Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83313503

Identifier: 83313503

GI number: 83313503

Start: 4808478

End: 4808945

Strand: Reverse

Name: 83313503

Synonym: amb4404

Alternate gene names: NA

Gene position: 4808945-4808478 (Counterclockwise)

Preceding gene: 83313504

Following gene: 83313502

Centisome position: 96.82

GC content: 65.81

Gene sequence:

>468_bases
ATGCCGACCAATCGTGTTTTCCTGGTGGTTGTGGACGATTCGCCCGAGATGCAGGCGGCGTTGCGCTTCGCCTGCCGCCG
CGCCCGCTCCTCGGACGGGCAGGTGGCGCTGTTGCGGGTGATCGAGCCCACCGAGTACGAGCATTTCGCCTCCATCGGCA
ATCTGATGCGCGCCGAGGCCCGCGAGGCGGCGGAGGAATTGCTCAACCGTCTGGCCGGCGACGTCAACCAGATGTCAGGC
CATCTTCCGGTGCTTCATGTGCGCGAGGGCAATCCCCGGGACGAACTGATCGCCCTGATTACCGAAGAGCCCTCCATCTC
GGTGCTGGTGCTGGCCGCCGATACCGGGCCGGGTGGTCCGGGGCCACTGGTGACGGCGCTGACGGGGAAATATATCGGCA
AGCTCCGCGTGCCGTTGACCCTGGTTCCCGGCAGCCTGACGGCCGAACAGATCGATGCCATCACCTAG

Upstream 100 bases:

>100_bases
CGGCGGCCTACGGTCTCATCGCCATCGCGCTGGCGGCTCTGGCCGGCTGGCTGGCGGCGGTGGTGTTCAAGAAAGCCTGA
TCATTTCCGGGGAGGACATC

Downstream 100 bases:

>100_bases
GATACGCCCTCAATCGCCGGGCGCCCCGATGAATTCATCGGGACGTCGGTCGGGCTTCATCCTACTCCTTGACTCGGAGA
TAGGCGTCGCCATCTACTAG

Product: universal stress protein UspA-like nucleotide-binding protein

Products: NA

Alternate protein names: UspA Domain-Containing Protein; UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family; UspA Protein; Uspa Domain-Containing Protein

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MPTNRVFLVVVDDSPEMQAALRFACRRARSSDGQVALLRVIEPTEYEHFASIGNLMRAEAREAAEELLNRLAGDVNQMSG
HLPVLHVREGNPRDELIALITEEPSISVLVLAADTGPGGPGPLVTALTGKYIGKLRVPLTLVPGSLTAEQIDAIT

Sequences:

>Translated_155_residues
MPTNRVFLVVVDDSPEMQAALRFACRRARSSDGQVALLRVIEPTEYEHFASIGNLMRAEAREAAEELLNRLAGDVNQMSG
HLPVLHVREGNPRDELIALITEEPSISVLVLAADTGPGGPGPLVTALTGKYIGKLRVPLTLVPGSLTAEQIDAIT
>Mature_154_residues
PTNRVFLVVVDDSPEMQAALRFACRRARSSDGQVALLRVIEPTEYEHFASIGNLMRAEAREAAEELLNRLAGDVNQMSGH
LPVLHVREGNPRDELIALITEEPSISVLVLAADTGPGGPGPLVTALTGKYIGKLRVPLTLVPGSLTAEQIDAIT

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16647; Mature: 16516

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTNRVFLVVVDDSPEMQAALRFACRRARSSDGQVALLRVIEPTEYEHFASIGNLMRAEA
CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
REAAEELLNRLAGDVNQMSGHLPVLHVREGNPRDELIALITEEPSISVLVLAADTGPGGP
HHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCHHHEEEEEECCCCEEEEEEEECCCCCCC
GPLVTALTGKYIGKLRVPLTLVPGSLTAEQIDAIT
CCCHHHHHHHHHCEEECEEEEECCCCCHHHHCCCC
>Mature Secondary Structure 
PTNRVFLVVVDDSPEMQAALRFACRRARSSDGQVALLRVIEPTEYEHFASIGNLMRAEA
CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
REAAEELLNRLAGDVNQMSGHLPVLHVREGNPRDELIALITEEPSISVLVLAADTGPGGP
HHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCHHHEEEEEECCCCEEEEEEEECCCCCCC
GPLVTALTGKYIGKLRVPLTLVPGSLTAEQIDAIT
CCCHHHHHHHHHCEEECEEEEECCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA