| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313259
Identifier: 83313259
GI number: 83313259
Start: 4573429
End: 4573992
Strand: Reverse
Name: 83313259
Synonym: amb4160
Alternate gene names: NA
Gene position: 4573992-4573429 (Counterclockwise)
Preceding gene: 83313266
Following gene: 83313258
Centisome position: 92.08
GC content: 62.41
Gene sequence:
>564_bases ATGCTCAGGAGCGGCCGATTGAACCAGCCTTTGACCGAATCCCCCCCGGATGTGGATTACCCGGGCGAACTGCCCGAGTA TTGCGGTGATCTCGGTATCCGCATCGACCGGCAGGGACGTTGGTTCTACCATGGCTCGCCGATCAACCGCAAAGAGATGG TCTGCCTGTTCGCCTCGGTGCTGTACCGGTCCAAGGACGGCGGCTATCTGCTGATCACACCGGGCGAAATGGGCCGCATC GAGGTGGAGGATGTTCCCTTCCTGGCGGTCGAGATGTTCACCTGCGGTGGCGGCCGCGACATGGTGGTCAGCTTTCGCAC CAATATGGACGAGATGGTCACCGTCGACGCCGACCATCCGTTGAGAATTGCCGAAGGGGAGGGCTCGGGGGAGCCGTCGC CCTACGTCACCGTGCGGAACGGGATCGAGGCGCGCCTCACCCGCTCCGTCTATTACGAACTGGTCGCTCAAGGGTGGGAG GAGGACCGGGAGGGAGAAGCGGTTTACGGCCTATGGAGCAGCGGGAGCTTTTTTCCATTGGGGAGGCTGGACCTTCCCGA CTGA
Upstream 100 bases:
>100_bases GCGGGCCTCGGACAGGCGGGATTCGAGGGCGGCGATCTCGTCTTGCGGGGCGGCGGAACTGGTGTGCGGTGTCATGGAAT TGGCGCCTCGCAGGAGAAGA
Downstream 100 bases:
>100_bases CGCGCGAGGTGATCGCGCGACGGCTGACCGACGGGTTCGACCCGGGCGGGCGCTCGGACTCGGCCCTGGAGGCCATGGTC CAGGGCGGCGCCGTGCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MLRSGRLNQPLTESPPDVDYPGELPEYCGDLGIRIDRQGRWFYHGSPINRKEMVCLFASVLYRSKDGGYLLITPGEMGRI EVEDVPFLAVEMFTCGGGRDMVVSFRTNMDEMVTVDADHPLRIAEGEGSGEPSPYVTVRNGIEARLTRSVYYELVAQGWE EDREGEAVYGLWSSGSFFPLGRLDLPD
Sequences:
>Translated_187_residues MLRSGRLNQPLTESPPDVDYPGELPEYCGDLGIRIDRQGRWFYHGSPINRKEMVCLFASVLYRSKDGGYLLITPGEMGRI EVEDVPFLAVEMFTCGGGRDMVVSFRTNMDEMVTVDADHPLRIAEGEGSGEPSPYVTVRNGIEARLTRSVYYELVAQGWE EDREGEAVYGLWSSGSFFPLGRLDLPD >Mature_187_residues MLRSGRLNQPLTESPPDVDYPGELPEYCGDLGIRIDRQGRWFYHGSPINRKEMVCLFASVLYRSKDGGYLLITPGEMGRI EVEDVPFLAVEMFTCGGGRDMVVSFRTNMDEMVTVDADHPLRIAEGEGSGEPSPYVTVRNGIEARLTRSVYYELVAQGWE EDREGEAVYGLWSSGSFFPLGRLDLPD
Specific function: Unknown
COG id: COG3816
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20965; Mature: 20965
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSGRLNQPLTESPPDVDYPGELPEYCGDLGIRIDRQGRWFYHGSPINRKEMVCLFASV CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCEEEECCCCCHHHHHHHHHHH LYRSKDGGYLLITPGEMGRIEVEDVPFLAVEMFTCGGGRDMVVSFRTNMDEMVTVDADHP HHCCCCCCEEEEECCCCCEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCEEEECCCCC LRIAEGEGSGEPSPYVTVRNGIEARLTRSVYYELVAQGWEEDREGEAVYGLWSSGSFFPL EEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC GRLDLPD CCCCCCC >Mature Secondary Structure MLRSGRLNQPLTESPPDVDYPGELPEYCGDLGIRIDRQGRWFYHGSPINRKEMVCLFASV CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCEEEECCCCCHHHHHHHHHHH LYRSKDGGYLLITPGEMGRIEVEDVPFLAVEMFTCGGGRDMVVSFRTNMDEMVTVDADHP HHCCCCCCEEEEECCCCCEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCEEEECCCCC LRIAEGEGSGEPSPYVTVRNGIEARLTRSVYYELVAQGWEEDREGEAVYGLWSSGSFFPL EEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC GRLDLPD CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA