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The map label for this gene is etfB [H]

Identifier: 83312329

GI number: 83312329

Start: 3490928

End: 3491677

Strand: Reverse

Name: etfB [H]

Synonym: amb3230

Alternate gene names: 83312329

Gene position: 3491677-3490928 (Counterclockwise)

Preceding gene: 83312330

Following gene: 83312328

Centisome position: 70.3

GC content: 66.4

Gene sequence:

>750_bases
ATGAAGGTGTTGGTCGCGATCAAGCGTGTGATCGATTACAACGTGAAGATTCGGGTGAAGTCGGACGGTTCGGGCGTCGA
GACCCAGAACGTGAAGTTCTCCATGAACCCGTTCGACGAGATCGCGGTTGAGGAGGCGGTTCGCCTCAAGGAAGCGGGCA
AGGCCACGGAAGTGGTGGTGGTCTCCATCGGCCCGGCCGCCGCGTCGGAGACGCTGCGCACGGCGCTGGCCATGGGCGCC
GACCGTGGCGTGCTGGTCCAGACCGATGACGAGGTCCAGCCCCTGGGCGTGGCCAAGGTCTTGAAGGCGCTGGTGGCCAA
GGAGGCTCCCGGGCTGATCATCCTGGGCAAGCAGGCCATCGACGACGATTCCAACCAGACCGGCCAGATGCTGGCGGCGC
TGCTGGGCTGTGCCCAGGGCACCTTCGCCAGCAAGGTGGAGATCGGCGCCGATGCCATCACCGTCACCCGCGAGGTGGAC
GGCGGGCTGGAGACGGTGTCGCTGAAGCTGCCGGCGGTGGTGACCACCGACCTGCGCCTCAACGAGCCGCGCTATGCCTC
GCTGCCCAACATCATGAAGGCCAAGAAGAAGCCCATCGACACGGTGTCGCCGGCCGATCTGGGCGTCGACGTGGCGCCGC
GCCTAGTGACGCTGTCGGTGGCCGAGCCGCCCAAGCGCAGCGCCGGCATCAAGGTGGCCGACGTGGCCGCCCTGGTCGAC
AAGCTGAAGAACGAAGCCAAGGTGATCTGA

Upstream 100 bases:

>100_bases
GGTCGGGCCATGACCGGCATCCAGGCGTTCTCCTGAACCTGAAGCCACGATACCGGCCGGGCAGCGATGCCCGGCCGAAC
TTCAAGAGGGTGATGCAGTC

Downstream 100 bases:

>100_bases
CGGCACGACCGGGCGATTGCCCGGACCCATTTGGGGCGATGCCCCAAACCCCCCTTGAATTCAAAAGGGGTCCGGGGTCT
TCCCCGGTCGGGGTGCGGGG

Product: electron transfer flavoprotein

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKVLVAIKRVIDYNVKIRVKSDGSGVETQNVKFSMNPFDEIAVEEAVRLKEAGKATEVVVVSIGPAAASETLRTALAMGA
DRGVLVQTDDEVQPLGVAKVLKALVAKEAPGLIILGKQAIDDDSNQTGQMLAALLGCAQGTFASKVEIGADAITVTREVD
GGLETVSLKLPAVVTTDLRLNEPRYASLPNIMKAKKKPIDTVSPADLGVDVAPRLVTLSVAEPPKRSAGIKVADVAALVD
KLKNEAKVI

Sequences:

>Translated_249_residues
MKVLVAIKRVIDYNVKIRVKSDGSGVETQNVKFSMNPFDEIAVEEAVRLKEAGKATEVVVVSIGPAAASETLRTALAMGA
DRGVLVQTDDEVQPLGVAKVLKALVAKEAPGLIILGKQAIDDDSNQTGQMLAALLGCAQGTFASKVEIGADAITVTREVD
GGLETVSLKLPAVVTTDLRLNEPRYASLPNIMKAKKKPIDTVSPADLGVDVAPRLVTLSVAEPPKRSAGIKVADVAALVD
KLKNEAKVI
>Mature_249_residues
MKVLVAIKRVIDYNVKIRVKSDGSGVETQNVKFSMNPFDEIAVEEAVRLKEAGKATEVVVVSIGPAAASETLRTALAMGA
DRGVLVQTDDEVQPLGVAKVLKALVAKEAPGLIILGKQAIDDDSNQTGQMLAALLGCAQGTFASKVEIGADAITVTREVD
GGLETVSLKLPAVVTTDLRLNEPRYASLPNIMKAKKKPIDTVSPADLGVDVAPRLVTLSVAEPPKRSAGIKVADVAALVD
KLKNEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=252, Percent_Identity=61.1111111111111, Blast_Score=295, Evalue=3e-80,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=59.915611814346, Blast_Score=269, Evalue=1e-72,
Organism=Escherichia coli, GI87081682, Length=231, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=57.3122529644269, Blast_Score=266, Evalue=5e-72,
Organism=Saccharomyces cerevisiae, GI6321646, Length=250, Percent_Identity=48, Blast_Score=226, Evalue=3e-60,
Organism=Drosophila melanogaster, GI24651147, Length=247, Percent_Identity=61.1336032388664, Blast_Score=276, Evalue=1e-74,
Organism=Drosophila melanogaster, GI24651145, Length=247, Percent_Identity=61.1336032388664, Blast_Score=276, Evalue=1e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26128; Mature: 26128

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVAIKRVIDYNVKIRVKSDGSGVETQNVKFSMNPFDEIAVEEAVRLKEAGKATEVVV
CHHHHEEHHHHCCCEEEEEECCCCCCEECCEEEECCCHHHHHHHHHHHHHHCCCCEEEEE
VSIGPAAASETLRTALAMGADRGVLVQTDDEVQPLGVAKVLKALVAKEAPGLIILGKQAI
EEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHC
DDDSNQTGQMLAALLGCAQGTFASKVEIGADAITVTREVDGGLETVSLKLPAVVTTDLRL
CCCCCHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEECCCCEEEEEEEECEEEEECEEE
NEPRYASLPNIMKAKKKPIDTVSPADLGVDVAPRLVTLSVAEPPKRSAGIKVADVAALVD
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHH
KLKNEAKVI
HHHHHCCCC
>Mature Secondary Structure
MKVLVAIKRVIDYNVKIRVKSDGSGVETQNVKFSMNPFDEIAVEEAVRLKEAGKATEVVV
CHHHHEEHHHHCCCEEEEEECCCCCCEECCEEEECCCHHHHHHHHHHHHHHCCCCEEEEE
VSIGPAAASETLRTALAMGADRGVLVQTDDEVQPLGVAKVLKALVAKEAPGLIILGKQAI
EEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHC
DDDSNQTGQMLAALLGCAQGTFASKVEIGADAITVTREVDGGLETVSLKLPAVVTTDLRL
CCCCCHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEECCCCEEEEEEEECEEEEECEEE
NEPRYASLPNIMKAKKKPIDTVSPADLGVDVAPRLVTLSVAEPPKRSAGIKVADVAALVD
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHH
KLKNEAKVI
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8599534; 12597275 [H]