| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is cysW [H]
Identifier: 83312664
GI number: 83312664
Start: 3919793
End: 3920665
Strand: Reverse
Name: cysW [H]
Synonym: amb3565
Alternate gene names: 83312664
Gene position: 3920665-3919793 (Counterclockwise)
Preceding gene: 83312665
Following gene: 83312662
Centisome position: 78.93
GC content: 68.61
Gene sequence:
>873_bases ATGATTCCCGCCATGGCCGTTCACCACGTTCCCCGCCGTCGTCCCGGCGGTGCCCGGCGCGCCCTGCTGATCGGGCTGGC CGGGCTGCTGGCCCTGGGCTTCCTGATGGTGCCCATGGCGGTGATCTTCGCCCAGGCCCTGTCCAAGGGCTGGGCGGCGT GGTGGGCGGCGGTCAGCCATCCCGAGACCCTGCACGCCATCGGCCTGTCCCTGGTGGTGGTGGCGGTGGTGGTGCCCGTC AACGCCGTCTACGGGCTGGCGGTGGCCTGGGCAGTGACCAAGTTCCGCTTCAAGGGCAAGAAATGGCTGGTGGCCCTGGT GGAGGCGCCGTTCTCGGTGTCGCCCATCGTCGCCGGCGTCGCCGCCCTGATGGTCTATGGCGGCTCCGGCCTGCTGGGAC CCTGGCTGGAGGAGCACGACATCAAGGTGATGTTCGCGCTGCCGGGCATCGTCATCGCCACCCTGTTCGTCACCAGCCCG TTCATCGCCCGCGAGCTTTTGCCGCTGATGCAGCTGCAGGGCACCGATGACGAGGAAGCCGCCCTGACCCTGGGGGCGGG GGGGCTGTCCATCTTCCTGCGGGTGACGCTGCCCAACGTCAAATGGGCGCTGTTTTACGGCATCATCCTTTGCGCCGCCC GTTCGCTGGGCGAATTCGGCGCCGTCTCGGTGGTGTCGGGCCAGGTGCGGGGCGAGACCATGACCCTGCCGCTGCAGATC GATCTGCTGTATCACGACTATGACAGTTCGGGGGCCTTCGCCGCGGCGTCGGTGCTGACCCTGCTGGCCCTGGTGACCCT GGGGCTGAAGCTGCTGGTCGAGCGCTTCTACGACCGCGAGATCGAGGACACCCTGGCCGAGCGCCAGGGATGA
Upstream 100 bases:
>100_bases GCCATCGCCACCGTGGTGCTGGCCTTCGCCTTCGTCACCATGCTGCTGACCAACGGCATCCAGGCCTGGCAGCAGCGCTA CCTGGCAAAGGGGTGAGACG
Downstream 100 bases:
>100_bases TCAGGCCTGGCCCCCGGGCAAGGTGAAGCGGAACCTCGATCCCTCTCCGGGCACTGATTCCACCCAGATTCGGCCGCCGT GATGCTCGACGATCTTGCGG
Product: ABC-type sulfate transport system, permease component
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MIPAMAVHHVPRRRPGGARRALLIGLAGLLALGFLMVPMAVIFAQALSKGWAAWWAAVSHPETLHAIGLSLVVVAVVVPV NAVYGLAVAWAVTKFRFKGKKWLVALVEAPFSVSPIVAGVAALMVYGGSGLLGPWLEEHDIKVMFALPGIVIATLFVTSP FIARELLPLMQLQGTDDEEAALTLGAGGLSIFLRVTLPNVKWALFYGIILCAARSLGEFGAVSVVSGQVRGETMTLPLQI DLLYHDYDSSGAFAAASVLTLLALVTLGLKLLVERFYDREIEDTLAERQG
Sequences:
>Translated_290_residues MIPAMAVHHVPRRRPGGARRALLIGLAGLLALGFLMVPMAVIFAQALSKGWAAWWAAVSHPETLHAIGLSLVVVAVVVPV NAVYGLAVAWAVTKFRFKGKKWLVALVEAPFSVSPIVAGVAALMVYGGSGLLGPWLEEHDIKVMFALPGIVIATLFVTSP FIARELLPLMQLQGTDDEEAALTLGAGGLSIFLRVTLPNVKWALFYGIILCAARSLGEFGAVSVVSGQVRGETMTLPLQI DLLYHDYDSSGAFAAASVLTLLALVTLGLKLLVERFYDREIEDTLAERQG >Mature_290_residues MIPAMAVHHVPRRRPGGARRALLIGLAGLLALGFLMVPMAVIFAQALSKGWAAWWAAVSHPETLHAIGLSLVVVAVVVPV NAVYGLAVAWAVTKFRFKGKKWLVALVEAPFSVSPIVAGVAALMVYGGSGLLGPWLEEHDIKVMFALPGIVIATLFVTSP FIARELLPLMQLQGTDDEEAALTLGAGGLSIFLRVTLPNVKWALFYGIILCAARSLGEFGAVSVVSGQVRGETMTLPLQI DLLYHDYDSSGAFAAASVLTLLALVTLGLKLLVERFYDREIEDTLAERQG
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=268, Percent_Identity=50, Blast_Score=279, Evalue=2e-76, Organism=Escherichia coli, GI1788764, Length=215, Percent_Identity=36.2790697674419, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1786980, Length=225, Percent_Identity=30.6666666666667, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30965; Mature: 30965
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPAMAVHHVPRRRPGGARRALLIGLAGLLALGFLMVPMAVIFAQALSKGWAAWWAAVSH CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PETLHAIGLSLVVVAVVVPVNAVYGLAVAWAVTKFRFKGKKWLVALVEAPFSVSPIVAGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCHHHHHHH AALMVYGGSGLLGPWLEEHDIKVMFALPGIVIATLFVTSPFIARELLPLMQLQGTDDEEA HHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHH ALTLGAGGLSIFLRVTLPNVKWALFYGIILCAARSLGEFGAVSVVSGQVRGETMTLPLQI EEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEE DLLYHDYDSSGAFAAASVLTLLALVTLGLKLLVERFYDREIEDTLAERQG EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure MIPAMAVHHVPRRRPGGARRALLIGLAGLLALGFLMVPMAVIFAQALSKGWAAWWAAVSH CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PETLHAIGLSLVVVAVVVPVNAVYGLAVAWAVTKFRFKGKKWLVALVEAPFSVSPIVAGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCHHHHHHH AALMVYGGSGLLGPWLEEHDIKVMFALPGIVIATLFVTSPFIARELLPLMQLQGTDDEEA HHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHH ALTLGAGGLSIFLRVTLPNVKWALFYGIILCAARSLGEFGAVSVVSGQVRGETMTLPLQI EEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEE DLLYHDYDSSGAFAAASVLTLLALVTLGLKLLVERFYDREIEDTLAERQG EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]