Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83312378

Identifier: 83312378

GI number: 83312378

Start: 3556004

End: 3557707

Strand: Reverse

Name: 83312378

Synonym: amb3279

Alternate gene names: NA

Gene position: 3557707-3556004 (Counterclockwise)

Preceding gene: 83312383

Following gene: 83312376

Centisome position: 71.62

GC content: 53.52

Gene sequence:

>1704_bases
ATGAACGCAGCCAAACCATTGACCCGCAAAGGCAACCACTCCAAGGGCCGTAAGGCAGGGGTTTCAGATCTGGCAACGGA
ATCGCTCAACGAGTTCCGGTTTATAGATATCCCAGTAATTCTGCGCCGGAAACAAGGTCGATCCATTTGGACCGCCCGCG
TCACCATGGCTCCCGCTCCAGGGATGTTCGCCATCAACAATGATGGCAATCGGCTGGAACGCACCACCGGCGAAAGCGAC
CTTGAAAGGGCTAAAGACAAGGCCCGGCAGCTTTACGCGGCCCTGAATTATCGGGCGGAACGAGGCGAGAGCCTTCACCC
CAAGAGCTTCAACGGGTTGGTGTCGGAATATCTGCGATGGCTCGATGAGCGGGTCAATCTTGGCTTCGTCAAACCATACG
TCCGTGCCCGCGTCAGCACCACCTTGGAACGGTATTTCGTTCCATTCTTCGACGACAAGTTGATCGACACCATCACCGCC
GCTGATCTCGTGCGATATCATGAATGGCGCGAGAGCTATGCCATCGCCTACAAAGGTAAGACGTTCATTAAATATGAACG
TAATGGCAAGGAACTGGTTCGCCCCTTCACCCCGGTCACCCCAAGCCCCGCCACGATCAGGAAGGAGCGCCAACAGTTCT
ACCAGTTCATGGAGTTCTCGGCGTCCAGGGGATATTTGCGTGCGGAGGCCATTCCTCGTTTTAAGCGACTTTCCGGCACT
GGCAGTGTCCGCTTGGCCTTTTCTCCCGACGAAATCGAGCGCCTGCAAAAGGTATCAGCATCGCGATGTCGTAAACACCT
TCACGCCATCCAGCGCCGTGCCATGGTAATTAACCACTACCGCATGATGGTGTTATACTTATCAGGCTTGCGCACCGTTG
AGGCGTCGCGCCTTAGATTTCGCGATCTCATTTCTGGGGTAGATAAGGCGGGGGAAATCTCATACCTCGTCCGGCTGCGG
CCCGAGCATTTGAAAAAGGCTGATGTCAGAAAACACCTGCGGACGGTGACGCCACAGTCAGGATTCAAGTCAATCGTGGA
CAACCTCAAGAAGGCTTACGCCCACTTTGATAAATATGAGGTGACCGAGGACGATTTTGTGTTCCATGACAAAGATGGAA
CAATGAATCGCAACACAGCGAAGCCATTTATTGAACTGCTGGATGCCGCCAAGTTTTCCAGGGGGGTGCGTTACAAAAGC
CATTATGCATTGGGATCGTTTCGACACACCTTTATCACGGACAGGCTGTATGAACGCCAAGATTTGGGCTTTGTCTCGCG
TTGGACAGGAACATCCATCGAGATGATCGATCGGCATTACAGCCACGTGCTGAACGAGATGGAACATCAGGAGCCTCGAC
CGCCGAACACCGTTGTCGTGCTACCCCATAGCTTGGAGTATCTGCTCGGGAAGGCCGATGTCGACCCCACTGAAGAAGGG
CCGACCATTTTCAATACAGCGAAGGCGATTGAGCCTGCATTTGACCTGGATCGACGCAGGAAAGAATGGGGCGGCGACGT
GAGGGAGTTCTTGCGGATCATGCGGGATGTCTATGGCGATAGGTTCGTCAATCTCCCAATCGATCAAAAGCTGGGCGAAA
TCCACAACTTTGTGGGGGAGCACGGCTTTAATTCTGTGGAAGCAAACGATTTTTTGGTTCTGGTGATCGAAGTTCTTGAG
GTCGAGTCCAGCGCCGTTCTTTAG

Upstream 100 bases:

>100_bases
AGGAAAACTGCGACTTTCATCGTTCCTGGAATTGACAGACCTATGCCATACTTTCTACCATAGCTTGGTGGCAGGTTTTG
GGGACGATCCGGGGACGCTT

Downstream 100 bases:

>100_bases
GGTCGTCGGTTCAAGGGCCGGGCATCAGCATTTTTGCGGTCATGAACAGCCACAGAGATGACAACCTTGAATAGCATTGG
TGCCAAACCCTGTCCCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MNAAKPLTRKGNHSKGRKAGVSDLATESLNEFRFIDIPVILRRKQGRSIWTARVTMAPAPGMFAINNDGNRLERTTGESD
LERAKDKARQLYAALNYRAERGESLHPKSFNGLVSEYLRWLDERVNLGFVKPYVRARVSTTLERYFVPFFDDKLIDTITA
ADLVRYHEWRESYAIAYKGKTFIKYERNGKELVRPFTPVTPSPATIRKERQQFYQFMEFSASRGYLRAEAIPRFKRLSGT
GSVRLAFSPDEIERLQKVSASRCRKHLHAIQRRAMVINHYRMMVLYLSGLRTVEASRLRFRDLISGVDKAGEISYLVRLR
PEHLKKADVRKHLRTVTPQSGFKSIVDNLKKAYAHFDKYEVTEDDFVFHDKDGTMNRNTAKPFIELLDAAKFSRGVRYKS
HYALGSFRHTFITDRLYERQDLGFVSRWTGTSIEMIDRHYSHVLNEMEHQEPRPPNTVVVLPHSLEYLLGKADVDPTEEG
PTIFNTAKAIEPAFDLDRRRKEWGGDVREFLRIMRDVYGDRFVNLPIDQKLGEIHNFVGEHGFNSVEANDFLVLVIEVLE
VESSAVL

Sequences:

>Translated_567_residues
MNAAKPLTRKGNHSKGRKAGVSDLATESLNEFRFIDIPVILRRKQGRSIWTARVTMAPAPGMFAINNDGNRLERTTGESD
LERAKDKARQLYAALNYRAERGESLHPKSFNGLVSEYLRWLDERVNLGFVKPYVRARVSTTLERYFVPFFDDKLIDTITA
ADLVRYHEWRESYAIAYKGKTFIKYERNGKELVRPFTPVTPSPATIRKERQQFYQFMEFSASRGYLRAEAIPRFKRLSGT
GSVRLAFSPDEIERLQKVSASRCRKHLHAIQRRAMVINHYRMMVLYLSGLRTVEASRLRFRDLISGVDKAGEISYLVRLR
PEHLKKADVRKHLRTVTPQSGFKSIVDNLKKAYAHFDKYEVTEDDFVFHDKDGTMNRNTAKPFIELLDAAKFSRGVRYKS
HYALGSFRHTFITDRLYERQDLGFVSRWTGTSIEMIDRHYSHVLNEMEHQEPRPPNTVVVLPHSLEYLLGKADVDPTEEG
PTIFNTAKAIEPAFDLDRRRKEWGGDVREFLRIMRDVYGDRFVNLPIDQKLGEIHNFVGEHGFNSVEANDFLVLVIEVLE
VESSAVL
>Mature_567_residues
MNAAKPLTRKGNHSKGRKAGVSDLATESLNEFRFIDIPVILRRKQGRSIWTARVTMAPAPGMFAINNDGNRLERTTGESD
LERAKDKARQLYAALNYRAERGESLHPKSFNGLVSEYLRWLDERVNLGFVKPYVRARVSTTLERYFVPFFDDKLIDTITA
ADLVRYHEWRESYAIAYKGKTFIKYERNGKELVRPFTPVTPSPATIRKERQQFYQFMEFSASRGYLRAEAIPRFKRLSGT
GSVRLAFSPDEIERLQKVSASRCRKHLHAIQRRAMVINHYRMMVLYLSGLRTVEASRLRFRDLISGVDKAGEISYLVRLR
PEHLKKADVRKHLRTVTPQSGFKSIVDNLKKAYAHFDKYEVTEDDFVFHDKDGTMNRNTAKPFIELLDAAKFSRGVRYKS
HYALGSFRHTFITDRLYERQDLGFVSRWTGTSIEMIDRHYSHVLNEMEHQEPRPPNTVVVLPHSLEYLLGKADVDPTEEG
PTIFNTAKAIEPAFDLDRRRKEWGGDVREFLRIMRDVYGDRFVNLPIDQKLGEIHNFVGEHGFNSVEANDFLVLVIEVLE
VESSAVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65605; Mature: 65605

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAKPLTRKGNHSKGRKAGVSDLATESLNEFRFIDIPVILRRKQGRSIWTARVTMAPAP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECHHEEECCCCCEEEEEEEEECCCC
GMFAINNDGNRLERTTGESDLERAKDKARQLYAALNYRAERGESLHPKSFNGLVSEYLRW
CEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LDERVNLGFVKPYVRARVSTTLERYFVPFFDDKLIDTITAADLVRYHEWRESYAIAYKGK
HHHHCCCCHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHHEEEEECCC
TFIKYERNGKELVRPFTPVTPSPATIRKERQQFYQFMEFSASRGYLRAEAIPRFKRLSGT
EEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHCHHHHHCCCC
GSVRLAFSPDEIERLQKVSASRCRKHLHAIQRRAMVINHYRMMVLYLSGLRTVEASRLRF
CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDLISGVDKAGEISYLVRLRPEHLKKADVRKHLRTVTPQSGFKSIVDNLKKAYAHFDKYE
HHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
VTEDDFVFHDKDGTMNRNTAKPFIELLDAAKFSRGVRYKSHYALGSFRHTFITDRLYERQ
CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
DLGFVSRWTGTSIEMIDRHYSHVLNEMEHQEPRPPNTVVVLPHSLEYLLGKADVDPTEEG
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHCCCCCCCCCCC
PTIFNTAKAIEPAFDLDRRRKEWGGDVREFLRIMRDVYGDRFVNLPIDQKLGEIHNFVGE
CCEEHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHH
HGFNSVEANDFLVLVIEVLEVESSAVL
CCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNAAKPLTRKGNHSKGRKAGVSDLATESLNEFRFIDIPVILRRKQGRSIWTARVTMAPAP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECHHEEECCCCCEEEEEEEEECCCC
GMFAINNDGNRLERTTGESDLERAKDKARQLYAALNYRAERGESLHPKSFNGLVSEYLRW
CEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LDERVNLGFVKPYVRARVSTTLERYFVPFFDDKLIDTITAADLVRYHEWRESYAIAYKGK
HHHHCCCCHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHHEEEEECCC
TFIKYERNGKELVRPFTPVTPSPATIRKERQQFYQFMEFSASRGYLRAEAIPRFKRLSGT
EEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHCHHHHHCCCC
GSVRLAFSPDEIERLQKVSASRCRKHLHAIQRRAMVINHYRMMVLYLSGLRTVEASRLRF
CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDLISGVDKAGEISYLVRLRPEHLKKADVRKHLRTVTPQSGFKSIVDNLKKAYAHFDKYE
HHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
VTEDDFVFHDKDGTMNRNTAKPFIELLDAAKFSRGVRYKSHYALGSFRHTFITDRLYERQ
CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
DLGFVSRWTGTSIEMIDRHYSHVLNEMEHQEPRPPNTVVVLPHSLEYLLGKADVDPTEEG
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHCCCCCCCCCCC
PTIFNTAKAIEPAFDLDRRRKEWGGDVREFLRIMRDVYGDRFVNLPIDQKLGEIHNFVGE
CCEEHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHH
HGFNSVEANDFLVLVIEVLEVESSAVL
CCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA