| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312401
Identifier: 83312401
GI number: 83312401
Start: 3583647
End: 3584885
Strand: Reverse
Name: 83312401
Synonym: amb3302
Alternate gene names: NA
Gene position: 3584885-3583647 (Counterclockwise)
Preceding gene: 83312404
Following gene: 83312400
Centisome position: 72.17
GC content: 60.37
Gene sequence:
>1239_bases GTGTTGCAGGAATCCCTATCCCGCATCCAGGTACAGCTGCAGGCAGAACGCGGCCAACCTGCCCCTCGCTCCCCGAATAC AACAGTCTCCACCGCGACTTCGTCAGCCACCCAGTCCACCCATCCTACAAACACCGCCGCTCCGGCGTCCCCCGAAGCAC AGGAGCAGCCAGCCTGGCCGAAAGGCTACATCCCGGTCCCTGGGACCAGCACCGCCGTCAAGTTTGGAGGAGCTATCCGT GCCGAGGTTTGGGATGACGTTCAATCGACCCAGGGAGGACGAACGGACGACGCCACCGCCATCCCGGCCCGCGGCACTGC GAAAGCAAACCGCAATGGCGCTCTGAACGGATCCATTTCGGGTTCGCGGTTTAATTTCGGGACGTTGAGCCACACCGAAA TCGGTGACATGAAATCGTTCCTTGAATTCGATCTGGGGACAGATGCCTCGCCCACATTCAGGCTTCGTCATGCGTATATC GCCAATGCCGATTGGCTGGCCGGGCAGACCTGGTCAACTTTCATGGACATGGACAGCCTGCCGGACCTGCTATCGGCGGG GGGATCGGTCGGTTACAGCTGGCTGCGCCGTCCCCAGGTTCGATATTCCATTCAGACCGGCGATCGGGACAAATTGGACA TGGCCGCCGAAGTGCCGACGTCCGACTATTCCGCCCCTTCGGCGATCAATACCGCTCCGGATCTTGTGCTCAAATACACG GCCGGGCAATCTTGGGGGCATTATGCGCTAGGCGGCATGGTCCGCTATCTGCGGTCAGACACCGGGACTGGCGACAAGGC CGACCAGATTGTCTGGGGCTTTCTCGGCGGCGTGAGTATCAAGACCTTCGGTGACGACATCCTGACCCTCCAGACAGTGA ATGGAACCGGTGTGGGAGGAGCCCTCAACCAAGGGACCGGCCTTTCCGCGGCCGTGGTCAACAACTCATTCCGGACATTC GACGCCTTCGGTGGCTCCATGGCCTACAAGCATTATTGGAATCCGAAGCTGCGCTCGACCCTAGCGGTCGGCTATGACCA ATTTGCCAACGCCAGCCGGAATATCGGCACCAATGGCTTGGGCATTCGCAGCCTGGCTTCGGTCCATGGCAATATCGTCT ACAGCCCAATCGCCCCCTTGGATGTCGGCATCGAATATGGCTACGAGGCATTCACCGCCAGCCCAACCGGAACCGGAACC GCCTCGCGGGTGCTGGGCGTGGTGAAATACGGATACTGA
Upstream 100 bases:
>100_bases GGTGCGGAAACTCTCCGTACTGATGCTTGCAACCGCAATTGGAATTCATGCAGAACCGGTAAAGGCAGACCGAATTTCTG ATTTGGAAGATCAGGTTCGG
Downstream 100 bases:
>100_bases CGCCCATGCGCTCGCTCTCGACCATCACCTGGCTTGTGGTCTTGCTGCTTTGCACGGCAGCGTGGTCGGCGGGGGCTGCC GAGTTGACCGATAGCGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MLQESLSRIQVQLQAERGQPAPRSPNTTVSTATSSATQSTHPTNTAAPASPEAQEQPAWPKGYIPVPGTSTAVKFGGAIR AEVWDDVQSTQGGRTDDATAIPARGTAKANRNGALNGSISGSRFNFGTLSHTEIGDMKSFLEFDLGTDASPTFRLRHAYI ANADWLAGQTWSTFMDMDSLPDLLSAGGSVGYSWLRRPQVRYSIQTGDRDKLDMAAEVPTSDYSAPSAINTAPDLVLKYT AGQSWGHYALGGMVRYLRSDTGTGDKADQIVWGFLGGVSIKTFGDDILTLQTVNGTGVGGALNQGTGLSAAVVNNSFRTF DAFGGSMAYKHYWNPKLRSTLAVGYDQFANASRNIGTNGLGIRSLASVHGNIVYSPIAPLDVGIEYGYEAFTASPTGTGT ASRVLGVVKYGY
Sequences:
>Translated_412_residues MLQESLSRIQVQLQAERGQPAPRSPNTTVSTATSSATQSTHPTNTAAPASPEAQEQPAWPKGYIPVPGTSTAVKFGGAIR AEVWDDVQSTQGGRTDDATAIPARGTAKANRNGALNGSISGSRFNFGTLSHTEIGDMKSFLEFDLGTDASPTFRLRHAYI ANADWLAGQTWSTFMDMDSLPDLLSAGGSVGYSWLRRPQVRYSIQTGDRDKLDMAAEVPTSDYSAPSAINTAPDLVLKYT AGQSWGHYALGGMVRYLRSDTGTGDKADQIVWGFLGGVSIKTFGDDILTLQTVNGTGVGGALNQGTGLSAAVVNNSFRTF DAFGGSMAYKHYWNPKLRSTLAVGYDQFANASRNIGTNGLGIRSLASVHGNIVYSPIAPLDVGIEYGYEAFTASPTGTGT ASRVLGVVKYGY >Mature_412_residues MLQESLSRIQVQLQAERGQPAPRSPNTTVSTATSSATQSTHPTNTAAPASPEAQEQPAWPKGYIPVPGTSTAVKFGGAIR AEVWDDVQSTQGGRTDDATAIPARGTAKANRNGALNGSISGSRFNFGTLSHTEIGDMKSFLEFDLGTDASPTFRLRHAYI ANADWLAGQTWSTFMDMDSLPDLLSAGGSVGYSWLRRPQVRYSIQTGDRDKLDMAAEVPTSDYSAPSAINTAPDLVLKYT AGQSWGHYALGGMVRYLRSDTGTGDKADQIVWGFLGGVSIKTFGDDILTLQTVNGTGVGGALNQGTGLSAAVVNNSFRTF DAFGGSMAYKHYWNPKLRSTLAVGYDQFANASRNIGTNGLGIRSLASVHGNIVYSPIAPLDVGIEYGYEAFTASPTGTGT ASRVLGVVKYGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43622; Mature: 43622
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQESLSRIQVQLQAERGQPAPRSPNTTVSTATSSATQSTHPTNTAAPASPEAQEQPAWP CCHHHHHHEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC KGYIPVPGTSTAVKFGGAIRAEVWDDVQSTQGGRTDDATAIPARGTAKANRNGALNGSIS CCCEECCCCCCEEEECCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSRFNFGTLSHTEIGDMKSFLEFDLGTDASPTFRLRHAYIANADWLAGQTWSTFMDMDSL CCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHCHHHH PDLLSAGGSVGYSWLRRPQVRYSIQTGDRDKLDMAAEVPTSDYSAPSAINTAPDLVLKYT HHHHHCCCCCCHHHHCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEE AGQSWGHYALGGMVRYLRSDTGTGDKADQIVWGFLGGVSIKTFGDDILTLQTVNGTGVGG CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEECCCCEEEEEEECCCCCCC ALNQGTGLSAAVVNNSFRTFDAFGGSMAYKHYWNPKLRSTLAVGYDQFANASRNIGTNGL CCCCCCCCEEEEECCCCHHHHHCCCCEEEEECCCHHHHHHHHHCHHHHCCCCCCCCCCCC GIRSLASVHGNIVYSPIAPLDVGIEYGYEAFTASPTGTGTASRVLGVVKYGY CHHHHHHHCCCEEECCCCCCCCCHHCCCEEEECCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MLQESLSRIQVQLQAERGQPAPRSPNTTVSTATSSATQSTHPTNTAAPASPEAQEQPAWP CCHHHHHHEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC KGYIPVPGTSTAVKFGGAIRAEVWDDVQSTQGGRTDDATAIPARGTAKANRNGALNGSIS CCCEECCCCCCEEEECCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSRFNFGTLSHTEIGDMKSFLEFDLGTDASPTFRLRHAYIANADWLAGQTWSTFMDMDSL CCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHCHHHH PDLLSAGGSVGYSWLRRPQVRYSIQTGDRDKLDMAAEVPTSDYSAPSAINTAPDLVLKYT HHHHHCCCCCCHHHHCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEE AGQSWGHYALGGMVRYLRSDTGTGDKADQIVWGFLGGVSIKTFGDDILTLQTVNGTGVGG CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEECCCCEEEEEEECCCCCCC ALNQGTGLSAAVVNNSFRTFDAFGGSMAYKHYWNPKLRSTLAVGYDQFANASRNIGTNGL CCCCCCCCEEEEECCCCHHHHHCCCCEEEEECCCHHHHHHHHHCHHHHCCCCCCCCCCCC GIRSLASVHGNIVYSPIAPLDVGIEYGYEAFTASPTGTGTASRVLGVVKYGY CHHHHHHHCCCEEECCCCCCCCCHHCCCEEEECCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA