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The map label for this gene is yhgI [C]

Identifier: 83313502

GI number: 83313502

Start: 4807794

End: 4808366

Strand: Reverse

Name: yhgI [C]

Synonym: amb4403

Alternate gene names: 83313502

Gene position: 4808366-4807794 (Counterclockwise)

Preceding gene: 83313503

Following gene: 83313501

Centisome position: 96.8

GC content: 66.32

Gene sequence:

>573_bases
GTGCTCCGAAGCGTAAGGACCCCCATGTTCATCCAGACCGAACCCACCCCCAATCCCGCCACCCTGAAGTTCCTTCCCGG
CACCGTGGTGATGGGCCAGGGGACCGCCGATTTCGCCGAGGCCTCGCGGGCTTCGGGCTCGCCGCTCGCCACCCGCCTGT
TCGCCATCGACGGCGTGGGCAGCGTGTTCCTCGGCACCGACTTCATCACCGTGGCCAAGCTCGATGCCGCTGACTGGCAG
GTGGTCAAGCCCCAGGTGCTGGCGGCCATCATGGACCACTACAATTCCGGCGATCCGGTGATCAATCCCGGCTCCGAGGC
GGCGGCCGCGTCGGGCGACGACGATGGCATCGTCATGCAGATCAAGGAGCTGCTGGACACCCGCGTGCGTCCGGCCGTGG
CCCAGGACGGCGGCGACATCATCTTCCGCGCCTTCGAGGACGGCATCGTCTACCTGCACCTGCAGGGCGCCTGTTCCGGC
TGCCCCTCGTCCAGCGCCACCCTGAAGCATGGCATCGAGAACATGCTGAAGTATTATGTTCCCGAGGTGATGGCCGTCCA
GGCGGTGGACTAA

Upstream 100 bases:

>100_bases
AATCGCCGGGCGCCCCGATGAATTCATCGGGACGTCGGTCGGGCTTCATCCTACTCCTTGACTCGGAGATAGGCGTCGCC
ATCTACTAGAGGCAGTTTTC

Downstream 100 bases:

>100_bases
CCGCCTCTTTATTCTCGGTTTAATCGGCATGCCCCGTGGCTCCGGCCCGGGGCATGTTCTGTTTCCGTTCGTATATCAGG
CGGTTTTGGGTTGATTTACC

Product: HIRA-interacting protein 5

Products: NA

Alternate protein names: NifU Domain Protein; Nitrogen-Fixing NifU Domain Protein; NifU Domain-Containing Protein; Nitrogen-Fixing NifU-Like; Nitrogen Fixation Protein; NifU-Like Domain Protein; NifU-Like Protein; NifU Related Protein; NifU-Like Domain-Containing Protein; NifU Protein; Nitrogen-Fixing NifU-Like Protein; Scaffold Protein Nfu/Nifu; NifU Family Protein; Thioredoxin-Like Protein; Nitrogen-Fixing NifU; NifU Iron-Sulphur Cluster Scaffold Protein; Nif System Fes Cluster Assembly Nifu Family Protein; Thioredoxin-Related Protein; Thioredoxin-Like Domain Protein; Scaffold Protein Nfu/NifU N Terminal Domain Protein; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing Protein NifU; Nitrogen-Fixing NifU Domain-Containing Protein; Iron-Sulfur Cluster Assembly Protein; Nitrogen Fixing Thioredoxin-Like Protein NifU; Nitrogen-Fixing Protein; NFU1 Iron-Sulfur Cluster Scaffold-Like Protein; Fe-S Cluster Assembly Protein NFU; Nifu Protein; NifU Domain Containing Protein; HIRA-Interacting; NifU-Like Nitrogen Fixation Protein; Nitrogen-Fixing NifU C-Terminal; Scaffold Protein Nfu/NifU-Like Protein; Scaffold Protein Nfu/NifU N Terminal; NitrogeN-Fixing Nifu Domain Protein; Thioredoxin

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MLRSVRTPMFIQTEPTPNPATLKFLPGTVVMGQGTADFAEASRASGSPLATRLFAIDGVGSVFLGTDFITVAKLDAADWQ
VVKPQVLAAIMDHYNSGDPVINPGSEAAAASGDDDGIVMQIKELLDTRVRPAVAQDGGDIIFRAFEDGIVYLHLQGACSG
CPSSSATLKHGIENMLKYYVPEVMAVQAVD

Sequences:

>Translated_190_residues
MLRSVRTPMFIQTEPTPNPATLKFLPGTVVMGQGTADFAEASRASGSPLATRLFAIDGVGSVFLGTDFITVAKLDAADWQ
VVKPQVLAAIMDHYNSGDPVINPGSEAAAASGDDDGIVMQIKELLDTRVRPAVAQDGGDIIFRAFEDGIVYLHLQGACSG
CPSSSATLKHGIENMLKYYVPEVMAVQAVD
>Mature_190_residues
MLRSVRTPMFIQTEPTPNPATLKFLPGTVVMGQGTADFAEASRASGSPLATRLFAIDGVGSVFLGTDFITVAKLDAADWQ
VVKPQVLAAIMDHYNSGDPVINPGSEAAAASGDDDGIVMQIKELLDTRVRPAVAQDGGDIIFRAFEDGIVYLHLQGACSG
CPSSSATLKHGIENMLKYYVPEVMAVQAVD

Specific function: Unknown

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI50593025, Length=183, Percent_Identity=54.0983606557377, Blast_Score=204, Evalue=4e-53,
Organism=Homo sapiens, GI50593021, Length=183, Percent_Identity=54.0983606557377, Blast_Score=204, Evalue=5e-53,
Organism=Homo sapiens, GI50593023, Length=100, Percent_Identity=55, Blast_Score=120, Evalue=6e-28,
Organism=Homo sapiens, GI50593019, Length=100, Percent_Identity=55, Blast_Score=120, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI17541876, Length=181, Percent_Identity=50.828729281768, Blast_Score=202, Evalue=6e-53,
Organism=Saccharomyces cerevisiae, GI6322811, Length=224, Percent_Identity=34.375, Blast_Score=124, Evalue=9e-30,
Organism=Drosophila melanogaster, GI45551492, Length=189, Percent_Identity=52.9100529100529, Blast_Score=213, Evalue=7e-56,
Organism=Drosophila melanogaster, GI24643765, Length=189, Percent_Identity=52.9100529100529, Blast_Score=213, Evalue=7e-56,
Organism=Drosophila melanogaster, GI45556188, Length=189, Percent_Identity=52.9100529100529, Blast_Score=213, Evalue=7e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20085; Mature: 20085

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSVRTPMFIQTEPTPNPATLKFLPGTVVMGQGTADFAEASRASGSPLATRLFAIDGVG
CCCCCCCCEEEEECCCCCCCEEEEECCEEEEECCCHHHHHHHCCCCCCHHEEEEEECCCC
SVFLGTDFITVAKLDAADWQVVKPQVLAAIMDHYNSGDPVINPGSEAAAASGDDDGIVMQ
CEEECCCEEEEEEECCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH
IKELLDTRVRPAVAQDGGDIIFRAFEDGIVYLHLQGACSGCPSSSATLKHGIENMLKYYV
HHHHHHHHCCCHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC
PEVMAVQAVD
CHHEEEEECC
>Mature Secondary Structure
MLRSVRTPMFIQTEPTPNPATLKFLPGTVVMGQGTADFAEASRASGSPLATRLFAIDGVG
CCCCCCCCEEEEECCCCCCCEEEEECCEEEEECCCHHHHHHHCCCCCCHHEEEEEECCCC
SVFLGTDFITVAKLDAADWQVVKPQVLAAIMDHYNSGDPVINPGSEAAAASGDDDGIVMQ
CEEECCCEEEEEEECCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH
IKELLDTRVRPAVAQDGGDIIFRAFEDGIVYLHLQGACSGCPSSSATLKHGIENMLKYYV
HHHHHHHHCCCHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC
PEVMAVQAVD
CHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA