| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is magA
Identifier: 83313089
GI number: 83313089
Start: 4400031
End: 4401335
Strand: Reverse
Name: magA
Synonym: amb3990
Alternate gene names: 83313089
Gene position: 4401335-4400031 (Counterclockwise)
Preceding gene: 83313096
Following gene: 83313088
Centisome position: 88.61
GC content: 66.97
Gene sequence:
>1305_bases ATGGAACTGCATCATCCCGAACTGACCTATGCCGCCATCGTCGCCCTGGCCGCCGTGCTGTGCGGCGGGATGATGACGCG CCTGAAGCAGCCGGCCGTCGTCGGCTACATCCTGGCGGGGGTGGTGCTGGGACCCAGCGGCTTCGGGCTGGTGAGCAACC GCGACGCCGTGGCCACCCTGGCCGAGTTCGGCGTGCTGATGCTGCTGTTCGTCATCGGCATGAAGCTGGACATCATCCGC TTTCTCGAAGTGTGGAAGACGGCCATCTTCACCACGGTTCTGCAGATCGCCGGCAGCGTGGGCACGGCCCTGCTGCTGCG TCACGGCCTGGGCTGGAGCCTGGGGCTGGCGGTGGTGCTGGGCTGTGCCGTGGCGGTGTCGTCCACCGCCGTAGTGATCA AGGTGCTGGAATCCTCGGACGAGCTGGACACGCCGGTCGGCCGCACCACCCTTGGCATCCTGATCGCCCAGGACATGGCG GTGGTGCCCATGATGCTGGTGCTGGAATCCTTCGAGACCAAGGCGCTGCTGCCCGCCGACATGGCCCGGGTGGTGCTGTC GGTGCTGTTCCTGGTGCTGCTGTTCTGGTGGCTGTCCAAGCGCCGCATCGACCTGCCGATCACCGCCCGGCTTTCCCGCG ATTCTGACCTTGCCACCCTGTCGACCCTGGCCTGGTGTTTCGGCACCGCCGCCATCTCCGGCGTGCTGGACTTGTCGCCG GCCTATGGCGCCTTCCTGGGCGGCGTGGTGCTGGGCAATTCCGCCCAGCGCGACATGCTGTTGAAGCGTGCCCAGCCCAT CGGCAGCGTGCTGCTGATGGTGTTCTTCCTGTCCATCGGGCTGCTGCTCGACTTCAAGTTCATCTGGAAGAATCTGGGCA CCGTTCTCACCCTGCTGGCCATGGTGACCCTGTTCAAGACGGCGCTGAACGTCACGGCGCTGCGCCTGGCGCGGCAGGAC TGGCCCAGCGCCTTCCTGGCCGGCGTGGCCCTGGCCCAGATCGGCGAGTTCTCGTTCCTGCTGGCCGAGACCGGCAAGGC GGTCAAGCTGATCAGCGCCCAGGAGACCAAGCTGGTGGTGGCGGTCACCGTGCTGTCCCTGGTGCTGTCGCCGTTCTGGC TGTTCACCATGCGGCGCATGCACCGGGTGGCGGCGGTGCATGTCCATTCGTTCCGCGATCTGGTCACGCGGCTGTATGGC GACGAGGCCCGCGCTTTCGCCCGCACCGCGCGGCGGGCCCGTGTGCTGGTGCGGCGTGGTTCCTGGAGGGATGACCCCAA TGCCGGACCTGGCTCTGGAATTTGA
Upstream 100 bases:
>100_bases GCAATACCTGCTTTCGGCATAATTTTTATGCAGCCGTCGTCACATTTCCGCCACATCGGGGCTTTAGACCGGGGGCTGCC TTCGTGATAAGAACGCGTCC
Downstream 100 bases:
>100_bases GATCGGCGGCATCGTCTGCGGCATCGACGAGGTGGGCCGCGGCCCCCTGGCCGGGCCGGTGGTGGCCGCCGCGGTGATCC TCGACCCCGCCCGCCTGCCC
Product: ferrous transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MELHHPELTYAAIVALAAVLCGGMMTRLKQPAVVGYILAGVVLGPSGFGLVSNRDAVATLAEFGVLMLLFVIGMKLDIIR FLEVWKTAIFTTVLQIAGSVGTALLLRHGLGWSLGLAVVLGCAVAVSSTAVVIKVLESSDELDTPVGRTTLGILIAQDMA VVPMMLVLESFETKALLPADMARVVLSVLFLVLLFWWLSKRRIDLPITARLSRDSDLATLSTLAWCFGTAAISGVLDLSP AYGAFLGGVVLGNSAQRDMLLKRAQPIGSVLLMVFFLSIGLLLDFKFIWKNLGTVLTLLAMVTLFKTALNVTALRLARQD WPSAFLAGVALAQIGEFSFLLAETGKAVKLISAQETKLVVAVTVLSLVLSPFWLFTMRRMHRVAAVHVHSFRDLVTRLYG DEARAFARTARRARVLVRRGSWRDDPNAGPGSGI
Sequences:
>Translated_434_residues MELHHPELTYAAIVALAAVLCGGMMTRLKQPAVVGYILAGVVLGPSGFGLVSNRDAVATLAEFGVLMLLFVIGMKLDIIR FLEVWKTAIFTTVLQIAGSVGTALLLRHGLGWSLGLAVVLGCAVAVSSTAVVIKVLESSDELDTPVGRTTLGILIAQDMA VVPMMLVLESFETKALLPADMARVVLSVLFLVLLFWWLSKRRIDLPITARLSRDSDLATLSTLAWCFGTAAISGVLDLSP AYGAFLGGVVLGNSAQRDMLLKRAQPIGSVLLMVFFLSIGLLLDFKFIWKNLGTVLTLLAMVTLFKTALNVTALRLARQD WPSAFLAGVALAQIGEFSFLLAETGKAVKLISAQETKLVVAVTVLSLVLSPFWLFTMRRMHRVAAVHVHSFRDLVTRLYG DEARAFARTARRARVLVRRGSWRDDPNAGPGSGI >Mature_434_residues MELHHPELTYAAIVALAAVLCGGMMTRLKQPAVVGYILAGVVLGPSGFGLVSNRDAVATLAEFGVLMLLFVIGMKLDIIR FLEVWKTAIFTTVLQIAGSVGTALLLRHGLGWSLGLAVVLGCAVAVSSTAVVIKVLESSDELDTPVGRTTLGILIAQDMA VVPMMLVLESFETKALLPADMARVVLSVLFLVLLFWWLSKRRIDLPITARLSRDSDLATLSTLAWCFGTAAISGVLDLSP AYGAFLGGVVLGNSAQRDMLLKRAQPIGSVLLMVFFLSIGLLLDFKFIWKNLGTVLTLLAMVTLFKTALNVTALRLARQD WPSAFLAGVALAQIGEFSFLLAETGKAVKLISAQETKLVVAVTVLSLVLSPFWLFTMRRMHRVAAVHVHSFRDLVTRLYG DEARAFARTARRARVLVRRGSWRDDPNAGPGSGI
Specific function: Unknown
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=368, Percent_Identity=28.5326086956522, Blast_Score=103, Evalue=4e-22, Organism=Escherichia coli, GI1786685, Length=386, Percent_Identity=30.8290155440415, Blast_Score=132, Evalue=4e-32, Organism=Escherichia coli, GI1786232, Length=373, Percent_Identity=28.1501340482574, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1789749, Length=360, Percent_Identity=28.0555555555556, Blast_Score=108, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 46829; Mature: 46829
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELHHPELTYAAIVALAAVLCGGMMTRLKQPAVVGYILAGVVLGPSGFGLVSNRDAVATL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHH AEFGVLMLLFVIGMKLDIIRFLEVWKTAIFTTVLQIAGSVGTALLLRHGLGWSLGLAVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH GCAVAVSSTAVVIKVLESSDELDTPVGRTTLGILIAQDMAVVPMMLVLESFETKALLPAD HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH MARVVLSVLFLVLLFWWLSKRRIDLPITARLSRDSDLATLSTLAWCFGTAAISGVLDLSP HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCH AYGAFLGGVVLGNSAQRDMLLKRAQPIGSVLLMVFFLSIGLLLDFKFIWKNLGTVLTLLA HHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVTLFKTALNVTALRLARQDWPSAFLAGVALAQIGEFSFLLAETGKAVKLISAQETKLVV HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH AVTVLSLVLSPFWLFTMRRMHRVAAVHVHSFRDLVTRLYGDEARAFARTARRARVLVRRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC SWRDDPNAGPGSGI CCCCCCCCCCCCCC >Mature Secondary Structure MELHHPELTYAAIVALAAVLCGGMMTRLKQPAVVGYILAGVVLGPSGFGLVSNRDAVATL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHH AEFGVLMLLFVIGMKLDIIRFLEVWKTAIFTTVLQIAGSVGTALLLRHGLGWSLGLAVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH GCAVAVSSTAVVIKVLESSDELDTPVGRTTLGILIAQDMAVVPMMLVLESFETKALLPAD HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH MARVVLSVLFLVLLFWWLSKRRIDLPITARLSRDSDLATLSTLAWCFGTAAISGVLDLSP HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCH AYGAFLGGVVLGNSAQRDMLLKRAQPIGSVLLMVFFLSIGLLLDFKFIWKNLGTVLTLLA HHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVTLFKTALNVTALRLARQDWPSAFLAGVALAQIGEFSFLLAETGKAVKLISAQETKLVV HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH AVTVLSLVLSPFWLFTMRRMHRVAAVHVHSFRDLVTRLYGDEARAFARTARRARVLVRRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC SWRDDPNAGPGSGI CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 7721718 [H]