| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is yecO [C]
Identifier: 83313185
GI number: 83313185
Start: 4487864
End: 4488562
Strand: Reverse
Name: yecO [C]
Synonym: amb4086
Alternate gene names: 83313185
Gene position: 4488562-4487864 (Counterclockwise)
Preceding gene: 83313186
Following gene: 83313174
Centisome position: 90.36
GC content: 67.24
Gene sequence:
>699_bases ATGAGCCGCGATACCGTCAAGCACTGGGACGATGCCCGCGCCGCGGCCTATGACAAGCGGGTGCGCGAAGCCATTCCCGG CTATGACGCCCTGCATGTCCTGTCGTGCCAGATCGTCGCCGAGACCACCTCCGGCTCCGGCCGCGCCCTGGTGATCGGGG CGGGGACCGGCGTGGAATGCGTGGCCCTGGCGGAAAGCTGCCCCAATCTTTCCGTGGTGGGGGTGGACCCCTCCAAGGAC ATGCTCGATCACGCCGAGGCCAAGGTGAAGGAGCACAACCTCACCGCCCGGGTGCGGCTCTACCCTTCCAAGGTGGGGGA CCTGCCCAAGTTCGAGCCCTTCGACGCCGCCACCTTGCTGCTGGTCATGCATTTTCTTCCCGATGACGGGGCCAAGAAGT CCCTGCTGGAGGAAATCGCCGCCCATCTGAAGCCGGGTGCGCCGCTGGTTCTGGCCGATCTGTTCGGCACCTGGGACGAT GCCTGGCAGCAGCAGCTGCGCGCCTGGTGGCGCCACCTGCAACTGGCGGCCGGCATTCCCGAGGCCGAGGTGGAGAAGGG CTTCCGTCACGTGGATCGCGACATCTTCCCGCTGACCGAGGCGCGGCTGGCGGAATTGTTGGCCGAAACCGGCTTCGGTC CGCCGGAGCCCTATTTCCGGGCGCTGTGCTTCGGCGGCTGGGTGGCCAGGAAGGCTTAG
Upstream 100 bases:
>100_bases TGGGGGCCCGGTCGCTCAATGTGGCGCTGGCCGCCGCCATCGCCACCGCCGAGGCCCTGAGACGCCTGGACGGATTTCCG CAAGAAGGGAGTGAGGACGC
Downstream 100 bases:
>100_bases GTCCCGCCCAGCAAGCCGTCGATTTCCACCTGGGCCATGGCGCGGTTCGAGCCGTGGATGATGGCGTTGGCGCAATCCAT CAGGGCCTGGGCGGCGCGGC
Product: SAM-dependent methyltransferase
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase Domain-Containing Protein; Methyltransferase; Methyltransferase Superfamily; Aspartate-Semialdehyde Dehydrogenase; Orphan Protein; Methyltransferase Domain Family
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSRDTVKHWDDARAAAYDKRVREAIPGYDALHVLSCQIVAETTSGSGRALVIGAGTGVECVALAESCPNLSVVGVDPSKD MLDHAEAKVKEHNLTARVRLYPSKVGDLPKFEPFDAATLLLVMHFLPDDGAKKSLLEEIAAHLKPGAPLVLADLFGTWDD AWQQQLRAWWRHLQLAAGIPEAEVEKGFRHVDRDIFPLTEARLAELLAETGFGPPEPYFRALCFGGWVARKA
Sequences:
>Translated_232_residues MSRDTVKHWDDARAAAYDKRVREAIPGYDALHVLSCQIVAETTSGSGRALVIGAGTGVECVALAESCPNLSVVGVDPSKD MLDHAEAKVKEHNLTARVRLYPSKVGDLPKFEPFDAATLLLVMHFLPDDGAKKSLLEEIAAHLKPGAPLVLADLFGTWDD AWQQQLRAWWRHLQLAAGIPEAEVEKGFRHVDRDIFPLTEARLAELLAETGFGPPEPYFRALCFGGWVARKA >Mature_231_residues SRDTVKHWDDARAAAYDKRVREAIPGYDALHVLSCQIVAETTSGSGRALVIGAGTGVECVALAESCPNLSVVGVDPSKDM LDHAEAKVKEHNLTARVRLYPSKVGDLPKFEPFDAATLLLVMHFLPDDGAKKSLLEEIAAHLKPGAPLVLADLFGTWDDA WQQQLRAWWRHLQLAAGIPEAEVEKGFRHVDRDIFPLTEARLAELLAETGFGPPEPYFRALCFGGWVARKA
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25448; Mature: 25317
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRDTVKHWDDARAAAYDKRVREAIPGYDALHVLSCQIVAETTSGSGRALVIGAGTGVEC CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEEEEECCCCCCEEEEECCCCCHH VALAESCPNLSVVGVDPSKDMLDHAEAKVKEHNLTARVRLYPSKVGDLPKFEPFDAATLL HHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCCCHHHHHH LVMHFLPDDGAKKSLLEEIAAHLKPGAPLVLADLFGTWDDAWQQQLRAWWRHLQLAAGIP HHHHHCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC EAEVEKGFRHVDRDIFPLTEARLAELLAETGFGPPEPYFRALCFGGWVARKA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SRDTVKHWDDARAAAYDKRVREAIPGYDALHVLSCQIVAETTSGSGRALVIGAGTGVEC CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEEEEECCCCCCEEEEECCCCCHH VALAESCPNLSVVGVDPSKDMLDHAEAKVKEHNLTARVRLYPSKVGDLPKFEPFDAATLL HHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCCCHHHHHH LVMHFLPDDGAKKSLLEEIAAHLKPGAPLVLADLFGTWDDAWQQQLRAWWRHLQLAAGIP HHHHHCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC EAEVEKGFRHVDRDIFPLTEARLAELLAETGFGPPEPYFRALCFGGWVARKA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA