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The map label for this gene is badM [H]

Identifier: 83312490

GI number: 83312490

Start: 3686478

End: 3686888

Strand: Reverse

Name: badM [H]

Synonym: amb3391

Alternate gene names: 83312490

Gene position: 3686888-3686478 (Counterclockwise)

Preceding gene: 83312491

Following gene: 83312486

Centisome position: 74.23

GC content: 66.91

Gene sequence:

>411_bases
ATGAAGCTCCAGAAAGCCACGCGCTGCGCCCTGTTCGCCATCCTGGAACTGGCCTCGGGCCAGGACCGCCAGCTCTCGGC
CAACGAGATCGCCGAGAAGTACGGCATCAGCACCAACCATCTGGCCAAGGTGCTGCGCTCCCTGGGCCGCGTCGGCCTGG
TCGAGGCGGTGCGCGGCGCCGGCGGCGGCTACCGCTTTTCCGGCAACCGGCGGCGCACCACTCTGCTGGACATCATCCAG
CTGTTCGAGACCATCGACCCCATCCGCCACGGCGAGCGGGAAGACGGCGACGACACCGCCGAGGGCAAGGGCCTATGCCA
GGTGCTGATGGAGATCGAGGACACGGCACGCGCCACCTTCGCCTCCATCACCCTCGACACCATGATCAAGCTGGTGGAAA
AGCACCGGTAG

Upstream 100 bases:

>100_bases
TGCGGACCATGCTGGCGCGCGACGACACCCTGATCATGAGCTTCTTCCGCAGCCAGGGCATGATGGCCGGTCCCTTCATC
CAGTTCGAGAAGGATCTCTG

Downstream 100 bases:

>100_bases
CGGGGGCGTTTTCCGGAAGGATAAGGATGAAGTGTCATCCCGAGCGGAGGCGAGGGATCTCATCCTGGCACGGCTTTTCA
GAATTGGCGCCGCCGGTCCA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKLQKATRCALFAILELASGQDRQLSANEIAEKYGISTNHLAKVLRSLGRVGLVEAVRGAGGGYRFSGNRRRTTLLDIIQ
LFETIDPIRHGEREDGDDTAEGKGLCQVLMEIEDTARATFASITLDTMIKLVEKHR

Sequences:

>Translated_136_residues
MKLQKATRCALFAILELASGQDRQLSANEIAEKYGISTNHLAKVLRSLGRVGLVEAVRGAGGGYRFSGNRRRTTLLDIIQ
LFETIDPIRHGEREDGDDTAEGKGLCQVLMEIEDTARATFASITLDTMIKLVEKHR
>Mature_136_residues
MKLQKATRCALFAILELASGQDRQLSANEIAEKYGISTNHLAKVLRSLGRVGLVEAVRGAGGGYRFSGNRRRTTLLDIIQ
LFETIDPIRHGEREDGDDTAEGKGLCQVLMEIEDTARATFASITLDTMIKLVEKHR

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15029; Mature: 15029

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQKATRCALFAILELASGQDRQLSANEIAEKYGISTNHLAKVLRSLGRVGLVEAVRGA
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
GGGYRFSGNRRRTTLLDIIQLFETIDPIRHGEREDGDDTAEGKGLCQVLMEIEDTARATF
CCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ASITLDTMIKLVEKHR
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLQKATRCALFAILELASGQDRQLSANEIAEKYGISTNHLAKVLRSLGRVGLVEAVRGA
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
GGGYRFSGNRRRTTLLDIIQLFETIDPIRHGEREDGDDTAEGKGLCQVLMEIEDTARATF
CCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ASITLDTMIKLVEKHR
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9177244 [H]