| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312444
Identifier: 83312444
GI number: 83312444
Start: 3634918
End: 3635526
Strand: Reverse
Name: 83312444
Synonym: amb3345
Alternate gene names: NA
Gene position: 3635526-3634918 (Counterclockwise)
Preceding gene: 83312446
Following gene: 83312442
Centisome position: 73.19
GC content: 73.23
Gene sequence:
>609_bases ATGCACCGAGACGCGCAGCGCCGGGCCGATCACCCTGCCGCCGCCGCCGCCGCCGCTGCCGGGTCCCCCAAAGCCGGGTC GGCCGTCGGGCGGCCCGCCAAAGCCGGGGCGATTTTCGGGTGGCCCGGCGAAGCCGGGGCCGGGGCCATGCATATGCCGC CCGCCACCACGCCCCACGCCGGTGCTGGGGCCGTTGCCCAAGGGGCCGGGACGGGTGGAAACCTTGATCTCGCGCCCGTC CAACCCTTCCTTCAGGGCGGAGTGGACATAGGCGGCCAGACCGAAATCCTCGTTGTCCAGGCTGCGGGCTGCGGGCCCCA GCCCACCCGGAATTGCGACGATTCCTGGCTGCTGAGGGTGTCCTGGCGCTGGTCCGGGGGCAGTTGCTCGGCCAGGGTGA CCAGGCCGGCCACCCGTTCGGCGGCGTTGCGGCCGCCGATGGTCTCCAGCGCTTCCTGGCGCTGGGCGGCGAACAGCACC ACCGCCGCCGCCGCCGAGATCATCAGGGCGGCGACTAGCACCAGGGCGGTCCGCCCCACCACGCTGTCGGGCAGCACCCT CAGTCCCTTGGCGCGCAAGGAGCTCATGACCGTTCCACTTCGGGGGTGA
Upstream 100 bases:
>100_bases GTACCAGGGCGATGACCAGCGGCGCCACGAAGCGCGGCCGCCACAGGGGATCGCCCAGGTCCAGGGGCGCCAGCACGTTC AGCCAGGACCCGTCGTTGAG
Downstream 100 bases:
>100_bases AGAGATAGCCGCCGCCCCGCACCGTCTTGATGATCTGCGGGTCGCGGGCGTCGTCGCCGATGCGCTTCCTCAGGCGGCTG ACCTGGATGTCGATGGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MHRDAQRRADHPAAAAAAAAGSPKAGSAVGRPAKAGAIFGWPGEAGAGAMHMPPATTPHAGAGAVAQGAGTGGNLDLAPV QPFLQGGVDIGGQTEILVVQAAGCGPQPTRNCDDSWLLRVSWRWSGGSCSARVTRPATRSAALRPPMVSSASWRWAANST TAAAAEIIRAATSTRAVRPTTLSGSTLSPLARKELMTVPLRG
Sequences:
>Translated_202_residues MHRDAQRRADHPAAAAAAAAGSPKAGSAVGRPAKAGAIFGWPGEAGAGAMHMPPATTPHAGAGAVAQGAGTGGNLDLAPV QPFLQGGVDIGGQTEILVVQAAGCGPQPTRNCDDSWLLRVSWRWSGGSCSARVTRPATRSAALRPPMVSSASWRWAANST TAAAAEIIRAATSTRAVRPTTLSGSTLSPLARKELMTVPLRG >Mature_202_residues MHRDAQRRADHPAAAAAAAAGSPKAGSAVGRPAKAGAIFGWPGEAGAGAMHMPPATTPHAGAGAVAQGAGTGGNLDLAPV QPFLQGGVDIGGQTEILVVQAAGCGPQPTRNCDDSWLLRVSWRWSGGSCSARVTRPATRSAALRPPMVSSASWRWAANST TAAAAEIIRAATSTRAVRPTTLSGSTLSPLARKELMTVPLRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20359; Mature: 20359
Theoretical pI: Translated: 11.87; Mature: 11.87
Prosite motif: PS00788 CHORISMATE_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRDAQRRADHPAAAAAAAAGSPKAGSAVGRPAKAGAIFGWPGEAGAGAMHMPPATTPHA CCCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCC GAGAVAQGAGTGGNLDLAPVQPFLQGGVDIGGQTEILVVQAAGCGPQPTRNCDDSWLLRV CCCCEECCCCCCCCEECCCCCHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEE SWRWSGGSCSARVTRPATRSAALRPPMVSSASWRWAANSTTAAAAEIIRAATSTRAVRPT EEEECCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCE TLSGSTLSPLARKELMTVPLRG ECCCCCCCHHHHHHEEECCCCC >Mature Secondary Structure MHRDAQRRADHPAAAAAAAAGSPKAGSAVGRPAKAGAIFGWPGEAGAGAMHMPPATTPHA CCCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCC GAGAVAQGAGTGGNLDLAPVQPFLQGGVDIGGQTEILVVQAAGCGPQPTRNCDDSWLLRV CCCCEECCCCCCCCEECCCCCHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEE SWRWSGGSCSARVTRPATRSAALRPPMVSSASWRWAANSTTAAAAEIIRAATSTRAVRPT EEEECCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCE TLSGSTLSPLARKELMTVPLRG ECCCCCCCHHHHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA