Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is serB [C]

Identifier: 83312578

GI number: 83312578

Start: 3823587

End: 3824483

Strand: Reverse

Name: serB [C]

Synonym: amb3479

Alternate gene names: 83312578

Gene position: 3824483-3823587 (Counterclockwise)

Preceding gene: 83312582

Following gene: 83312573

Centisome position: 77.0

GC content: 67.22

Gene sequence:

>897_bases
ATGATCAACGTTCTGACCCTGATCGCCGGACATGGCGGAGAGGGCCTCGATTCCTCGCTGGTCTTCGAGGTGCGCGGCGC
GCTGAGGGCACTGGGCGCCGAAGTGGGCCACGCCCGCTGGCTGAGCCCCGAACACGCCTGCGACCTGGATTTCTCCGAGC
TGGACCCGCGTCAGGCCGATCAGGTGGCGGCCCGCATCCTGGAGGGCTGGAACGTGGACGTGGTCGCCCAGAAGGCCGAG
GGGCGGCGCAAGATGCTGCTGGTCGCCGACATGGATTCCACCATGGTCATCGGCGAGACCCTGGACGAACTGGCCGACTT
CGCCGGGCTGAAGGATCACATCGCGCGCATCACCGCACGCGCCATGAATGGCGAGATCGGCTTCGAGGCGGCTCTGCGCG
AGCGCGTCGGCCTGCTCAAGGATCTGCCGGAAGAGTGTCTGCAAAAGACCTGGGACCGCATCGAATTCACCCCGGGCGCC
CACAAGCTGGTGCGGACCATGGTCAAGCACGGCGCCCATGCCGTGCTGGTGTCGGGCGGCTTCAAGTTCTTTACCTCCAA
GGTCCGCGATGCCTGCGGCTTCCACCGCGACATCGCCAATGAGCTGATTGTCGAGAATGGTCGACTGACCGGTCAGGTCG
GCGACACCATCATAGGCCGCGAGGCCAAGCTGGCCACCCTGAACGCCGTGTCGGCGGAGTTGGGCATCACGCCCGAGCTG
GCGGTTTCGGTGGGTGACGGCGCCAACGACCTGGACATGCTGCGCGCCGCCGGGCTGGGCGTCGCCTTCCACGCCAAGCC
GGTGGTGGCCGCCGAGGCCCGGGTGCGGGTCGACCACGGCGATCTGGTCACCCTGCTCTACGCCCAGGGCTATGCCGACG
ACGAGATGGTGGAGTAG

Upstream 100 bases:

>100_bases
TATCCCTCGCCAAGGCATCAGCCAAGGGCTTCCTGCTTGCCAAGCCGTGTTGCGGTGCAGTAAACGGGACCGTTTTTCCT
CCTCTCCTCAAGGACGCGCC

Downstream 100 bases:

>100_bases
TCCGGCAGGCGGTCGGGATCGGCCAGCAGGTAGATTCCGCCGATGCGTCCCCCGATGCAGCCGAAGGTCAGTGCCCAGCG
GACGTCGCCCTTCGTCTCGC

Product: phosphoserine phosphatase

Products: NA

Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MINVLTLIAGHGGEGLDSSLVFEVRGALRALGAEVGHARWLSPEHACDLDFSELDPRQADQVAARILEGWNVDVVAQKAE
GRRKMLLVADMDSTMVIGETLDELADFAGLKDHIARITARAMNGEIGFEAALRERVGLLKDLPEECLQKTWDRIEFTPGA
HKLVRTMVKHGAHAVLVSGGFKFFTSKVRDACGFHRDIANELIVENGRLTGQVGDTIIGREAKLATLNAVSAELGITPEL
AVSVGDGANDLDMLRAAGLGVAFHAKPVVAAEARVRVDHGDLVTLLYAQGYADDEMVE

Sequences:

>Translated_298_residues
MINVLTLIAGHGGEGLDSSLVFEVRGALRALGAEVGHARWLSPEHACDLDFSELDPRQADQVAARILEGWNVDVVAQKAE
GRRKMLLVADMDSTMVIGETLDELADFAGLKDHIARITARAMNGEIGFEAALRERVGLLKDLPEECLQKTWDRIEFTPGA
HKLVRTMVKHGAHAVLVSGGFKFFTSKVRDACGFHRDIANELIVENGRLTGQVGDTIIGREAKLATLNAVSAELGITPEL
AVSVGDGANDLDMLRAAGLGVAFHAKPVVAAEARVRVDHGDLVTLLYAQGYADDEMVE
>Mature_298_residues
MINVLTLIAGHGGEGLDSSLVFEVRGALRALGAEVGHARWLSPEHACDLDFSELDPRQADQVAARILEGWNVDVVAQKAE
GRRKMLLVADMDSTMVIGETLDELADFAGLKDHIARITARAMNGEIGFEAALRERVGLLKDLPEECLQKTWDRIEFTPGA
HKLVRTMVKHGAHAVLVSGGFKFFTSKVRDACGFHRDIANELIVENGRLTGQVGDTIIGREAKLATLNAVSAELGITPEL
AVSVGDGANDLDMLRAAGLGVAFHAKPVVAAEARVRVDHGDLVTLLYAQGYADDEMVE

Specific function: Unknown

COG id: COG0560

COG function: function code E; Phosphoserine phosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

Organism=Escherichia coli, GI1790849, Length=202, Percent_Identity=41.5841584158416, Blast_Score=152, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI115534456, Length=186, Percent_Identity=30.6451612903226, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI115534454, Length=194, Percent_Identity=29.8969072164948, Blast_Score=68, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6321647, Length=230, Percent_Identity=35.2173913043478, Blast_Score=134, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24661601, Length=236, Percent_Identity=25.8474576271186, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006383
- InterPro:   IPR023190
- InterPro:   IPR004469 [H]

Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]

EC number: =3.1.3.3 [H]

Molecular weight: Translated: 32082; Mature: 32082

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINVLTLIAGHGGEGLDSSLVFEVRGALRALGAEVGHARWLSPEHACDLDFSELDPRQAD
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHCCCCHHH
QVAARILEGWNVDVVAQKAEGRRKMLLVADMDSTMVIGETLDELADFAGLKDHIARITAR
HHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCEEHHHHHHHHHHHCCHHHHHHHHHHH
AMNGEIGFEAALRERVGLLKDLPEECLQKTWDRIEFTPGAHKLVRTMVKHGAHAVLVSGG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCEEEEECC
FKFFTSKVRDACGFHRDIANELIVENGRLTGQVGDTIIGREAKLATLNAVSAELGITPEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHCCCCCCEEEHHHHHHHCCCCHHE
AVSVGDGANDLDMLRAAGLGVAFHAKPVVAAEARVRVDHGDLVTLLYAQGYADDEMVE
EEEECCCCCHHHHHHHHCCCEEEECCCEEEECEEEEECCCCEEEEEEECCCCCHHCCC
>Mature Secondary Structure
MINVLTLIAGHGGEGLDSSLVFEVRGALRALGAEVGHARWLSPEHACDLDFSELDPRQAD
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHCCCCHHH
QVAARILEGWNVDVVAQKAEGRRKMLLVADMDSTMVIGETLDELADFAGLKDHIARITAR
HHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCEEHHHHHHHHHHHCCHHHHHHHHHHH
AMNGEIGFEAALRERVGLLKDLPEECLQKTWDRIEFTPGAHKLVRTMVKHGAHAVLVSGG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCEEEEECC
FKFFTSKVRDACGFHRDIANELIVENGRLTGQVGDTIIGREAKLATLNAVSAELGITPEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHCCCCCCEEEHHHHHHHCCCCHHE
AVSVGDGANDLDMLRAAGLGVAFHAKPVVAAEARVRVDHGDLVTLLYAQGYADDEMVE
EEEECCCCCHHHHHHHHCCCEEEECCCEEEECEEEEECCCCEEEEEEECCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]