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The map label for this gene is 83312525

Identifier: 83312525

GI number: 83312525

Start: 3754664

End: 3755020

Strand: Reverse

Name: 83312525

Synonym: amb3426

Alternate gene names: NA

Gene position: 3755020-3754664 (Counterclockwise)

Preceding gene: 83312526

Following gene: 83312522

Centisome position: 75.6

GC content: 66.95

Gene sequence:

>357_bases
ATGAAGCTTCAGCTTGCCGCCTTCGCCGCAGCCTTGGCCCTGGCCGGTACCGCTCTGGCCGCCGAGCCGCCGGCCGCTTT
TTCGGCCTGCAAGACCTGTCACAAGGTGGAAGCCGGCGCCAACGGCATCGGTCCCAGCCTGCACGGCGTGGCCGGGTCCA
AGGCCGGCACCGCCGCGGCGGGATTCAAGTACTCGCCGGCTCTGACCGGCTGGGGCAAGTCCTGGGACGACGCCAATCTG
GCGGCCTACATCGCCAATCCCAAGGACACCATCCCCGGCAACAAGATGGTGTTCGCCGGCCTCAAGAACCCAGCGGACGT
CTCCGCCATGGTCGAGTACCTGAAGACCCTGAAGTAG

Upstream 100 bases:

>100_bases
GCGCCAGAGCCTGGCCAAGGAGATGCCTGACCTGTTGTGACAAAGCGCAAATGATGCTTTTCTTGGCGGTACCAACAAAC
GTATTAGGGGGACCATTCCG

Downstream 100 bases:

>100_bases
TCGGGCGACGCGGGGGCGGATCTACCGCCCCCGCGCTTCCTCGGCCGCGTGGGCGGCGGCGGCGCGGGCGTGATGCCCCG
CCACCATCTTGCGGATCACC

Product: cytochrome C2, iso-2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MKLQLAAFAAALALAGTALAAEPPAAFSACKTCHKVEAGANGIGPSLHGVAGSKAGTAAAGFKYSPALTGWGKSWDDANL
AAYIANPKDTIPGNKMVFAGLKNPADVSAMVEYLKTLK

Sequences:

>Translated_118_residues
MKLQLAAFAAALALAGTALAAEPPAAFSACKTCHKVEAGANGIGPSLHGVAGSKAGTAAAGFKYSPALTGWGKSWDDANL
AAYIANPKDTIPGNKMVFAGLKNPADVSAMVEYLKTLK
>Mature_118_residues
MKLQLAAFAAALALAGTALAAEPPAAFSACKTCHKVEAGANGIGPSLHGVAGSKAGTAAAGFKYSPALTGWGKSWDDANL
AAYIANPKDTIPGNKMVFAGLKNPADVSAMVEYLKTLK

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=87, Percent_Identity=41.3793103448276, Blast_Score=73, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17539604, Length=88, Percent_Identity=43.1818181818182, Blast_Score=79, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17566554, Length=89, Percent_Identity=40.4494382022472, Blast_Score=75, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6320796, Length=88, Percent_Identity=38.6363636363636, Blast_Score=80, Evalue=9e-17,
Organism=Saccharomyces cerevisiae, GI6322508, Length=112, Percent_Identity=37.5, Blast_Score=80, Evalue=1e-16,
Organism=Drosophila melanogaster, GI17137228, Length=90, Percent_Identity=46.6666666666667, Blast_Score=86, Evalue=5e-18,
Organism=Drosophila melanogaster, GI17137204, Length=92, Percent_Identity=44.5652173913043, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11863; Mature: 11863

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQLAAFAAALALAGTALAAEPPAAFSACKTCHKVEAGANGIGPSLHGVAGSKAGTAAA
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
GFKYSPALTGWGKSWDDANLAAYIANPKDTIPGNKMVFAGLKNPADVSAMVEYLKTLK
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKLQLAAFAAALALAGTALAAEPPAAFSACKTCHKVEAGANGIGPSLHGVAGSKAGTAAA
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
GFKYSPALTGWGKSWDDANLAAYIANPKDTIPGNKMVFAGLKNPADVSAMVEYLKTLK
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 221822 [H]