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The map label for this gene is pdtaR [H]

Identifier: 83590143

GI number: 83590143

Start: 1335860

End: 1336486

Strand: Reverse

Name: pdtaR [H]

Synonym: Moth_1295

Alternate gene names: 83590143

Gene position: 1336486-1335860 (Counterclockwise)

Preceding gene: 83590145

Following gene: 83590142

Centisome position: 50.84

GC content: 56.14

Gene sequence:

>627_bases
ATGCAGCAAGCGAAAATCTTTATTGCCTGTGCCGACCCGTCTGCCCGGCAAAACCTGAAGTACATGCTGGTACGTGAGGG
TTACCTCATCGCCGGGGAAGCCCCGGATGGCAGCCAGGCCCTGCGGATGATTCGCACCCTACAGCCCAACCTGGTAATCC
TGGATAGCGATCTCCAGGGCACCAATGCCCTGGAAGTAGCCCGCGTTATCGATGAGGACCGGGTGGCACCGATAATTCTC
CTGGCCTCCTCCTGGCACCGGAACTTGATTATCAGGACCCGCGATTTTCCTGTCTTTGCTTATTTGATTAAACCGGTACA
GGAGAGTACCCTTATCCCGGCAGTAGAAGCCGCCCTGGCCAATTATCGCCGGGTAACCAGGCTGGAGCAGGAGATCAGCA
AGTTGAAGGAAACTCTGGCTTCCCGCAAGGTTGTGGAAAGGGCCAAGGGGATATTAATGGATACCATGGGTTTAACGGAG
GCTGAAGCCTACCGCCGCCTGCAGCGCCAGAGTATGGATCGCTGCGTACCCATGAAAACCATCGCCGAAGCCATTATTGT
CGCCCACGAGCTCCAGCAGGGCGGGCATAAGGCGAAAAATGACAGCGGGAATTCCGGAAGGGCTTAA

Upstream 100 bases:

>100_bases
ATAATAGGTTCCATAATAAATGAAAAAATATTTCGCGGGGCGACGGCGTCCTCGATATAGCTACAACGACGTAGCGCGAG
GGGGGCAGTGAACAAAGTCC

Downstream 100 bases:

>100_bases
GGGTACTGATTAAAATTCGATATGCTCAAGATAGCTGCTTTAGGGCAACGGCGTCCTGAAGGGGAAGGTTACTTATACCC
CTCAGGCGTTATTTTGTATA

Product: response regulator receiver/ANTAR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MQQAKIFIACADPSARQNLKYMLVREGYLIAGEAPDGSQALRMIRTLQPNLVILDSDLQGTNALEVARVIDEDRVAPIIL
LASSWHRNLIIRTRDFPVFAYLIKPVQESTLIPAVEAALANYRRVTRLEQEISKLKETLASRKVVERAKGILMDTMGLTE
AEAYRRLQRQSMDRCVPMKTIAEAIIVAHELQQGGHKAKNDSGNSGRA

Sequences:

>Translated_208_residues
MQQAKIFIACADPSARQNLKYMLVREGYLIAGEAPDGSQALRMIRTLQPNLVILDSDLQGTNALEVARVIDEDRVAPIIL
LASSWHRNLIIRTRDFPVFAYLIKPVQESTLIPAVEAALANYRRVTRLEQEISKLKETLASRKVVERAKGILMDTMGLTE
AEAYRRLQRQSMDRCVPMKTIAEAIIVAHELQQGGHKAKNDSGNSGRA
>Mature_208_residues
MQQAKIFIACADPSARQNLKYMLVREGYLIAGEAPDGSQALRMIRTLQPNLVILDSDLQGTNALEVARVIDEDRVAPIIL
LASSWHRNLIIRTRDFPVFAYLIKPVQESTLIPAVEAALANYRRVTRLEQEISKLKETLASRKVVERAKGILMDTMGLTE
AEAYRRLQRQSMDRCVPMKTIAEAIIVAHELQQGGHKAKNDSGNSGRA

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23236; Mature: 23236

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS50921 ANTAR ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQAKIFIACADPSARQNLKYMLVREGYLIAGEAPDGSQALRMIRTLQPNLVILDSDLQG
CCCCEEEEEECCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCC
TNALEVARVIDEDRVAPIILLASSWHRNLIIRTRDFPVFAYLIKPVQESTLIPAVEAALA
CCHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
NYRRVTRLEQEISKLKETLASRKVVERAKGILMDTMGLTEAEAYRRLQRQSMDRCVPMKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH
IAEAIIVAHELQQGGHKAKNDSGNSGRA
HHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQQAKIFIACADPSARQNLKYMLVREGYLIAGEAPDGSQALRMIRTLQPNLVILDSDLQG
CCCCEEEEEECCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCC
TNALEVARVIDEDRVAPIILLASSWHRNLIIRTRDFPVFAYLIKPVQESTLIPAVEAALA
CCHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
NYRRVTRLEQEISKLKETLASRKVVERAKGILMDTMGLTEAEAYRRLQRQSMDRCVPMKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH
IAEAIIVAHELQQGGHKAKNDSGNSGRA
HHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]