Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83312570

Identifier: 83312570

GI number: 83312570

Start: 3813549

End: 3814715

Strand: Reverse

Name: 83312570

Synonym: amb3471

Alternate gene names: NA

Gene position: 3814715-3813549 (Counterclockwise)

Preceding gene: 83312571

Following gene: 83312567

Centisome position: 76.8

GC content: 63.32

Gene sequence:

>1167_bases
ATGTCCGGCAGCGCGAAGCCCGCGGCCAAGCCGCTCGACAAGGACGCGGCCAACCGCAAGGAAATCATCGCCACCATCAA
GGGGCCGGTGACCGCCCGGGTCACCCAGCTGATCCCCGCGCTGGCGGCGTTTCCCAATCCCTATGCCGCCGTGCTGGCCA
CCCCGGACCTGCTTTACGCCTGCATGCAGCTGGTCAAGACCAAGCGCGAGCAGTTCCAGGACCTGCTGATCGACCGGAAT
GGCGACCCGGTCACCACCGATGACGGCATGCTGCGCTGCGAGCGCTCGCTCAATCAGGTGATTTCCATGGTGGTGCGCTC
CGGCGCCAAGGCCTATGCGGAAAAGCGCTTCGGCACCGCCGACAAGCCCGCCGCGCCGGTGGCTCCCAAGAAGGAGCCCA
AGACCCTGCTGGAGAAGATCCAGTCCCTGGTGTCGGGCAAGTGGGGCGACATGGAAGTCCCCAAGTCGTCACCCACCCAG
GCCGACCAGTTCTATGGTGCCATCAAGGATTACCTGGACTACGACTGGCAGGTGCCGCTGATCCCCTGCTTCGCCGAACT
GCCGGTCAAGCTGATCCGCGAGATGGGCCTGGGCGTCACCACGCTGCGCACGCCGGAGGGCATCGCCGCCCTGGCCGATA
TCGGCCGCCACTCCATGGATTCGGCCAAGCGCATCCTGTCGGACGCCATGATGCGCGAAATGCTCGATACCCAGCCCCTC
GCCGCCAAGGGCGTCGCTTTCCTGGGCAAGGACCGCTACGACTACCTGCACGGCACCGTCTACGACAAGATGGGCGAGAA
ATTCTGGGAAATGTGCGTCGATTGCGACCGTCTGGAAGCCATGGAGGTCCAGAACGCCAAGGACCTGGAGCAGTTGGCCA
GCCACCTGCACATCCTGTCGGGCGAGGCCATCAACCAGATCGTGCGCTTCCTCAATTACTCGCAGATTCCGATCTTCCTG
GAAATCGGCACGGAAAAGCTGGGCGAGGAAAAGTTCACCGAGATCTTCGGCGTGCCCGGCAACAAGAAGCTGATCAAGAT
CTTCTGCGAGAAGATCAAGCTGTGGAAGCTGGACCAGGAAGATCCGGATTCCGATCTGCGCGCCAAGCTGCCCGACGTGT
TCGGGGCCTATCTGCGCGCCCCCGCCGACTTCGAAAAGGGGTTGTAG

Upstream 100 bases:

>100_bases
TTCGAGAACGACGACCTGGAATATCTGCTGTCCAAGATGAATCAATTGCCGGCCACCATGCTCGGCGAGTGACGTCGGGA
CCATTCACAAGGGGAATACC

Downstream 100 bases:

>100_bases
GCCTTCGGGCCGGGGCGGGGGAGGTCTTCGGCCCGCCGCCACGACGCCGGCACCGTTGCTACGGCCGGTTGGCGGGCAAG
CGCATCAGTCCGAACCAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MSGSAKPAAKPLDKDAANRKEIIATIKGPVTARVTQLIPALAAFPNPYAAVLATPDLLYACMQLVKTKREQFQDLLIDRN
GDPVTTDDGMLRCERSLNQVISMVVRSGAKAYAEKRFGTADKPAAPVAPKKEPKTLLEKIQSLVSGKWGDMEVPKSSPTQ
ADQFYGAIKDYLDYDWQVPLIPCFAELPVKLIREMGLGVTTLRTPEGIAALADIGRHSMDSAKRILSDAMMREMLDTQPL
AAKGVAFLGKDRYDYLHGTVYDKMGEKFWEMCVDCDRLEAMEVQNAKDLEQLASHLHILSGEAINQIVRFLNYSQIPIFL
EIGTEKLGEEKFTEIFGVPGNKKLIKIFCEKIKLWKLDQEDPDSDLRAKLPDVFGAYLRAPADFEKGL

Sequences:

>Translated_388_residues
MSGSAKPAAKPLDKDAANRKEIIATIKGPVTARVTQLIPALAAFPNPYAAVLATPDLLYACMQLVKTKREQFQDLLIDRN
GDPVTTDDGMLRCERSLNQVISMVVRSGAKAYAEKRFGTADKPAAPVAPKKEPKTLLEKIQSLVSGKWGDMEVPKSSPTQ
ADQFYGAIKDYLDYDWQVPLIPCFAELPVKLIREMGLGVTTLRTPEGIAALADIGRHSMDSAKRILSDAMMREMLDTQPL
AAKGVAFLGKDRYDYLHGTVYDKMGEKFWEMCVDCDRLEAMEVQNAKDLEQLASHLHILSGEAINQIVRFLNYSQIPIFL
EIGTEKLGEEKFTEIFGVPGNKKLIKIFCEKIKLWKLDQEDPDSDLRAKLPDVFGAYLRAPADFEKGL
>Mature_387_residues
SGSAKPAAKPLDKDAANRKEIIATIKGPVTARVTQLIPALAAFPNPYAAVLATPDLLYACMQLVKTKREQFQDLLIDRNG
DPVTTDDGMLRCERSLNQVISMVVRSGAKAYAEKRFGTADKPAAPVAPKKEPKTLLEKIQSLVSGKWGDMEVPKSSPTQA
DQFYGAIKDYLDYDWQVPLIPCFAELPVKLIREMGLGVTTLRTPEGIAALADIGRHSMDSAKRILSDAMMREMLDTQPLA
AKGVAFLGKDRYDYLHGTVYDKMGEKFWEMCVDCDRLEAMEVQNAKDLEQLASHLHILSGEAINQIVRFLNYSQIPIFLE
IGTEKLGEEKFTEIFGVPGNKKLIKIFCEKIKLWKLDQEDPDSDLRAKLPDVFGAYLRAPADFEKGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43155; Mature: 43024

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSAKPAAKPLDKDAANRKEIIATIKGPVTARVTQLIPALAAFPNPYAAVLATPDLLYA
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHH
CMQLVKTKREQFQDLLIDRNGDPVTTDDGMLRCERSLNQVISMVVRSGAKAYAEKRFGTA
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DKPAAPVAPKKEPKTLLEKIQSLVSGKWGDMEVPKSSPTQADQFYGAIKDYLDYDWQVPL
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH
IPCFAELPVKLIREMGLGVTTLRTPEGIAALADIGRHSMDSAKRILSDAMMREMLDTQPL
HHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AAKGVAFLGKDRYDYLHGTVYDKMGEKFWEMCVDCDRLEAMEVQNAKDLEQLASHLHILS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHC
GEAINQIVRFLNYSQIPIFLEIGTEKLGEEKFTEIFGVPGNKKLIKIFCEKIKLWKLDQE
CHHHHHHHHHHCCCCCEEEEEECCHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
DPDSDLRAKLPDVFGAYLRAPADFEKGL
CCCCHHHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure 
SGSAKPAAKPLDKDAANRKEIIATIKGPVTARVTQLIPALAAFPNPYAAVLATPDLLYA
CCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHH
CMQLVKTKREQFQDLLIDRNGDPVTTDDGMLRCERSLNQVISMVVRSGAKAYAEKRFGTA
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DKPAAPVAPKKEPKTLLEKIQSLVSGKWGDMEVPKSSPTQADQFYGAIKDYLDYDWQVPL
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH
IPCFAELPVKLIREMGLGVTTLRTPEGIAALADIGRHSMDSAKRILSDAMMREMLDTQPL
HHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AAKGVAFLGKDRYDYLHGTVYDKMGEKFWEMCVDCDRLEAMEVQNAKDLEQLASHLHILS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHC
GEAINQIVRFLNYSQIPIFLEIGTEKLGEEKFTEIFGVPGNKKLIKIFCEKIKLWKLDQE
CHHHHHHHHHHCCCCCEEEEEECCHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
DPDSDLRAKLPDVFGAYLRAPADFEKGL
CCCCHHHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA