| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is ccrMIM [H]
Identifier: 83313087
GI number: 83313087
Start: 4398261
End: 4399337
Strand: Reverse
Name: ccrMIM [H]
Synonym: amb3988
Alternate gene names: 83313087
Gene position: 4399337-4398261 (Counterclockwise)
Preceding gene: 83313088
Following gene: 83313086
Centisome position: 88.57
GC content: 65.09
Gene sequence:
>1077_bases ATGACCCTGCCTCTCAACACCATTCTCTCCGGCGACTGCATCGCCATGATGAACTCCCTGCCCGCCGGTTCGGTGGATCT GATCTTCGCGGATCCGCCCTATAACCTGCAGCTGGGCGGCGAGCTTCTGCGTCCCAACAACTCCAAGGTGGAGGGTGTGG ACGAGGAGTGGGACCGCTTCTCGGATTTCGCGGCCTATGACAGCTTCACCCGCGACTGGCTGAAGGCGGCGCGCCGGGTG CTGAAGGACGATGGCGGGCTGTGGGTGATCGGCAGCTACCACAACATCTTCCGCGTCGGCTCGATCCTCCAGGATCTGGG GTTCTGGATGCTGAACGACATCGTCTGGCGCAAGAGCAATCCCATGCCCAATTTCAAGGGCACCCGCTTCACCAACGCCC ACGAGACCATGATCTGGTGCGCCAAGTCGTCGGACTCCCGCTACACCTTCAACTACGACACCATGAAGGCGCTGAACGAC GATCTGCAGATGCGCAGCGACTGGACCTTGCCGCTGTGCACCGGGGGCGAGCGCCTGAGGAATGCCGGGCGCAAGACCCA TCCCACCCAGAAGCCGGAATCCCTGCTGTACCGCGTCATCATGGCCTCGACCAAGCCGGGCGACGTGGTGCTGGACCCCT TCTTCGGCACCGGCACCACCGGGGCGGTGGCCAAGAAGCTGGGCCGCAACTTCATCGGCTGCGAGCGTGATCCCGAATAC ATCGCCGCCGCCAAGGATCGCATCGCCAAGGTGATTCCGGTGGCCGATCCCTCCTTGCTGCTGACGCCGTCCAAGCGGGC CGAGCCGCGGGTTCCGTTCGGCACCGTGCTGGAGCGCGGGCTGCTCACCGCCGGCGACCTGCTGTTCGGCGGCACCCGGC ACGACAAGGTCGCCAAGGTGCGGGCCGACGGCACCCTGATCACCGATGACCATCGCGGCTCGATTCACAAGGTGGGCGCC CTGGTCCAGGGCGCGCCGGCCTGCAACGGCTGGACCTACTGGCACTTCCAGGCTTCGTCCGAGGACTTCCTGCCCATCGA CGTGCTGCGCCAGAAGATCCGGGCAGAGCTGCATTGA
Upstream 100 bases:
>100_bases CACTACCTGTGGCAATGAATCATTAGATTCCAACAGGTTCTTGACGGACTCTCATGTTTGACTCAAATTGAGTGCTCCAA CTCATTTGAATCGGTCCGCC
Downstream 100 bases:
>100_bases TGCAGATGAACCATGGGTCCAGCGGCATCCTGCCGCCATTGCCCTTAGGCCCGGGCGGACCACGGTCCGCAGGGAGGCGG CGGCCAAGCGCCCGGAGGGG
Product: modification methylase CcrMI
Products: NA
Alternate protein names: M.CcrMI; Adenine-specific methyltransferase CcrMI [H]
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MTLPLNTILSGDCIAMMNSLPAGSVDLIFADPPYNLQLGGELLRPNNSKVEGVDEEWDRFSDFAAYDSFTRDWLKAARRV LKDDGGLWVIGSYHNIFRVGSILQDLGFWMLNDIVWRKSNPMPNFKGTRFTNAHETMIWCAKSSDSRYTFNYDTMKALND DLQMRSDWTLPLCTGGERLRNAGRKTHPTQKPESLLYRVIMASTKPGDVVLDPFFGTGTTGAVAKKLGRNFIGCERDPEY IAAAKDRIAKVIPVADPSLLLTPSKRAEPRVPFGTVLERGLLTAGDLLFGGTRHDKVAKVRADGTLITDDHRGSIHKVGA LVQGAPACNGWTYWHFQASSEDFLPIDVLRQKIRAELH
Sequences:
>Translated_358_residues MTLPLNTILSGDCIAMMNSLPAGSVDLIFADPPYNLQLGGELLRPNNSKVEGVDEEWDRFSDFAAYDSFTRDWLKAARRV LKDDGGLWVIGSYHNIFRVGSILQDLGFWMLNDIVWRKSNPMPNFKGTRFTNAHETMIWCAKSSDSRYTFNYDTMKALND DLQMRSDWTLPLCTGGERLRNAGRKTHPTQKPESLLYRVIMASTKPGDVVLDPFFGTGTTGAVAKKLGRNFIGCERDPEY IAAAKDRIAKVIPVADPSLLLTPSKRAEPRVPFGTVLERGLLTAGDLLFGGTRHDKVAKVRADGTLITDDHRGSIHKVGA LVQGAPACNGWTYWHFQASSEDFLPIDVLRQKIRAELH >Mature_357_residues TLPLNTILSGDCIAMMNSLPAGSVDLIFADPPYNLQLGGELLRPNNSKVEGVDEEWDRFSDFAAYDSFTRDWLKAARRVL KDDGGLWVIGSYHNIFRVGSILQDLGFWMLNDIVWRKSNPMPNFKGTRFTNAHETMIWCAKSSDSRYTFNYDTMKALNDD LQMRSDWTLPLCTGGERLRNAGRKTHPTQKPESLLYRVIMASTKPGDVVLDPFFGTGTTGAVAKKLGRNFIGCERDPEYI AAAKDRIAKVIPVADPSLLLTPSKRAEPRVPFGTVLERGLLTAGDLLFGGTRHDKVAKVRADGTLITDDHRGSIHKVGAL VQGAPACNGWTYWHFQASSEDFLPIDVLRQKIRAELH
Specific function: This methylase recognizes the double-stranded sequence GANTC and causes specific methylation on A-2 on both strands. Ccrm-mediated methylation has important cellular functions. Appears to contribute to the accurate cell-cycle control of DNA replication an
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI87082238, Length=266, Percent_Identity=33.4586466165414, Blast_Score=118, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR002052 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 39917; Mature: 39786
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPLNTILSGDCIAMMNSLPAGSVDLIFADPPYNLQLGGELLRPNNSKVEGVDEEWDRF CCCCCHHHHCCCHHHHHHCCCCCCEEEEECCCCCCEEECCEEECCCCCCCCCCCHHHHHH SDFAAYDSFTRDWLKAARRVLKDDGGLWVIGSYHNIFRVGSILQDLGFWMLNDIVWRKSN HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC PMPNFKGTRFTNAHETMIWCAKSSDSRYTFNYDTMKALNDDLQMRSDWTLPLCTGGERLR CCCCCCCCEECCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHCCCCCCEEECCHHHHH NAGRKTHPTQKPESLLYRVIMASTKPGDVVLDPFFGTGTTGAVAKKLGRNFIGCERDPEY HCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCCHHH IAAAKDRIAKVIPVADPSLLLTPSKRAEPRVPFGTVLERGLLTAGDLLFGGTRHDKVAKV HHHHHHHHHEEEECCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCHHEECCCCCCCEEEE RADGTLITDDHRGSIHKVGALVQGAPACNGWTYWHFQASSEDFLPIDVLRQKIRAELH ECCCCEEECCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TLPLNTILSGDCIAMMNSLPAGSVDLIFADPPYNLQLGGELLRPNNSKVEGVDEEWDRF CCCCHHHHCCCHHHHHHCCCCCCEEEEECCCCCCEEECCEEECCCCCCCCCCCHHHHHH SDFAAYDSFTRDWLKAARRVLKDDGGLWVIGSYHNIFRVGSILQDLGFWMLNDIVWRKSN HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC PMPNFKGTRFTNAHETMIWCAKSSDSRYTFNYDTMKALNDDLQMRSDWTLPLCTGGERLR CCCCCCCCEECCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHCCCCCCEEECCHHHHH NAGRKTHPTQKPESLLYRVIMASTKPGDVVLDPFFGTGTTGAVAKKLGRNFIGCERDPEY HCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCCHHH IAAAKDRIAKVIPVADPSLLLTPSKRAEPRVPFGTVLERGLLTAGDLLFGGTRHDKVAKV HHHHHHHHHEEEECCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCHHEECCCCCCCEEEE RADGTLITDDHRGSIHKVGALVQGAPACNGWTYWHFQASSEDFLPIDVLRQKIRAELH ECCCCEEECCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8289276 [H]