| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312387
Identifier: 83312387
GI number: 83312387
Start: 3565206
End: 3566300
Strand: Reverse
Name: 83312387
Synonym: amb3288
Alternate gene names: NA
Gene position: 3566300-3565206 (Counterclockwise)
Preceding gene: 83312388
Following gene: 83312386
Centisome position: 71.8
GC content: 71.6
Gene sequence:
>1095_bases ATGTCGTCTTCCATCACCGAAATCCTGTATGTCAGCCGTGATGTGGCCTGGCTGCCCTGGGCGGTCCAGTACTTCTTCCT GATCGGTCTGTCGGTGTGCCTGTTCCTGTTGTCGCTGCCCGGCCTGCTGCTGGGGCGAAGCGACTGGGGCGCCGTCGGCC GCCTTGCCCTGCTGGGCGCCCTGGTGTGCGGCGCCAGCGCGCCGGTGGCCCTGCTGGCCGACCTGCACCAGCCCGGCCGC TTCCTGAACTTCTATCTCCATCCGCAATGGGGCTCGTGGATGGCCTGGGGGGCCTTCTTCATCCCCCTCTATCTGGCGGG GCTGTTCGCCTATGCCTATGCCGCCCTGCGTCCGGCCTTCGCGGCGGAGGCGGGCCGGGGCGGCGCCTTGGCGCCCCTCC GTCGCCTGCTGGGCGGCGGCGCCCTGCCCGGCCTGCTGCGGGCCGGGGCCGCCCTGGCGGTTCTCGGCGGCGCCCTGGTG ATGCTGTACACCGGCGCCGAGGTGATGGTGGTCAAGGCGCGCCCCCTGTGGAACACGCCGGTTCTGCCGCTGCAGTTCCT GGCCACCGCCATGGTGGGAGCCCTGGGCCTGCTGCTGGTTCTCAACCGCACCCTGGGCGAGGGCGACATGGGCGTGGAGG CGCGGCTGAACGCGCTGTTGGCCAAGGCGCTGCTGGCCGTTCTGGCCCTGGGCGGAGTCTGGCTGGCCCTGGGGCTGACC GGCCTGTCGCCCCGCCATGCCCGCGCCCTGGCCGAGGTCTCCGGCTCGGCCTCGTGGGGGCTGACCGCCCTGTGGGCGGT GGCCGCCACCCTGGTGCCCCTGGGACTTGCCCTCGGGCGCCCGGCGGGCAGCGGCTGGATCACCGGCCTGATTGCCCTGC ATTCCGCCTGGATGTTCCGCTGGACGGTGTTCATCGGCGGCCAGGAGGTGCCCAAGACCGGCGCCGGCTTCTACCAATAC CACCTGCCGCTGGGACCCGAGGGCCTGATGGGCATCATCGGCACCGCCGGCCTGTGGCTGGTCATCCTGCTGGCCCTGAC CACCCTGTTGCCGTGGTCGGACAGCCGCAATCATGCCAACGGCTGGAAAGGCTGA
Upstream 100 bases:
>100_bases CAACGTCTATTACATCGGCCTGGACGAGCGCTTCGCCGGCCGGGTCGACGGAACGCCCACCCTGTGGCGGCCGTCGAGCC ACGTTTAGGAGGGCCCCGTC
Downstream 100 bases:
>100_bases CACCTTTCCAGCGCCCTCAATCGCCGGGCGCGCCCTCCGGGCCGCTTGGCTTCCGCGCCATAAGGCGCGCGGCCACCTTG TGACCGTCCAGCGGTCGAAT
Product: tetrathionate reductase subunit C
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSSSITEILYVSRDVAWLPWAVQYFFLIGLSVCLFLLSLPGLLLGRSDWGAVGRLALLGALVCGASAPVALLADLHQPGR FLNFYLHPQWGSWMAWGAFFIPLYLAGLFAYAYAALRPAFAAEAGRGGALAPLRRLLGGGALPGLLRAGAALAVLGGALV MLYTGAEVMVVKARPLWNTPVLPLQFLATAMVGALGLLLVLNRTLGEGDMGVEARLNALLAKALLAVLALGGVWLALGLT GLSPRHARALAEVSGSASWGLTALWAVAATLVPLGLALGRPAGSGWITGLIALHSAWMFRWTVFIGGQEVPKTGAGFYQY HLPLGPEGLMGIIGTAGLWLVILLALTTLLPWSDSRNHANGWKG
Sequences:
>Translated_364_residues MSSSITEILYVSRDVAWLPWAVQYFFLIGLSVCLFLLSLPGLLLGRSDWGAVGRLALLGALVCGASAPVALLADLHQPGR FLNFYLHPQWGSWMAWGAFFIPLYLAGLFAYAYAALRPAFAAEAGRGGALAPLRRLLGGGALPGLLRAGAALAVLGGALV MLYTGAEVMVVKARPLWNTPVLPLQFLATAMVGALGLLLVLNRTLGEGDMGVEARLNALLAKALLAVLALGGVWLALGLT GLSPRHARALAEVSGSASWGLTALWAVAATLVPLGLALGRPAGSGWITGLIALHSAWMFRWTVFIGGQEVPKTGAGFYQY HLPLGPEGLMGIIGTAGLWLVILLALTTLLPWSDSRNHANGWKG >Mature_363_residues SSSITEILYVSRDVAWLPWAVQYFFLIGLSVCLFLLSLPGLLLGRSDWGAVGRLALLGALVCGASAPVALLADLHQPGRF LNFYLHPQWGSWMAWGAFFIPLYLAGLFAYAYAALRPAFAAEAGRGGALAPLRRLLGGGALPGLLRAGAALAVLGGALVM LYTGAEVMVVKARPLWNTPVLPLQFLATAMVGALGLLLVLNRTLGEGDMGVEARLNALLAKALLAVLALGGVWLALGLTG LSPRHARALAEVSGSASWGLTALWAVAATLVPLGLALGRPAGSGWITGLIALHSAWMFRWTVFIGGQEVPKTGAGFYQYH LPLGPEGLMGIIGTAGLWLVILLALTTLLPWSDSRNHANGWKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38203; Mature: 38072
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSITEILYVSRDVAWLPWAVQYFFLIGLSVCLFLLSLPGLLLGRSDWGAVGRLALLGA CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHH LVCGASAPVALLADLHQPGRFLNFYLHPQWGSWMAWGAFFIPLYLAGLFAYAYAALRPAF HHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAEAGRGGALAPLRRLLGGGALPGLLRAGAALAVLGGALVMLYTGAEVMVVKARPLWNTP HHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCCCC VLPLQFLATAMVGALGLLLVLNRTLGEGDMGVEARLNALLAKALLAVLALGGVWLALGLT CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLSPRHARALAEVSGSASWGLTALWAVAATLVPLGLALGRPAGSGWITGLIALHSAWMFR CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH WTVFIGGQEVPKTGAGFYQYHLPLGPEGLMGIIGTAGLWLVILLALTTLLPWSDSRNHAN EEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GWKG CCCC >Mature Secondary Structure SSSITEILYVSRDVAWLPWAVQYFFLIGLSVCLFLLSLPGLLLGRSDWGAVGRLALLGA CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHH LVCGASAPVALLADLHQPGRFLNFYLHPQWGSWMAWGAFFIPLYLAGLFAYAYAALRPAF HHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAEAGRGGALAPLRRLLGGGALPGLLRAGAALAVLGGALVMLYTGAEVMVVKARPLWNTP HHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCCCC VLPLQFLATAMVGALGLLLVLNRTLGEGDMGVEARLNALLAKALLAVLALGGVWLALGLT CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLSPRHARALAEVSGSASWGLTALWAVAATLVPLGLALGRPAGSGWITGLIALHSAWMFR CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH WTVFIGGQEVPKTGAGFYQYHLPLGPEGLMGIIGTAGLWLVILLALTTLLPWSDSRNHAN EEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GWKG CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA