTRRLSLATLKEVAAILGVDVSYFQEENDNKNDNSVGARLRRL
REQKGITLSELSRRSGVSLAHISEIERSRSTASLKTLEKLAAVLEVSTSSLLRSGQQDSLGAKLKRLREKIGLTQKELAQ
QVGISHSLIGQIETDRIQPSLSTLSSLAEALGVSTCYFLMEDDEEDLYLDYRLEADIREALRRPLLQQVVRDLAGWSDRE
IKGLLDFVSIMNEARRPLNDDDEEEYQEIKDFIRRSKEEERNLVANLIGVLNKKHQEDGV

Sequences:

>Translated_300_residues
MTIGEKLKKLREDRGIPLEELADRLDIAPACMVEVEQGTRRLSLATLKEVAAILGVDVSYFQEENDNKNDNSVGARLRRL
REQKGITLSELSRRSGVSLAHISEIERSRSTASLKTLEKLAAVLEVSTSSLLRSGQQDSLGAKLKRLREKIGLTQKELAQ
QVGISHSLIGQIETDRIQPSLSTLSSLAEALGVSTCYFLMEDDEEDLYLDYRLEADIREALRRPLLQQVVRDLAGWSDRE
IKGLLDFVSIMNEARRPLNDDDEEEYQEIKDFIRRSKEEERNLVANLIGVLNKKHQEDGV
>Mature_299_residues
TIGEKLKKLREDRGIPLEELADRLDIAPACMVEVEQGTRRLSLATLKEVAAILGVDVSYFQEENDNKNDNSVGARLRRLR
EQKGITLSELSRRSGVSLAHISEIERSRSTASLKTLEKLAAVLEVSTSSLLRSGQQDSLGAKLKRLREKIGLTQKELAQQ
VGISHSLIGQIETDRIQPSLSTLSSLAEALGVSTCYFLMEDDEEDLYLDYRLEADIREALRRPLLQQVVRDLAGWSDREI
KGLLDFVSIMNEARRPLNDDDEEEYQEIKDFIRRSKEEERNLVANLIGVLNKKHQEDGV

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33886; Mature: 33755

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIGEKLKKLREDRGIPLEELADRLDIAPACMVEVEQGTRRLSLATLKEVAAILGVDVSY
CCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
FQEENDNKNDNSVGARLRRLREQKGITLSELSRRSGVSLAHISEIERSRSTASLKTLEKL
HHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AAVLEVSTSSLLRSGQQDSLGAKLKRLREKIGLTQKELAQQVGISHSLIGQIETDRIQPS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCHH
LSTLSSLAEALGVSTCYFLMEDDEEDLYLDYRLEADIREALRRPLLQQVVRDLAGWSDRE
HHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCHH
IKGLLDFVSIMNEARRPLNDDDEEEYQEIKDFIRRSKEEERNLVANLIGVLNKKHQEDGV
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TIGEKLKKLREDRGIPLEELADRLDIAPACMVEVEQGTRRLSLATLKEVAAILGVDVSY
CHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
FQEENDNKNDNSVGARLRRLREQKGITLSELSRRSGVSLAHISEIERSRSTASLKTLEKL
HHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AAVLEVSTSSLLRSGQQDSLGAKLKRLREKIGLTQKELAQQVGISHSLIGQIETDRIQPS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCHH
LSTLSSLAEALGVSTCYFLMEDDEEDLYLDYRLEADIREALRRPLLQQVVRDLAGWSDRE
HHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCHH
IKGLLDFVSIMNEARRPLNDDDEEEYQEIKDFIRRSKEEERNLVANLIGVLNKKHQEDGV
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA