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The map label for this gene is tsr [C]

Identifier: 83312166

GI number: 83312166

Start: 3316407

End: 3318083

Strand: Reverse

Name: tsr [C]

Synonym: amb3067

Alternate gene names: 83312166

Gene position: 3318083-3316407 (Counterclockwise)

Preceding gene: 83312167

Following gene: 83312164

Centisome position: 66.8

GC content: 67.14

Gene sequence:

>1677_bases
ATGCTGGCAAAGTTGGGTATCGCAAATCGCCTGTTGGTGGGATTCGTCGTCCTAATCGCGTTGATCGCCGGCTTGGCGAC
CTTCTCCAGGATTTCGGCCGGTGACATCGCCGCCGCCGTGGCGGCAAGCCGGCGGGGCAGCGACAACGCCTTGGCGCTGG
AGAGCATCGAGCGGCACATCTACGAGGCGCGCTTCAATATCTGGGTGTATTTCGGCACCGACGACACCAGCCGCCTGCAG
AAGGGAATTTCCCTGACGAACGATCTGATCAAGGAGGTCGAGGCGCTGCATGCCGCCACCCTCTTCGCGCCGGAGCGTCA
GCGGCAGGTGCGCGAGATGGCCGAGCTGATCGCCGCCTACAAGGTCAGGGTCGAGAAGCTCAGCGAATTGAGGGCGCGAA
AGGCGGCCTTCGATGATCCAGAACTGGCGGCGTCCCGCAGTGACGCCGGAAAGATCAGCGCGGCCATCGACAAGATCGGC
GCCAGCCTGTCCGAGGGCTATCGCGCCACCTCCGATGCCGAGGCGGCCCAGGTTGAAAGCCTGATCGCCCTGGTCAGCCG
CCTGTCCGTCATCGTCGGATTGCTGGCTACCGTCTTCGGTCTGGTTCTCGCCCTGGCCATCGGTCGCAGCATCACCAATC
CCCTGGGGGATCTGGTGGGGGCGGTGCGTCGTCTGGCCGGAGGCGATACCGGCTTGGCCGTGCCGGGCGTGGAGCGCCGC
GACGAGTTCGGGCCGCTTGCCCAGGCCCTGAACGGCTGGCGGAGCAGCATCATGGAGGCCGCCGCCCGGGCGGAGGAGGA
GCGCCTGGCCCGGACCCAGCGCGAGGCCCGTCAGCAGGTCATCGAGGTGGCGACCCAGCGTTTCGACCAATCCATCGAGA
CCACCCTGAGCCGGGTCAAGGCCGCCGTTCAAGCGCTGCATGGTTCGGCCGACACCTTGTCGGCCAATGCCGAGCAGACC
CAGCGCCAGAGCAGCGCCGTCTCGACCGCCACCGACGAGGCGACGGCCAATGTGGGGACCGTGGCCTCAGCCAGCACGGA
ACTGGCCAGTTCCATCCACGAGATCTCGCGGCAGGTCCGTCAGTCCTCGGACATCGCCCAGGCCGCCGAGACCGAGGTCA
TGGAGGCGACGCGCAAGGTCACCGGCATGGCCGAGGCGGCGCAGCGGATTGGCAACGTGGTCAAGCTGATCAGCGACATC
GCCAGCCAGACCAACCTACTGGCCCTGAACGCCACCATCGAAAGCGCCCGGGCCGGCGACGCCGGCAAGGGATTCGCCGT
GGTGGCGCACGAGGTCAAGAATCTGGCTGGACAGACGGCCAAGGCCACGGAGGAGATCACCTTGCAGATCTCTGCGGTGC
AGGCGGAAACCCAGGCGGCGGTCGAGGCCATCTCGGGCATTTCCCATACCATCTCGCGCATCAATGAGCTGGCGACGGCC
ATCGCTGGGGCGGTCGAGGAGCAAGGCGCCGCCACGGCGGAAATCGCCCGCAACGTGGAACTGGCCAACGAAGGCACCAG
CGAGGTGGCCCGCAATATCGCCGGCGTCGCCCAGGCTGCCTCGGAAACCGGCGGCATGGCCCAGGCGGTGTTCACCTCGG
CCAACGGCCTGCTGGACGAGAGCGCCCGCCTGGAAAGCGAGGTGCGGGAATTCCTGACCAGCGTGCGGACAGCCTGA

Upstream 100 bases:

>100_bases
TATGGTTCTGGCTGGGTTTTGTAGGTGTATTTTGCTCGCACATTTAAACCTCAACCGGCCGTGATCGCCCAAGTGCGTCT
GGCAGACTAGGGAGAAAGCC

Downstream 100 bases:

>100_bases
TCCCGGCCTTGAAATGAAAGCGCCCCGGCCGCGAGGCCGGGGCGCTTTGAGGTTCGTGGCGAACCGGCTTAGCTCTGCGC
GGAGCCGCCGCCGGTCGAGG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MLAKLGIANRLLVGFVVLIALIAGLATFSRISAGDIAAAVAASRRGSDNALALESIERHIYEARFNIWVYFGTDDTSRLQ
KGISLTNDLIKEVEALHAATLFAPERQRQVREMAELIAAYKVRVEKLSELRARKAAFDDPELAASRSDAGKISAAIDKIG
ASLSEGYRATSDAEAAQVESLIALVSRLSVIVGLLATVFGLVLALAIGRSITNPLGDLVGAVRRLAGGDTGLAVPGVERR
DEFGPLAQALNGWRSSIMEAAARAEEERLARTQREARQQVIEVATQRFDQSIETTLSRVKAAVQALHGSADTLSANAEQT
QRQSSAVSTATDEATANVGTVASASTELASSIHEISRQVRQSSDIAQAAETEVMEATRKVTGMAEAAQRIGNVVKLISDI
ASQTNLLALNATIESARAGDAGKGFAVVAHEVKNLAGQTAKATEEITLQISAVQAETQAAVEAISGISHTISRINELATA
IAGAVEEQGAATAEIARNVELANEGTSEVARNIAGVAQAASETGGMAQAVFTSANGLLDESARLESEVREFLTSVRTA

Sequences:

>Translated_558_residues
MLAKLGIANRLLVGFVVLIALIAGLATFSRISAGDIAAAVAASRRGSDNALALESIERHIYEARFNIWVYFGTDDTSRLQ
KGISLTNDLIKEVEALHAATLFAPERQRQVREMAELIAAYKVRVEKLSELRARKAAFDDPELAASRSDAGKISAAIDKIG
ASLSEGYRATSDAEAAQVESLIALVSRLSVIVGLLATVFGLVLALAIGRSITNPLGDLVGAVRRLAGGDTGLAVPGVERR
DEFGPLAQALNGWRSSIMEAAARAEEERLARTQREARQQVIEVATQRFDQSIETTLSRVKAAVQALHGSADTLSANAEQT
QRQSSAVSTATDEATANVGTVASASTELASSIHEISRQVRQSSDIAQAAETEVMEATRKVTGMAEAAQRIGNVVKLISDI
ASQTNLLALNATIESARAGDAGKGFAVVAHEVKNLAGQTAKATEEITLQISAVQAETQAAVEAISGISHTISRINELATA
IAGAVEEQGAATAEIARNVELANEGTSEVARNIAGVAQAASETGGMAQAVFTSANGLLDESARLESEVREFLTSVRTA
>Mature_558_residues
MLAKLGIANRLLVGFVVLIALIAGLATFSRISAGDIAAAVAASRRGSDNALALESIERHIYEARFNIWVYFGTDDTSRLQ
KGISLTNDLIKEVEALHAATLFAPERQRQVREMAELIAAYKVRVEKLSELRARKAAFDDPELAASRSDAGKISAAIDKIG
ASLSEGYRATSDAEAAQVESLIALVSRLSVIVGLLATVFGLVLALAIGRSITNPLGDLVGAVRRLAGGDTGLAVPGVERR
DEFGPLAQALNGWRSSIMEAAARAEEERLARTQREARQQVIEVATQRFDQSIETTLSRVKAAVQALHGSADTLSANAEQT
QRQSSAVSTATDEATANVGTVASASTELASSIHEISRQVRQSSDIAQAAETEVMEATRKVTGMAEAAQRIGNVVKLISDI
ASQTNLLALNATIESARAGDAGKGFAVVAHEVKNLAGQTAKATEEITLQISAVQAETQAAVEAISGISHTISRINELATA
IAGAVEEQGAATAEIARNVELANEGTSEVARNIAGVAQAASETGGMAQAVFTSANGLLDESARLESEVREFLTSVRTA

Specific function: May bind attractants or detect changes in the extracellular concentration of soluble sugars [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=385, Percent_Identity=25.7142857142857, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1788194, Length=238, Percent_Identity=30.672268907563, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1788195, Length=306, Percent_Identity=26.4705882352941, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI1789453, Length=201, Percent_Identity=31.8407960199005, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1787690, Length=366, Percent_Identity=24.3169398907104, Blast_Score=83, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 58518; Mature: 58518

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAKLGIANRLLVGFVVLIALIAGLATFSRISAGDIAAAVAASRRGSDNALALESIERHI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
YEARFNIWVYFGTDDTSRLQKGISLTNDLIKEVEALHAATLFAPERQRQVREMAELIAAY
HHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KVRVEKLSELRARKAAFDDPELAASRSDAGKISAAIDKIGASLSEGYRATSDAEAAQVES
HHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LIALVSRLSVIVGLLATVFGLVLALAIGRSITNPLGDLVGAVRRLAGGDTGLAVPGVERR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DEFGPLAQALNGWRSSIMEAAARAEEERLARTQREARQQVIEVATQRFDQSIETTLSRVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVQALHGSADTLSANAEQTQRQSSAVSTATDEATANVGTVASASTELASSIHEISRQVR
HHHHHHCCCCHHCCCCHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QSSDIAQAAETEVMEATRKVTGMAEAAQRIGNVVKLISDIASQTNLLALNATIESARAGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHCCCC
AGKGFAVVAHEVKNLAGQTAKATEEITLQISAVQAETQAAVEAISGISHTISRINELATA
CCCCHHHHHHHHHHHHCCCHHCCHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGAVEEQGAATAEIARNVELANEGTSEVARNIAGVAQAASETGGMAQAVFTSANGLLDE
HHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH
SARLESEVREFLTSVRTA
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLAKLGIANRLLVGFVVLIALIAGLATFSRISAGDIAAAVAASRRGSDNALALESIERHI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
YEARFNIWVYFGTDDTSRLQKGISLTNDLIKEVEALHAATLFAPERQRQVREMAELIAAY
HHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KVRVEKLSELRARKAAFDDPELAASRSDAGKISAAIDKIGASLSEGYRATSDAEAAQVES
HHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LIALVSRLSVIVGLLATVFGLVLALAIGRSITNPLGDLVGAVRRLAGGDTGLAVPGVERR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DEFGPLAQALNGWRSSIMEAAARAEEERLARTQREARQQVIEVATQRFDQSIETTLSRVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVQALHGSADTLSANAEQTQRQSSAVSTATDEATANVGTVASASTELASSIHEISRQVR
HHHHHHCCCCHHCCCCHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QSSDIAQAAETEVMEATRKVTGMAEAAQRIGNVVKLISDIASQTNLLALNATIESARAGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHCCCC
AGKGFAVVAHEVKNLAGQTAKATEEITLQISAVQAETQAAVEAISGISHTISRINELATA
CCCCHHHHHHHHHHHHCCCHHCCHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGAVEEQGAATAEIARNVELANEGTSEVARNIAGVAQAASETGGMAQAVFTSANGLLDE
HHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH
SARLESEVREFLTSVRTA
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8436949 [H]