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The map label for this gene is pqqE [H]

Identifier: 83590093

GI number: 83590093

Start: 1285978

End: 1286985

Strand: Reverse

Name: pqqE [H]

Synonym: Moth_1245

Alternate gene names: 83590093

Gene position: 1286985-1285978 (Counterclockwise)

Preceding gene: 83590094

Following gene: 83590092

Centisome position: 48.96

GC content: 62.7

Gene sequence:

>1008_bases
GTGCTTTTATCCTGGAATACGACCAACCAGTGCAATCTTTACTGCGATCACTGCTACCGGGATGCCGGCGCCAGGGTAGA
GGACGAGTTGACCACCGCCGAGGCCGGCAATCTAATAGACGAAGCCGCCAAAGCCGGCTTTAGGATTATGATCTTTAGCG
GCGGCGAACCCCTGCTGCGGCCCGACCTGCCGGAGCTGGTGAGCCGGGCGGCAGCCAGGGGGTTGCGCCCGGTCCTGGGA
AGCAATGGTACCCTCCTCACCACCGAACTGGCCCGAGAATTAAAGGCTGCCGGAGCCCTGGCCGTTGGCATCTCCCTGGA
CAGCTGCGATCCCGCCCGCCACGACCGCCTGCGGCAAAAGGAGGGTGCCTGGCGAAAGGCCGTCGCCGGAATGGCGGCCT
GCCGGGAAGCCGGCCTTCCCTTCCAGGTCCATACAACTGTATTTGATTGGAATCAGGACGAACTGGAAAAACTGACCGAT
CTGGCGGTGGAACTGGGAGCCGTGGCCCATCACTTCTTTTTCCTGGTGCCCACCGGCCGGGCAGCGAGTATCGAAGCCGA
GTCGCTGCGGGCCGCCGAATACGAGGCCACCCTTAAACGCATTTTACAAAAGCAGCAACAGGTGAAGATCGAGTTAAAGC
CTACCTGTGCTCCCCAGTTTATGCGTCTGGCCCGCCAGCTGGGGATACCGGTGCGCTACCAGCGCGGCTGCCTGGCCGGT
ATCGCCTATTGCATCATCAGCCCCCGGGGGGATGTCCAGCCCTGCGCCTACTTGAACCTGCCGGTGGGCAACGTGCGGGA
GGTACCCTTCAGCCAACTCTGGCGGGAGAGCCCGGTCTTCCAGCGCCTGCGCACGGAAGAGTACAGCGGCGGTTGCGGTC
GCTGCGGCTATAAAAAGATATGCGGCGGCTGCCGGGCCCGGGCCTGGTATTATCACGGCGATTATATGGCCGAAGAACCC
TGGTGCCTCTACCAGGGCCGGCAGGACGCGGCGGCGCACGACAATTAA

Upstream 100 bases:

>100_bases
CACCCCTGATAGGGGGAAGGGTGATGGCGGCCACGCTGCCGGACGGGGCACCCCTCCATGGTGGACAGGTCCTGCCGGCA
GTAAGGAGGTTTTATAAGCC

Downstream 100 bases:

>100_bases
ATCCCGCCGTGCGATAATCGGAGAATAAATATTGGGAAGGTGGGATCATCCTTGACTGATTCGGAAGCCTGGCCCCGCTC
GGCAGCCGCCTTTGCCGAGG

Product: radical SAM family protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MLLSWNTTNQCNLYCDHCYRDAGARVEDELTTAEAGNLIDEAAKAGFRIMIFSGGEPLLRPDLPELVSRAAARGLRPVLG
SNGTLLTTELARELKAAGALAVGISLDSCDPARHDRLRQKEGAWRKAVAGMAACREAGLPFQVHTTVFDWNQDELEKLTD
LAVELGAVAHHFFFLVPTGRAASIEAESLRAAEYEATLKRILQKQQQVKIELKPTCAPQFMRLARQLGIPVRYQRGCLAG
IAYCIISPRGDVQPCAYLNLPVGNVREVPFSQLWRESPVFQRLRTEEYSGGCGRCGYKKICGGCRARAWYYHGDYMAEEP
WCLYQGRQDAAAHDN

Sequences:

>Translated_335_residues
MLLSWNTTNQCNLYCDHCYRDAGARVEDELTTAEAGNLIDEAAKAGFRIMIFSGGEPLLRPDLPELVSRAAARGLRPVLG
SNGTLLTTELARELKAAGALAVGISLDSCDPARHDRLRQKEGAWRKAVAGMAACREAGLPFQVHTTVFDWNQDELEKLTD
LAVELGAVAHHFFFLVPTGRAASIEAESLRAAEYEATLKRILQKQQQVKIELKPTCAPQFMRLARQLGIPVRYQRGCLAG
IAYCIISPRGDVQPCAYLNLPVGNVREVPFSQLWRESPVFQRLRTEEYSGGCGRCGYKKICGGCRARAWYYHGDYMAEEP
WCLYQGRQDAAAHDN
>Mature_335_residues
MLLSWNTTNQCNLYCDHCYRDAGARVEDELTTAEAGNLIDEAAKAGFRIMIFSGGEPLLRPDLPELVSRAAARGLRPVLG
SNGTLLTTELARELKAAGALAVGISLDSCDPARHDRLRQKEGAWRKAVAGMAACREAGLPFQVHTTVFDWNQDELEKLTD
LAVELGAVAHHFFFLVPTGRAASIEAESLRAAEYEATLKRILQKQQQVKIELKPTCAPQFMRLARQLGIPVRYQRGCLAG
IAYCIISPRGDVQPCAYLNLPVGNVREVPFSQLWRESPVFQRLRTEEYSGGCGRCGYKKICGGCRARAWYYHGDYMAEEP
WCLYQGRQDAAAHDN

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

Organism=Homo sapiens, GI116734668, Length=159, Percent_Identity=31.4465408805031, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI22027536, Length=159, Percent_Identity=31.4465408805031, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37181; Mature: 37181

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSWNTTNQCNLYCDHCYRDAGARVEDELTTAEAGNLIDEAAKAGFRIMIFSGGEPLLR
CEEECCCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCC
PDLPELVSRAAARGLRPVLGSNGTLLTTELARELKAAGALAVGISLDSCDPARHDRLRQK
CCHHHHHHHHHHCCCCHHHCCCCCEEHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHH
EGAWRKAVAGMAACREAGLPFQVHTTVFDWNQDELEKLTDLAVELGAVAHHFFFLVPTGR
CCHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEEECCC
AASIEAESLRAAEYEATLKRILQKQQQVKIELKPTCAPQFMRLARQLGIPVRYQRGCLAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCEEHHHHHHH
IAYCIISPRGDVQPCAYLNLPVGNVREVPFSQLWRESPVFQRLRTEEYSGGCGRCGYKKI
HHHHEECCCCCCCCCEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHH
CGGCRARAWYYHGDYMAEEPWCLYQGRQDAAAHDN
HCCHHCCEEEEECCCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MLLSWNTTNQCNLYCDHCYRDAGARVEDELTTAEAGNLIDEAAKAGFRIMIFSGGEPLLR
CEEECCCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCC
PDLPELVSRAAARGLRPVLGSNGTLLTTELARELKAAGALAVGISLDSCDPARHDRLRQK
CCHHHHHHHHHHCCCCHHHCCCCCEEHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHH
EGAWRKAVAGMAACREAGLPFQVHTTVFDWNQDELEKLTDLAVELGAVAHHFFFLVPTGR
CCHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEEECCC
AASIEAESLRAAEYEATLKRILQKQQQVKIELKPTCAPQFMRLARQLGIPVRYQRGCLAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCEEHHHHHHH
IAYCIISPRGDVQPCAYLNLPVGNVREVPFSQLWRESPVFQRLRTEEYSGGCGRCGYKKI
HHHHEECCCCCCCCCEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHH
CGGCRARAWYYHGDYMAEEPWCLYQGRQDAAAHDN
HCCHHCCEEEEECCCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA