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The map label for this gene is 83313246

Identifier: 83313246

GI number: 83313246

Start: 4554860

End: 4556422

Strand: Reverse

Name: 83313246

Synonym: amb4147

Alternate gene names: NA

Gene position: 4556422-4554860 (Counterclockwise)

Preceding gene: 83313247

Following gene: 83313245

Centisome position: 91.73

GC content: 67.82

Gene sequence:

>1563_bases
TTGAACCGCATTGCCGCTTTCGCGACCGGGCATGCCCGGCTGGCCTGGATCTTGGCGTTGCTGGTCGTGGCGATCGGCTC
GGCCATGGCGGTATGGGCGGTTCGCGAACGCCGCGACGATGAGCGGCTTTCGCGGCTGCGGATCGAGGCCCAGCGCAGCG
GCGTCGAATTGATGTCGCAGACCCTGAACGGCAATATCATGGGGTCGCTCTCTTTGCTCGGCATGACCGACGAGGAGGTT
CGGGGTGACGCCTTGGGAACCTTTCCGCCCAATGGTCCCCGGGTTTCCCGGTTGCTTGAGGCGGTTGGCCGTTCTCATGG
TGCCGAGGGTGTCTTCATCGTTGGCGGGGACGGTCGGATCAGATCGTCGTGGGATATGGGCGGCAAGCCCTCGACGGGGC
TGGATGTTCGCTTCCGGCCCTATTTTCAGACGTCCATGAAGGGCCATGACAACGTCTATGCCGCCGTCAGTCTGGCCCGT
GGCGACCGCGCCCTCTACTTCGCCACTCCGGTGCGCGCCATGGCGGGTCGCAATGCCGAAGCCGTCGGGACGGTGGTGGC
CCGCACCACTTTGTCCCAGGTGGATTCCCTGTTGCAGGGCAGGTCGGACGTGGCGCTGCTGTTGTCCCCCCAGGGCGTGG
TGTTCGCCTCGAATCGCCCGGAATGGATCGGCTTCCTGGCGGGGCAGCCGAATCCGGAGCGCTTGAGCGCCATCCGGGCG
CTCAAGCAGTTTGGCGCCATGTTCGATCGGGCCGAGCCATCGATCCTGCCCTTTGCCGTCGAAGGAGGCGTGGTGGATCT
GGGGGGACGCCGTCATGCCCAGGCAGCCTCCACGGTGACCTGGAACGACCCTTATGGCGACTGGTCCCTGGTGCTGATGG
AAGATCTCACGCGGACCGTGCCGGCCGGCGAGAGCCTTGCGGTGGGATTGGCGACGGCGGCCCTCTTGCTGGTCTTCTGC
GGCCTTGGTCTGAAGATGCTGCACAGTCACCATGCCCAGGTCCTGGCGGCACGGCGCCTGGAAGACTACGCCGCTGCCCA
GGCCGCCGGTGCAGAGCGCAAGACGCGACGGGCCGAATCGGCGCTGCTCTTCCAGCGGGCTCGGTCGACGCGGGAACTGG
CCGACGCCTTCCTGGCCGAGTGCCACCGCATCTTCGGGGCGCTGCAGGGCCTTATTTACGCCGATGACGGCAGCGGAGAC
GGCGTCTTCCATCTGGCGGGGCGCTTCGCCTGTGACGCCGCCACGCCGCCGCTCCTGGCGCCGGGCGAGGGGCTGCTCGG
TCAATGCGTGGCCGAGCGGCAGCCGCGCATTCTCGACGTCAGCGACGCTCAGGCCTGGACCATCCGGTCCGGCCTGGGGA
GCGCCCGGCCGGCGGCGGTGATGATGGCGCCGCTGCTGCTGGACGACGCGGTCCTGGGCGTCGCGGAAATCGCGGTTCTC
GATCCGCCGGACCCCCTGGTGCATGGCCAGTTCATGGAAATGGCGTCGCTGCTGGCCCTCAACCTGGAAATCCAGCGCCG
GCATCGGGGCGCCGTGGCCGACACCCGCGAGGCATTGTCATGA

Upstream 100 bases:

>100_bases
GAACGTGGAAACAGCGGATTTCATATGCCTGAAGGATGGAGTACCTTATCGGGATCCGTGTGTTTCCGGTTGAGAGACCG
CACCAAAGGCCGGGGGCGTT

Downstream 100 bases:

>100_bases
CCTTCCTTCTGAACGCCCTGGAGCGCCTGCGACTGACCACCAAGCTGGTTCTCGGCTTTTCGGTCTTCCTGCTGATGATC
GTCGGCCTGGGCCTCTACAG

Product: C4-dicarboxylate transport sensor protein dctB

Products: NA

Alternate protein names: C4-Dicarboxylate Transport Sensor Protein DctB; Two-Component Hybrid Sensor And Regulator; Sensory Box Sensor Histidine Kinase/Response Regulator

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MNRIAAFATGHARLAWILALLVVAIGSAMAVWAVRERRDDERLSRLRIEAQRSGVELMSQTLNGNIMGSLSLLGMTDEEV
RGDALGTFPPNGPRVSRLLEAVGRSHGAEGVFIVGGDGRIRSSWDMGGKPSTGLDVRFRPYFQTSMKGHDNVYAAVSLAR
GDRALYFATPVRAMAGRNAEAVGTVVARTTLSQVDSLLQGRSDVALLLSPQGVVFASNRPEWIGFLAGQPNPERLSAIRA
LKQFGAMFDRAEPSILPFAVEGGVVDLGGRRHAQAASTVTWNDPYGDWSLVLMEDLTRTVPAGESLAVGLATAALLLVFC
GLGLKMLHSHHAQVLAARRLEDYAAAQAAGAERKTRRAESALLFQRARSTRELADAFLAECHRIFGALQGLIYADDGSGD
GVFHLAGRFACDAATPPLLAPGEGLLGQCVAERQPRILDVSDAQAWTIRSGLGSARPAAVMMAPLLLDDAVLGVAEIAVL
DPPDPLVHGQFMEMASLLALNLEIQRRHRGAVADTREALS

Sequences:

>Translated_520_residues
MNRIAAFATGHARLAWILALLVVAIGSAMAVWAVRERRDDERLSRLRIEAQRSGVELMSQTLNGNIMGSLSLLGMTDEEV
RGDALGTFPPNGPRVSRLLEAVGRSHGAEGVFIVGGDGRIRSSWDMGGKPSTGLDVRFRPYFQTSMKGHDNVYAAVSLAR
GDRALYFATPVRAMAGRNAEAVGTVVARTTLSQVDSLLQGRSDVALLLSPQGVVFASNRPEWIGFLAGQPNPERLSAIRA
LKQFGAMFDRAEPSILPFAVEGGVVDLGGRRHAQAASTVTWNDPYGDWSLVLMEDLTRTVPAGESLAVGLATAALLLVFC
GLGLKMLHSHHAQVLAARRLEDYAAAQAAGAERKTRRAESALLFQRARSTRELADAFLAECHRIFGALQGLIYADDGSGD
GVFHLAGRFACDAATPPLLAPGEGLLGQCVAERQPRILDVSDAQAWTIRSGLGSARPAAVMMAPLLLDDAVLGVAEIAVL
DPPDPLVHGQFMEMASLLALNLEIQRRHRGAVADTREALS
>Mature_520_residues
MNRIAAFATGHARLAWILALLVVAIGSAMAVWAVRERRDDERLSRLRIEAQRSGVELMSQTLNGNIMGSLSLLGMTDEEV
RGDALGTFPPNGPRVSRLLEAVGRSHGAEGVFIVGGDGRIRSSWDMGGKPSTGLDVRFRPYFQTSMKGHDNVYAAVSLAR
GDRALYFATPVRAMAGRNAEAVGTVVARTTLSQVDSLLQGRSDVALLLSPQGVVFASNRPEWIGFLAGQPNPERLSAIRA
LKQFGAMFDRAEPSILPFAVEGGVVDLGGRRHAQAASTVTWNDPYGDWSLVLMEDLTRTVPAGESLAVGLATAALLLVFC
GLGLKMLHSHHAQVLAARRLEDYAAAQAAGAERKTRRAESALLFQRARSTRELADAFLAECHRIFGALQGLIYADDGSGD
GVFHLAGRFACDAATPPLLAPGEGLLGQCVAERQPRILDVSDAQAWTIRSGLGSARPAAVMMAPLLLDDAVLGVAEIAVL
DPPDPLVHGQFMEMASLLALNLEIQRRHRGAVADTREALS

Specific function: Unknown

COG id: COG4191

COG function: function code T; Signal transduction histidine kinase regulating C4-dicarboxylate transport system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55576; Mature: 55576

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIAAFATGHARLAWILALLVVAIGSAMAVWAVRERRDDERLSRLRIEAQRSGVELMSQ
CCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TLNGNIMGSLSLLGMTDEEVRGDALGTFPPNGPRVSRLLEAVGRSHGAEGVFIVGGDGRI
HHCCCEEEEEEEECCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCE
RSSWDMGGKPSTGLDVRFRPYFQTSMKGHDNVYAAVSLARGDRALYFATPVRAMAGRNAE
ECCCCCCCCCCCCCEEEECCCHHHCCCCCCCEEEEEEEECCCEEEEEECCHHHHHCCCCH
AVGTVVARTTLSQVDSLLQGRSDVALLLSPQGVVFASNRPEWIGFLAGQPNPERLSAIRA
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCEEEEECCCCCHHHHHHHHH
LKQFGAMFDRAEPSILPFAVEGGVVDLGGRRHAQAASTVTWNDPYGDWSLVLMEDLTRTV
HHHHHHHHHCCCCCEEEEEECCCEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHC
PAGESLAVGLATAALLLVFCGLGLKMLHSHHAQVLAARRLEDYAAAQAAGAERKTRRAES
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ALLFQRARSTRELADAFLAECHRIFGALQGLIYADDGSGDGVFHLAGRFACDAATPPLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEECCCEEECCCCCCCCC
PGEGLLGQCVAERQPRILDVSDAQAWTIRSGLGSARPAAVMMAPLLLDDAVLGVAEIAVL
CCCCHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEE
DPPDPLVHGQFMEMASLLALNLEIQRRHRGAVADTREALS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure
MNRIAAFATGHARLAWILALLVVAIGSAMAVWAVRERRDDERLSRLRIEAQRSGVELMSQ
CCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TLNGNIMGSLSLLGMTDEEVRGDALGTFPPNGPRVSRLLEAVGRSHGAEGVFIVGGDGRI
HHCCCEEEEEEEECCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCE
RSSWDMGGKPSTGLDVRFRPYFQTSMKGHDNVYAAVSLARGDRALYFATPVRAMAGRNAE
ECCCCCCCCCCCCCEEEECCCHHHCCCCCCCEEEEEEEECCCEEEEEECCHHHHHCCCCH
AVGTVVARTTLSQVDSLLQGRSDVALLLSPQGVVFASNRPEWIGFLAGQPNPERLSAIRA
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCEEEEECCCCCHHHHHHHHH
LKQFGAMFDRAEPSILPFAVEGGVVDLGGRRHAQAASTVTWNDPYGDWSLVLMEDLTRTV
HHHHHHHHHCCCCCEEEEEECCCEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHC
PAGESLAVGLATAALLLVFCGLGLKMLHSHHAQVLAARRLEDYAAAQAAGAERKTRRAES
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ALLFQRARSTRELADAFLAECHRIFGALQGLIYADDGSGDGVFHLAGRFACDAATPPLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEECCCEEECCCCCCCCC
PGEGLLGQCVAERQPRILDVSDAQAWTIRSGLGSARPAAVMMAPLLLDDAVLGVAEIAVL
CCCCHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEE
DPPDPLVHGQFMEMASLLALNLEIQRRHRGAVADTREALS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA