Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is yfeJ [H]

Identifier: 83312572

GI number: 83312572

Start: 3815942

End: 3816643

Strand: Reverse

Name: yfeJ [H]

Synonym: amb3473

Alternate gene names: 83312572

Gene position: 3816643-3815942 (Counterclockwise)

Preceding gene: 83312573

Following gene: 83312571

Centisome position: 76.84

GC content: 69.09

Gene sequence:

>702_bases
ATGAAGACCTGTGTCGCCATTCGCCATGTGGCGTTCGAGGACCTGGGCAGCTTTCAGGCGCCGCTGGAGGCCGCCGGCTA
TGCCATCCGCTATGCCGAGGCGGGCCTCGATGACCTGGCCGCCCTCTCGGAGGCGTCCACGGACCTGCTGGTGGTCCTGG
GCGGCCCCATCGGCGCCTACGAGGACGGCAACTACCCCTTTCTGGCCCCTGAGCTGCGGCTGATCGAGGCGCGGCTGCGG
GCCGGGCGTCCCACCATCGGCATCTGCCTGGGAGCCCAACTGATGGCGCGCGCCCTGGGCGCCCGCGTCTATTCCAACAA
CGGCGTCAAGGAAATCGGCTGGTCGGCCCTGGATCTGACCGGGGCGGGGCTGACGTCGCCCCTGGCGTCCCTGGACGGCG
TTCCGGTGCTGCACTGGCACGGCGACACCTTCGACCTGCCCGAGGGCGCCGCGCTGCTGGCCTCCACCGCCGTCACCCGC
AACCAGGCGTTTTCCTGGGGCAAGGCCGCTCTGGGCCTGCAATTTCATGTGGAGGCCACCGGGGCAGGGCTGGAGCGCTG
GTATATCGGCCATGCCTGTGAGATCGGCTCGGTGCCGGGCCTGTCGGTGCCTCGATTGCGCGCCGACGCGGCCCGTCACG
CCGCCGGGCTGGAATTGGTCGCCCCGAAGGTGCTGAGTGCGTTTTTGTCTGATATGATGTAA

Upstream 100 bases:

>100_bases
AAGTCAGCCTCGACGCCGGAGGCCCGCTCGGGTATGAAGGGGCCTCGGCCTGGGAGGGCTGGGGCCTGGGAGGGCCGATC
GCGGTTTCCGGCGGGGGATG

Downstream 100 bases:

>100_bases
CCGGCGTCGCCTCGGGTTCCCGCCTGTTCAGGGCGGATGAAGCGATGTATAGTCCGCCGAAAGGGGCATAGAGAAGACAG
CCGTGGACCAGAAGCTCAAC

Product: glutamine amidotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MKTCVAIRHVAFEDLGSFQAPLEAAGYAIRYAEAGLDDLAALSEASTDLLVVLGGPIGAYEDGNYPFLAPELRLIEARLR
AGRPTIGICLGAQLMARALGARVYSNNGVKEIGWSALDLTGAGLTSPLASLDGVPVLHWHGDTFDLPEGAALLASTAVTR
NQAFSWGKAALGLQFHVEATGAGLERWYIGHACEIGSVPGLSVPRLRADAARHAAGLELVAPKVLSAFLSDMM

Sequences:

>Translated_233_residues
MKTCVAIRHVAFEDLGSFQAPLEAAGYAIRYAEAGLDDLAALSEASTDLLVVLGGPIGAYEDGNYPFLAPELRLIEARLR
AGRPTIGICLGAQLMARALGARVYSNNGVKEIGWSALDLTGAGLTSPLASLDGVPVLHWHGDTFDLPEGAALLASTAVTR
NQAFSWGKAALGLQFHVEATGAGLERWYIGHACEIGSVPGLSVPRLRADAARHAAGLELVAPKVLSAFLSDMM
>Mature_233_residues
MKTCVAIRHVAFEDLGSFQAPLEAAGYAIRYAEAGLDDLAALSEASTDLLVVLGGPIGAYEDGNYPFLAPELRLIEARLR
AGRPTIGICLGAQLMARALGARVYSNNGVKEIGWSALDLTGAGLTSPLASLDGVPVLHWHGDTFDLPEGAALLASTAVTR
NQAFSWGKAALGLQFHVEATGAGLERWYIGHACEIGSVPGLSVPRLRADAARHAAGLELVAPKVLSAFLSDMM

Specific function: Unknown

COG id: COG0518

COG function: function code F; GMP synthase - Glutamine amidotransferase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR000991 [H]

Pfam domain/function: PF00117 GATase [H]

EC number: NA

Molecular weight: Translated: 24392; Mature: 24392

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS00442 GATASE_TYPE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTCVAIRHVAFEDLGSFQAPLEAAGYAIRYAEAGLDDLAALSEASTDLLVVLGGPIGAY
CCHHHHHHHHHHHHHCCCCCCHHHHCEEEEEHHCCHHHHHHHHCCCCCEEEEECCCCCCC
EDGNYPFLAPELRLIEARLRAGRPTIGICLGAQLMARALGARVYSNNGVKEIGWSALDLT
CCCCCCEECHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEC
GAGLTSPLASLDGVPVLHWHGDTFDLPEGAALLASTAVTRNQAFSWGKAALGLQFHVEAT
CCCCCCHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEC
GAGLERWYIGHACEIGSVPGLSVPRLRADAARHAAGLELVAPKVLSAFLSDMM
CCCCHHEEECCEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTCVAIRHVAFEDLGSFQAPLEAAGYAIRYAEAGLDDLAALSEASTDLLVVLGGPIGAY
CCHHHHHHHHHHHHHCCCCCCHHHHCEEEEEHHCCHHHHHHHHCCCCCEEEEECCCCCCC
EDGNYPFLAPELRLIEARLRAGRPTIGICLGAQLMARALGARVYSNNGVKEIGWSALDLT
CCCCCCEECHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEC
GAGLTSPLASLDGVPVLHWHGDTFDLPEGAALLASTAVTRNQAFSWGKAALGLQFHVEAT
CCCCCCHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEC
GAGLERWYIGHACEIGSVPGLSVPRLRADAARHAAGLELVAPKVLSAFLSDMM
CCCCHHEEECCEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7612925; 11677609 [H]