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The map label for this gene is ywnA [H]

Identifier: 83313117

GI number: 83313117

Start: 4426225

End: 4426590

Strand: Reverse

Name: ywnA [H]

Synonym: amb4018

Alternate gene names: 83313117

Gene position: 4426590-4426225 (Counterclockwise)

Preceding gene: 83313120

Following gene: 83313116

Centisome position: 89.12

GC content: 70.22

Gene sequence:

>366_bases
ATGGACGGGCAGGCTTGCACGTCGGAGTGGATCGCCGGCTCGGTCAACACCAACCCCGTGGTGGTGCGCCGCCTGCTGTC
GGCCCTGGCCAAGGCGGGGCTGGTCAGCTCGACGCGGGGCAGCGCCGGCGGATCGGTGCTGGCCCGGCCCGCTGACCGCA
TCTCCCTGCTCGATATCCATCGGGCGGTGGACGAGGAGGAGGAGCCGGCCCTGCACAACCAGCCGCCCAATCCGGCCTGT
CCGGTGGGGCGCAACATCCAGTCGGTGCTGGTCCGGGTCATGGAACGGGCCGATGCCGCCCGCGACGCGGTTCTGTCCAC
CACCAAGCTGTCGGAAGTGGTGGGGGCCTTGAAGGTCGAGGGATAA

Upstream 100 bases:

>100_bases
GTTTCGGCTTGCGAATGGCAACGATGTCTGTTACATATTGCCCATGGCCAAGAACTGTCGTTTCGCCGTCGCCGTCCACA
TCACCTCTCTGCTCGCCACC

Downstream 100 bases:

>100_bases
GCCCCTTTTTTGCGAATTAACGTAACAGTAACAGATACCATTACATCTTAGGAGAGCAGCATGACTTCCATCGCCATCGT
CTTTCATTCCGGCTACGGCC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MDGQACTSEWIAGSVNTNPVVVRRLLSALAKAGLVSSTRGSAGGSVLARPADRISLLDIHRAVDEEEEPALHNQPPNPAC
PVGRNIQSVLVRVMERADAARDAVLSTTKLSEVVGALKVEG

Sequences:

>Translated_121_residues
MDGQACTSEWIAGSVNTNPVVVRRLLSALAKAGLVSSTRGSAGGSVLARPADRISLLDIHRAVDEEEEPALHNQPPNPAC
PVGRNIQSVLVRVMERADAARDAVLSTTKLSEVVGALKVEG
>Mature_121_residues
MDGQACTSEWIAGSVNTNPVVVRRLLSALAKAGLVSSTRGSAGGSVLARPADRISLLDIHRAVDEEEEPALHNQPPNPAC
PVGRNIQSVLVRVMERADAARDAVLSTTKLSEVVGALKVEG

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 12664; Mature: 12664

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGQACTSEWIAGSVNTNPVVVRRLLSALAKAGLVSSTRGSAGGSVLARPADRISLLDIH
CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHH
RAVDEEEEPALHNQPPNPACPVGRNIQSVLVRVMERADAARDAVLSTTKLSEVVGALKVE
HHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
G
C
>Mature Secondary Structure
MDGQACTSEWIAGSVNTNPVVVRRLLSALAKAGLVSSTRGSAGGSVLARPADRISLLDIH
CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHH
RAVDEEEEPALHNQPPNPACPVGRNIQSVLVRVMERADAARDAVLSTTKLSEVVGALKVE
HHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]