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The map label for this gene is secY

Identifier: 83312210

GI number: 83312210

Start: 3366260

End: 3367603

Strand: Reverse

Name: secY

Synonym: amb3111

Alternate gene names: 83312210

Gene position: 3367603-3366260 (Counterclockwise)

Preceding gene: 83312211

Following gene: 83312209

Centisome position: 67.8

GC content: 62.28

Gene sequence:

>1344_bases
ATGGCCTCCGCTGCCGAGCAGCTCGCCTCGAATCTGAACTTTGGCGTTCTCGCCAAGGCCACCGAGCTCAAGAAGCGAAT
CTGGTTCACCCTGTTGGCGCTGGTCGTCTATCGCCTGGGCACCTGGATCCCCATGCCCGGCGTCGACCCGCATGTGCTGG
GCGACCTGTTCAAGCAGTCGGGCGGCGGCATGCTCGGCATGTTCGACATGCTGGCCGGCGGTGCGCTGCACCGTATGACC
ATCTTCGCGCTGAACATCATGCCGTACATCTCGGCCTCCATCATCCTCCAGCTGATGACCACGGTCATCCCGTCGCTGGA
AGCGGTGAAGAAAGAGGGCGAGTCCGGCCGCAAGAAGATCAACCAGTACACCCGCTATCTCACCGTGGTCATCGCGGTGA
TGCAGGCCTATGGCATCGCCGTCGGTCTCGAGGGCATGACCAGCTCGCGTGGCAGCGCGGTGATGATGGATAGCCATCTG
CTGTTCCGCTTCTCGACCGTGGTGACCCTGACCGGCGGTACCCTCTTCCTGATGTGGCTGGGTGAGCAGATCACCGCGCG
CGGCATCGGCCAGGGCACCTCGCTGATCATCATGGCCGGCATCGTGGCCGAACTGCCCGCCGCCATCAGCAACACCCTGG
AATTGGGCCGTACTGGCGCCCTGCCGGTGCTGGTGATCATCGGCATCCTGGTGATGAGCGTGGCGGTTGTCGCCTTCATC
GTCTTTATGGAGCGCGCTCAGCGCCGGATCATCGTTCAGTATCCGAAGCGCCAGGTGGGCAACAAGATGTTCGGCGGCGA
ATCGTCGCATCTGCCTCTGAAGGTCAACACCTCCGGCGTGATTCCGCCGATTTTCGCCAGCTCGATCCTGCTGATGCCGG
TGACCATCGCCCAGTTCACCGCCTCGGGCGGGCCGGAGTGGCTGACCACTTTCACCGCCCTGATGGGCCGGGGCCAGCCG
CTGTATCTGGCGCTGTACCTCAGCCTGATCGTGTTCTTTTCGTTCTTCTATACCGCCGTGGTGTTCAATCCGGTGGATAC
GGCCGAGAATCTGAAGAAGTACGGCGGCTTCATTCCGGGTATCCGTCCGGGCAAGAATACCTCCGATTATCTCGACTACG
TCCTGACCCGTCTGACCGTGGTGGGCGCCGCCTATCTGTCGGTGCTGTCCATCCTGCCGGAGCTGCTGATCAGCAAGTTT
TCGGTGCCGTTCTACTTCGGCGGCACCTCGCTGCTGATCGTGGTGTCGGTGACCATGGACACGGTGGCTCAGGTTCAGTC
GCATCTGCTTGCGCACCAGTACGAGGGGCTCATCAAGAAGTCCCGGCTGCGCGGGCGGCGTTAA

Upstream 100 bases:

>100_bases
CGATTGACCCGGGTCAAGGGCTGTATCAAGGATTTGTGGTGCGGTGCCAGCCTCGCGAAGGGGTAAGCCCGCCCCGCGCC
ACCGAACCCCGGAGTAAGGC

Downstream 100 bases:

>100_bases
CTGCCAAGAAAAAGGGGACATCCGATGAATCTCGTTCTGTTGGGTCCGCCCGGTGGCGGCAAGGGAACCCAGGCCAAGCG
TCTTCAGGACAAGTACGGTC

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MASAAEQLASNLNFGVLAKATELKKRIWFTLLALVVYRLGTWIPMPGVDPHVLGDLFKQSGGGMLGMFDMLAGGALHRMT
IFALNIMPYISASIILQLMTTVIPSLEAVKKEGESGRKKINQYTRYLTVVIAVMQAYGIAVGLEGMTSSRGSAVMMDSHL
LFRFSTVVTLTGGTLFLMWLGEQITARGIGQGTSLIIMAGIVAELPAAISNTLELGRTGALPVLVIIGILVMSVAVVAFI
VFMERAQRRIIVQYPKRQVGNKMFGGESSHLPLKVNTSGVIPPIFASSILLMPVTIAQFTASGGPEWLTTFTALMGRGQP
LYLALYLSLIVFFSFFYTAVVFNPVDTAENLKKYGGFIPGIRPGKNTSDYLDYVLTRLTVVGAAYLSVLSILPELLISKF
SVPFYFGGTSLLIVVSVTMDTVAQVQSHLLAHQYEGLIKKSRLRGRR

Sequences:

>Translated_447_residues
MASAAEQLASNLNFGVLAKATELKKRIWFTLLALVVYRLGTWIPMPGVDPHVLGDLFKQSGGGMLGMFDMLAGGALHRMT
IFALNIMPYISASIILQLMTTVIPSLEAVKKEGESGRKKINQYTRYLTVVIAVMQAYGIAVGLEGMTSSRGSAVMMDSHL
LFRFSTVVTLTGGTLFLMWLGEQITARGIGQGTSLIIMAGIVAELPAAISNTLELGRTGALPVLVIIGILVMSVAVVAFI
VFMERAQRRIIVQYPKRQVGNKMFGGESSHLPLKVNTSGVIPPIFASSILLMPVTIAQFTASGGPEWLTTFTALMGRGQP
LYLALYLSLIVFFSFFYTAVVFNPVDTAENLKKYGGFIPGIRPGKNTSDYLDYVLTRLTVVGAAYLSVLSILPELLISKF
SVPFYFGGTSLLIVVSVTMDTVAQVQSHLLAHQYEGLIKKSRLRGRR
>Mature_446_residues
ASAAEQLASNLNFGVLAKATELKKRIWFTLLALVVYRLGTWIPMPGVDPHVLGDLFKQSGGGMLGMFDMLAGGALHRMTI
FALNIMPYISASIILQLMTTVIPSLEAVKKEGESGRKKINQYTRYLTVVIAVMQAYGIAVGLEGMTSSRGSAVMMDSHLL
FRFSTVVTLTGGTLFLMWLGEQITARGIGQGTSLIIMAGIVAELPAAISNTLELGRTGALPVLVIIGILVMSVAVVAFIV
FMERAQRRIIVQYPKRQVGNKMFGGESSHLPLKVNTSGVIPPIFASSILLMPVTIAQFTASGGPEWLTTFTALMGRGQPL
YLALYLSLIVFFSFFYTAVVFNPVDTAENLKKYGGFIPGIRPGKNTSDYLDYVLTRLTVVGAAYLSVLSILPELLISKFS
VPFYFGGTSLLIVVSVTMDTVAQVQSHLLAHQYEGLIKKSRLRGRR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=425, Percent_Identity=56, Blast_Score=441, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48519; Mature: 48388

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS00755 SECY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAAEQLASNLNFGVLAKATELKKRIWFTLLALVVYRLGTWIPMPGVDPHVLGDLFKQS
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
GGGMLGMFDMLAGGALHRMTIFALNIMPYISASIILQLMTTVIPSLEAVKKEGESGRKKI
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NQYTRYLTVVIAVMQAYGIAVGLEGMTSSRGSAVMMDSHLLFRFSTVVTLTGGTLFLMWL
HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECHHHHHHHHHHHEECCCCEEEEHH
GEQITARGIGQGTSLIIMAGIVAELPAAISNTLELGRTGALPVLVIIGILVMSVAVVAFI
CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VFMERAQRRIIVQYPKRQVGNKMFGGESSHLPLKVNTSGVIPPIFASSILLMPVTIAQFT
HHHHHHHHHEEHCCCHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH
ASGGPEWLTTFTALMGRGQPLYLALYLSLIVFFSFFYTAVVFNPVDTAENLKKYGGFIPG
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
IRPGKNTSDYLDYVLTRLTVVGAAYLSVLSILPELLISKFSVPFYFGGTSLLIVVSVTMD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEHHHHH
TVAQVQSHLLAHQYEGLIKKSRLRGRR
HHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASAAEQLASNLNFGVLAKATELKKRIWFTLLALVVYRLGTWIPMPGVDPHVLGDLFKQS
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
GGGMLGMFDMLAGGALHRMTIFALNIMPYISASIILQLMTTVIPSLEAVKKEGESGRKKI
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NQYTRYLTVVIAVMQAYGIAVGLEGMTSSRGSAVMMDSHLLFRFSTVVTLTGGTLFLMWL
HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECHHHHHHHHHHHEECCCCEEEEHH
GEQITARGIGQGTSLIIMAGIVAELPAAISNTLELGRTGALPVLVIIGILVMSVAVVAFI
CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VFMERAQRRIIVQYPKRQVGNKMFGGESSHLPLKVNTSGVIPPIFASSILLMPVTIAQFT
HHHHHHHHHEEHCCCHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH
ASGGPEWLTTFTALMGRGQPLYLALYLSLIVFFSFFYTAVVFNPVDTAENLKKYGGFIPG
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
IRPGKNTSDYLDYVLTRLTVVGAAYLSVLSILPELLISKFSVPFYFGGTSLLIVVSVTMD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEHHHHH
TVAQVQSHLLAHQYEGLIKKSRLRGRR
HHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA