| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313503
Identifier: 83313503
GI number: 83313503
Start: 4808478
End: 4808945
Strand: Reverse
Name: 83313503
Synonym: amb4404
Alternate gene names: NA
Gene position: 4808945-4808478 (Counterclockwise)
Preceding gene: 83313504
Following gene: 83313502
Centisome position: 96.82
GC content: 65.81
Gene sequence:
>468_bases ATGCCGACCAATCGTGTTTTCCTGGTGGTTGTGGACGATTCGCCCGAGATGCAGGCGGCGTTGCGCTTCGCCTGCCGCCG CGCCCGCTCCTCGGACGGGCAGGTGGCGCTGTTGCGGGTGATCGAGCCCACCGAGTACGAGCATTTCGCCTCCATCGGCA ATCTGATGCGCGCCGAGGCCCGCGAGGCGGCGGAGGAATTGCTCAACCGTCTGGCCGGCGACGTCAACCAGATGTCAGGC CATCTTCCGGTGCTTCATGTGCGCGAGGGCAATCCCCGGGACGAACTGATCGCCCTGATTACCGAAGAGCCCTCCATCTC GGTGCTGGTGCTGGCCGCCGATACCGGGCCGGGTGGTCCGGGGCCACTGGTGACGGCGCTGACGGGGAAATATATCGGCA AGCTCCGCGTGCCGTTGACCCTGGTTCCCGGCAGCCTGACGGCCGAACAGATCGATGCCATCACCTAG
Upstream 100 bases:
>100_bases CGGCGGCCTACGGTCTCATCGCCATCGCGCTGGCGGCTCTGGCCGGCTGGCTGGCGGCGGTGGTGTTCAAGAAAGCCTGA TCATTTCCGGGGAGGACATC
Downstream 100 bases:
>100_bases GATACGCCCTCAATCGCCGGGCGCCCCGATGAATTCATCGGGACGTCGGTCGGGCTTCATCCTACTCCTTGACTCGGAGA TAGGCGTCGCCATCTACTAG
Product: universal stress protein UspA-like nucleotide-binding protein
Products: NA
Alternate protein names: UspA Domain-Containing Protein; UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family; UspA Protein; Uspa Domain-Containing Protein
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MPTNRVFLVVVDDSPEMQAALRFACRRARSSDGQVALLRVIEPTEYEHFASIGNLMRAEAREAAEELLNRLAGDVNQMSG HLPVLHVREGNPRDELIALITEEPSISVLVLAADTGPGGPGPLVTALTGKYIGKLRVPLTLVPGSLTAEQIDAIT
Sequences:
>Translated_155_residues MPTNRVFLVVVDDSPEMQAALRFACRRARSSDGQVALLRVIEPTEYEHFASIGNLMRAEAREAAEELLNRLAGDVNQMSG HLPVLHVREGNPRDELIALITEEPSISVLVLAADTGPGGPGPLVTALTGKYIGKLRVPLTLVPGSLTAEQIDAIT >Mature_154_residues PTNRVFLVVVDDSPEMQAALRFACRRARSSDGQVALLRVIEPTEYEHFASIGNLMRAEAREAAEELLNRLAGDVNQMSGH LPVLHVREGNPRDELIALITEEPSISVLVLAADTGPGGPGPLVTALTGKYIGKLRVPLTLVPGSLTAEQIDAIT
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16647; Mature: 16516
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTNRVFLVVVDDSPEMQAALRFACRRARSSDGQVALLRVIEPTEYEHFASIGNLMRAEA CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH REAAEELLNRLAGDVNQMSGHLPVLHVREGNPRDELIALITEEPSISVLVLAADTGPGGP HHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCHHHEEEEEECCCCEEEEEEEECCCCCCC GPLVTALTGKYIGKLRVPLTLVPGSLTAEQIDAIT CCCHHHHHHHHHCEEECEEEEECCCCCHHHHCCCC >Mature Secondary Structure PTNRVFLVVVDDSPEMQAALRFACRRARSSDGQVALLRVIEPTEYEHFASIGNLMRAEA CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH REAAEELLNRLAGDVNQMSGHLPVLHVREGNPRDELIALITEEPSISVLVLAADTGPGGP HHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCHHHEEEEEECCCCEEEEEEEECCCCCCC GPLVTALTGKYIGKLRVPLTLVPGSLTAEQIDAIT CCCHHHHHHHHHCEEECEEEEECCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA