Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83312509

Identifier: 83312509

GI number: 83312509

Start: 3704877

End: 3705686

Strand: Reverse

Name: 83312509

Synonym: amb3410

Alternate gene names: NA

Gene position: 3705686-3704877 (Counterclockwise)

Preceding gene: 83312510

Following gene: 83312504

Centisome position: 74.6

GC content: 68.89

Gene sequence:

>810_bases
ATGAACATCAAGGACATTCTCGTCCATCTGGACGGCGACAAGGTGGATAGCGGCACTCTGGCCCTGGCGGTGGCCCAGGC
GCAGCGCTTCGGCGCGCGGCTGACCGGCCTGTTCGCGCGCAAGGAAATCAGCCCCACCGCCATGGTCGCCCGCCATCCCA
GCAACACCTTGCTGGCCCAGGCCGACGCCGCCCGCCAGGCCTTCGAGGCGGCGACCGCCGGCCTCGAAACCCGCTGGTGG
CAGATCGTCCACGGCGCCGAGACCGATCTGCTGGGCGAGGCGGTGTTCTGCAGCCACTACGTGGACCTGGTGATCGTCTC
CCAGCCCGCCGCCTACGGCAAGAACGTGCCCGAGACCATGGTCGAGCAGATCATCCTCAATTCCGGCCGCCCCGTCCTGG
TGGTGCCCGTGGAATACACCCATCGCCCCCTGGGCAAGAAGGTGGTCATCGGCTGGCGTTCGGGCAAGCAGGCGGCACGC
GCCCTGCACGATTGCCTCCCCCTGGTGGAAGGCGCCGACGAGGTGCTGGTCGCCTCGGTGCGCGGCTTCGCCCCCATGGA
TTCCACCACGCCCCGGGTCGACGTCATCGACCATCTGCGCGTCCACGGCCTGCCCGTCCACGGCGAGCGGGTCAATACCG
AGGGCCTCGGCATCATGGACTCCCTGCTGTCGCGGGCCTACGACATCGATGCCGACCTGCTGGTCATCGGCGGCCATGTG
GGCCGCACCCTGTCCTTCTCTGGCAAGGCCGGCGCCGGCACCCGCCACATCCTGGCCCACGCCTCCATCCCCGTACTGTT
CAGCTGCTGA

Upstream 100 bases:

>100_bases
AACCAATACCGATTTGCGCAATTTCGCTTGACGTGCGCCTCCGCCGGGGGTGAACTATCCTGACCGGAAAAGACAACGAT
ACCGGACACAGGGTGGGGTC

Downstream 100 bases:

>100_bases
GCGGCTGAAGGAAGGGAAAGGGCGAAGGGACTCGTCCCTTCGCGCATCCCTGTTCCTTGATGCCGCCGGATCGGGCGGAT
CAGGACGACGCCCCGCCGCG

Product: universal stress protein UspA-like nucleotide-binding protein

Products: NA

Alternate protein names: UspA Domain Protein; Universal Stress Protein; Universal Stress Protein UspA; Universal Stress Protein Family Protein; Universal Stress Protein Family; UspA Stress Protein; Universal Stress Family Protein; Universal Stress Protein UspA Family; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MNIKDILVHLDGDKVDSGTLALAVAQAQRFGARLTGLFARKEISPTAMVARHPSNTLLAQADAARQAFEAATAGLETRWW
QIVHGAETDLLGEAVFCSHYVDLVIVSQPAAYGKNVPETMVEQIILNSGRPVLVVPVEYTHRPLGKKVVIGWRSGKQAAR
ALHDCLPLVEGADEVLVASVRGFAPMDSTTPRVDVIDHLRVHGLPVHGERVNTEGLGIMDSLLSRAYDIDADLLVIGGHV
GRTLSFSGKAGAGTRHILAHASIPVLFSC

Sequences:

>Translated_269_residues
MNIKDILVHLDGDKVDSGTLALAVAQAQRFGARLTGLFARKEISPTAMVARHPSNTLLAQADAARQAFEAATAGLETRWW
QIVHGAETDLLGEAVFCSHYVDLVIVSQPAAYGKNVPETMVEQIILNSGRPVLVVPVEYTHRPLGKKVVIGWRSGKQAAR
ALHDCLPLVEGADEVLVASVRGFAPMDSTTPRVDVIDHLRVHGLPVHGERVNTEGLGIMDSLLSRAYDIDADLLVIGGHV
GRTLSFSGKAGAGTRHILAHASIPVLFSC
>Mature_269_residues
MNIKDILVHLDGDKVDSGTLALAVAQAQRFGARLTGLFARKEISPTAMVARHPSNTLLAQADAARQAFEAATAGLETRWW
QIVHGAETDLLGEAVFCSHYVDLVIVSQPAAYGKNVPETMVEQIILNSGRPVLVVPVEYTHRPLGKKVVIGWRSGKQAAR
ALHDCLPLVEGADEVLVASVRGFAPMDSTTPRVDVIDHLRVHGLPVHGERVNTEGLGIMDSLLSRAYDIDADLLVIGGHV
GRTLSFSGKAGAGTRHILAHASIPVLFSC

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28809; Mature: 28809

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS00801 TRANSKETOLASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKDILVHLDGDKVDSGTLALAVAQAQRFGARLTGLFARKEISPTAMVARHPSNTLLAQ
CCHHHEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCEEEH
ADAARQAFEAATAGLETRWWQIVHGAETDLLGEAVFCSHYVDLVIVSQPAAYGKNVPETM
HHHHHHHHHHHHCCCCHHHEEEEECCCHHHHHHHHHHHHCEEEEEEECCHHHCCCCHHHH
VEQIILNSGRPVLVVPVEYTHRPLGKKVVIGWRSGKQAARALHDCLPLVEGADEVLVASV
HHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHH
RGFAPMDSTTPRVDVIDHLRVHGLPVHGERVNTEGLGIMDSLLSRAYDIDADLLVIGGHV
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCEEEECCCC
GRTLSFSGKAGAGTRHILAHASIPVLFSC
CCEEEECCCCCCCCCEEEEECCCCEEEEC
>Mature Secondary Structure
MNIKDILVHLDGDKVDSGTLALAVAQAQRFGARLTGLFARKEISPTAMVARHPSNTLLAQ
CCHHHEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCEEEH
ADAARQAFEAATAGLETRWWQIVHGAETDLLGEAVFCSHYVDLVIVSQPAAYGKNVPETM
HHHHHHHHHHHHCCCCHHHEEEEECCCHHHHHHHHHHHHCEEEEEEECCHHHCCCCHHHH
VEQIILNSGRPVLVVPVEYTHRPLGKKVVIGWRSGKQAARALHDCLPLVEGADEVLVASV
HHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHH
RGFAPMDSTTPRVDVIDHLRVHGLPVHGERVNTEGLGIMDSLLSRAYDIDADLLVIGGHV
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCEEEECCCC
GRTLSFSGKAGAGTRHILAHASIPVLFSC
CCEEEECCCCCCCCCEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA