Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83312759

Identifier: 83312759

GI number: 83312759

Start: 4022680

End: 4024194

Strand: Reverse

Name: 83312759

Synonym: amb3660

Alternate gene names: NA

Gene position: 4024194-4022680 (Counterclockwise)

Preceding gene: 83312760

Following gene: 83312756

Centisome position: 81.02

GC content: 63.17

Gene sequence:

>1515_bases
ATGCCCAGTCTGCTACTGATCAATCCGAGGTTCCCCGAAAGCTTCTGGAGCTTCAGATGGGCCATTGATCATGTGTTGCC
GGGCAAGAAGGCGGTGAATCCCCCCCTCGGCCTGGCAACGCTGGCGGCGCTGTGCCCCGCCCTTTGGCGGGTCGAGATCA
TCGACGAAAACATCGAACCGATTCCCCCGACCACCGACGCCGACATCGTCGGTGTATGCGGTATGGGCGTTCAGTTCGAG
CGCCAGCGGGAATTGCTGGCCCATTACCGCGACCAAGGCCATTACGTGGTTGCGGGCGGCAGCTACGCCTCGCTGTGTCC
CGATGAGTATACCGAGGCGGCCGACACGGTGGTGGCCGGCGAGGCCGAATACGTGTGGCCGGAATTCTGCCGCGACTTCG
AGGCAGGGACACCAAAGCCCCTGTACCACGAGACCGGAACGGTGGCGTTAGCGGACACTCCGGTTCCCCGCTACGATTTG
CTTCGCCTAGGGGCCTATTCCAACGTCACCCTCCAGTTCTCGCGCGGCTGTCCCTTCCGGTGCGAGTTCTGCGACATCAT
CGTGATGTTTGGCCGGCGCCCCCGGGTCAAGGACCTGGATCAGATCGAGAAGGAGTTGGATCAGTTGCGCCGCTTCGGCG
CCCGCAGCGTATTTTTCGTCGACGACAACCTGATCGGCAATCCGAAGGAGGCCAAGGACCTGCTGCGTTTCCTGGCCGAG
TACCAGCGGCATCACGGCTACATGTTCAGCTTCGGCACCGAGGCGTCGCTCAACATGGCCCAGGACGACGAATTGCTGGA
GCTGTTCCGCGCCGCCAATTTCGGCTGGGTGTTCATCGGCATCGAGACGACCGATCCGGTGGGGTTGAAGGAAACCGGCA
AGACCCAGAACCTGCGGGAAGACACCCTGACGGCCATCCGGCGCATCTATTCCCACGGCATCGATGTGCTGGGCGGGTTT
ATCATCGGCTTCGACCACGACACCCTGGACACCTTCGAGCATCAGTACCGCTTCATCACTGACGCCGGAATCCAGTCGGC
CATGATCGGTCTGCTCATGGCGCTGCCGCGTACCCCGCTGCACGCGCGGATGGAGCGGGAAGGCCGCCTGCTGCCCGTCG
AAAGACATTCGGACAACACCAGCCTGACCACCAACATCGTGCCGAAATGCATGACCGCCGAAGCCATGGCGGCGGGCTAC
CAGATGCTTTACGGCCGCCTGCTCACCGGCCCGGAAATCGGGCGGCGTATCCGCAACAAGGCGGCGTATCTGCGCGTCCC
GGTCTATGGCAGCGGCTATCCCATGGGCCAGCGGGTCGGTATCGTCGTCCGCCTGCTGGTCAGGGGCATCCTGTCGGGGG
GGCTTACGACCATGGTGCCGTTCCTGCGCAGCTTCCCCTTCCTCACGCCGTCACGCATTCCCATGGTTATTTCCGACTGG
ATCATCGGCCTGTCCATGAAAGCCTTCGCCGAACGGCACCTGACAGGTACCGCCCGGCGGCGGGAGGCGGACTGA

Upstream 100 bases:

>100_bases
TCAAGGTGGGCGGGCGCGAGCGGATACGCAGCGACACCCTTGAAGTGATACTCCCCTTCTTCAGCAGCGCGTTGCCGGAG
TAAGGGAACAGGAGACGCGG

Downstream 100 bases:

>100_bases
ATCCGGGCTTATTCCGGCTTTGGCGGCGGCGGGCCGGTGACGCGGGGCGGCTTCTTACCCATACGGCTGTCGTCGGTAAA
GAGCGATGCCGCTTGCGACG

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: ORF N [H]

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MPSLLLINPRFPESFWSFRWAIDHVLPGKKAVNPPLGLATLAALCPALWRVEIIDENIEPIPPTTDADIVGVCGMGVQFE
RQRELLAHYRDQGHYVVAGGSYASLCPDEYTEAADTVVAGEAEYVWPEFCRDFEAGTPKPLYHETGTVALADTPVPRYDL
LRLGAYSNVTLQFSRGCPFRCEFCDIIVMFGRRPRVKDLDQIEKELDQLRRFGARSVFFVDDNLIGNPKEAKDLLRFLAE
YQRHHGYMFSFGTEASLNMAQDDELLELFRAANFGWVFIGIETTDPVGLKETGKTQNLREDTLTAIRRIYSHGIDVLGGF
IIGFDHDTLDTFEHQYRFITDAGIQSAMIGLLMALPRTPLHARMEREGRLLPVERHSDNTSLTTNIVPKCMTAEAMAAGY
QMLYGRLLTGPEIGRRIRNKAAYLRVPVYGSGYPMGQRVGIVVRLLVRGILSGGLTTMVPFLRSFPFLTPSRIPMVISDW
IIGLSMKAFAERHLTGTARRREAD

Sequences:

>Translated_504_residues
MPSLLLINPRFPESFWSFRWAIDHVLPGKKAVNPPLGLATLAALCPALWRVEIIDENIEPIPPTTDADIVGVCGMGVQFE
RQRELLAHYRDQGHYVVAGGSYASLCPDEYTEAADTVVAGEAEYVWPEFCRDFEAGTPKPLYHETGTVALADTPVPRYDL
LRLGAYSNVTLQFSRGCPFRCEFCDIIVMFGRRPRVKDLDQIEKELDQLRRFGARSVFFVDDNLIGNPKEAKDLLRFLAE
YQRHHGYMFSFGTEASLNMAQDDELLELFRAANFGWVFIGIETTDPVGLKETGKTQNLREDTLTAIRRIYSHGIDVLGGF
IIGFDHDTLDTFEHQYRFITDAGIQSAMIGLLMALPRTPLHARMEREGRLLPVERHSDNTSLTTNIVPKCMTAEAMAAGY
QMLYGRLLTGPEIGRRIRNKAAYLRVPVYGSGYPMGQRVGIVVRLLVRGILSGGLTTMVPFLRSFPFLTPSRIPMVISDW
IIGLSMKAFAERHLTGTARRREAD
>Mature_503_residues
PSLLLINPRFPESFWSFRWAIDHVLPGKKAVNPPLGLATLAALCPALWRVEIIDENIEPIPPTTDADIVGVCGMGVQFER
QRELLAHYRDQGHYVVAGGSYASLCPDEYTEAADTVVAGEAEYVWPEFCRDFEAGTPKPLYHETGTVALADTPVPRYDLL
RLGAYSNVTLQFSRGCPFRCEFCDIIVMFGRRPRVKDLDQIEKELDQLRRFGARSVFFVDDNLIGNPKEAKDLLRFLAEY
QRHHGYMFSFGTEASLNMAQDDELLELFRAANFGWVFIGIETTDPVGLKETGKTQNLREDTLTAIRRIYSHGIDVLGGFI
IGFDHDTLDTFEHQYRFITDAGIQSAMIGLLMALPRTPLHARMEREGRLLPVERHSDNTSLTTNIVPKCMTAEAMAAGYQ
MLYGRLLTGPEIGRRIRNKAAYLRVPVYGSGYPMGQRVGIVVRLLVRGILSGGLTTMVPFLRSFPFLTPSRIPMVISDWI
IGLSMKAFAERHLTGTARRREAD

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 56672; Mature: 56541

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLLLINPRFPESFWSFRWAIDHVLPGKKAVNPPLGLATLAALCPALWRVEIIDENIEP
CCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCC
IPPTTDADIVGVCGMGVQFERQRELLAHYRDQGHYVVAGGSYASLCPDEYTEAADTVVAG
CCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHCCCHHHHHHHHHEEEC
EAEYVWPEFCRDFEAGTPKPLYHETGTVALADTPVPRYDLLRLGAYSNVTLQFSRGCPFR
CCCCCCHHHHHHCCCCCCCCCEECCCEEEEECCCCCHHHHHHCCCCCCEEEEECCCCCCE
CEFCDIIVMFGRRPRVKDLDQIEKELDQLRRFGARSVFFVDDNLIGNPKEAKDLLRFLAE
EHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHH
YQRHHGYMFSFGTEASLNMAQDDELLELFRAANFGWVFIGIETTDPVGLKETGKTQNLRE
HHHHCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHH
DTLTAIRRIYSHGIDVLGGFIIGFDHDTLDTFEHQYRFITDAGIQSAMIGLLMALPRTPL
HHHHHHHHHHHCCHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
HARMEREGRLLPVERHSDNTSLTTNIVPKCMTAEAMAAGYQMLYGRLLTGPEIGRRIRNK
HHHHHCCCCEEEEECCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
AAYLRVPVYGSGYPMGQRVGIVVRLLVRGILSGGLTTMVPFLRSFPFLTPSRIPMVISDW
CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHH
IIGLSMKAFAERHLTGTARRREAD
HHHHHHHHHHHHHHCCCCHHCCCC
>Mature Secondary Structure 
PSLLLINPRFPESFWSFRWAIDHVLPGKKAVNPPLGLATLAALCPALWRVEIIDENIEP
CCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCC
IPPTTDADIVGVCGMGVQFERQRELLAHYRDQGHYVVAGGSYASLCPDEYTEAADTVVAG
CCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHCCCHHHHHHHHHEEEC
EAEYVWPEFCRDFEAGTPKPLYHETGTVALADTPVPRYDLLRLGAYSNVTLQFSRGCPFR
CCCCCCHHHHHHCCCCCCCCCEECCCEEEEECCCCCHHHHHHCCCCCCEEEEECCCCCCE
CEFCDIIVMFGRRPRVKDLDQIEKELDQLRRFGARSVFFVDDNLIGNPKEAKDLLRFLAE
EHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHH
YQRHHGYMFSFGTEASLNMAQDDELLELFRAANFGWVFIGIETTDPVGLKETGKTQNLRE
HHHHCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHH
DTLTAIRRIYSHGIDVLGGFIIGFDHDTLDTFEHQYRFITDAGIQSAMIGLLMALPRTPL
HHHHHHHHHHHCCHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
HARMEREGRLLPVERHSDNTSLTTNIVPKCMTAEAMAAGYQMLYGRLLTGPEIGRRIRNK
HHHHHCCCCEEEEECCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
AAYLRVPVYGSGYPMGQRVGIVVRLLVRGILSGGLTTMVPFLRSFPFLTPSRIPMVISDW
CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHH
IIGLSMKAFAERHLTGTARRREAD
HHHHHHHHHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231; 8467083 [H]