| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312030
Identifier: 83312030
GI number: 83312030
Start: 3127750
End: 3129444
Strand: Reverse
Name: 83312030
Synonym: amb2931
Alternate gene names: NA
Gene position: 3129444-3127750 (Counterclockwise)
Preceding gene: 83312031
Following gene: 83312029
Centisome position: 63.0
GC content: 65.07
Gene sequence:
>1695_bases ATGAAAGCCCTCTTGAATACCGTCGAGCGCCTCAGGCTCACCACCAAGCTGGTGATCGGCTTTTCCGCGGGCATCCTGGT GGCCCTGGTGATCGGCCTGACGTCTCTGTCCAGCCTGGGAGAGATCGAGGCCGATATGGAGCGGATGTATGAAACCGACC TGCTCGGCATTTCCCACGTCAAGGAAGCCAACATCAACCTGATCTACATGGGCCGCGCCATGCGCCAGATGATGATCGCT CAGGATGACGTGACTCGCGATAGGGCAAGAACCCAGGTGATGGCGGCGCGCGAGACTTTGCGGGCGGAGATGGCCGAGGC GCGCAAGGGGTTCTTCCGGCCGGAGACCCTTGCCCAGGACGAAAAGTTCACGACGAACTTCAGTAGGTTCAACGAGAATG TCGAACACGCCCTGGCCCTGATCGAGCGGGAAAAGGCCAACCCGTCGACGGCGGCCCGGTTCATCACCAGCACCGACTTC ATGAGCGTGGTCAATATGGCCGACGACGACCTGACCGCGCTAAGCAAGATCAAGGAGCGACAGTCCAAGGCGACGGTCGA GGAGGCCCGCCGCAAGAGCGACGGGGCCAAGCGGACCGCAGTCCTGTTCTTGGTCCTGGGCGCGATGCTGTCGGCGGCGC TGGGCGTACTGATCGGGGTCTCCATCACCGGTCCCAACCACCGCCTGAGCCGGTCGGTGGAGGAATTGGCGGCGGGAAAG GTCGAGGCGTCCATCCCCCATGCCGACTATCCCAACGAAATCGGCATCCTGGCCCGCTCCATCCGGGTGCTGCAGGACAT CTACCGCAAGGCTGACGAGCAGCATTGGGTGAAGTCCCATGTGGCGGAGATCGGGGCCGCTCTGCAGCGGGCCGACGACT TCGTTACCCTGACCCAGGACGCGGTGTCCCGAATCGCCCCGGTGATAGGGGCCGGACACGGCGCCTTCTACGTGGCCGAC GGACAGGGGGCCTACAGCCTGCTGGCCAGCTATGGCTACCGCGAGCGCAAGCACCTGAGCAATTGCTTTGCCGAGGGCGA GGGGCTGGTGGGCCAGTGCGTCGTCGAGAGGGCGACCATCGTGCTGACCGCGCCCAAGGACTATATCCGTATCGGGTCCG GCCTGGGCGAAGGTCCGCCCGCCTGCATCATGGTTCTGCCGGTCATTCACGGCGAGCGGGTGCTGGGTGTGCTGGAGGTG GCGTCGTTCCAGCCGTTCACGGCCCGCGAGCAGGCCGTGCTGGAAGCCCTGATGCCCATCTTGTCCGCCAGCCTGGAGAT TCTCGACCGCAATCTGCGTACCCGCGAGCTTCTGGCAGCCAGCCAGGAGCAGGCCGAGCGCATGGAAAAGCAGGCCGCCC AGTTGGAGGAGCAGCAGGTGGAGATGGAAGCGCAGCAGGCGGAATTGCTGGAAACCGAGAACTGGTTTCGCAGCATTATC GAGGCCGCACCCGACGGCATGATGGTCACGGATGAATCCGGTCGCATCCTGCTGGTCAATCCTGCCGCCGAGGCCCTGTT CGGCTATGACGCGGGCGAACTGGTCGGCGGCGACATCGACGCCGTGGTGTCGCCGGACCGCCGGATGGGGCTGCGCAAGG ACGGTGCCCGATTTCCGCTGGTCGCGTCGTCAAGCCCGCTGCCGCCACGCGGCACCCGGGGTCGCTGCGTCAGCTTGACG GTGCGGGCGGCGTAA
Upstream 100 bases:
>100_bases CCGAGTCCCTCAGCTTCATCGGGAATTCGTTGTTCGGCCCCGTCGACCACTACCACCGGCTGTTCCGTCGGCGCCGTTGA ACGTCTGGAAAGGACCCTCC
Downstream 100 bases:
>100_bases GAGGCAATGGTGATCACCACAACGGCAACCACCGGATAGGGCGGGACGAATGCGCGTATCGACGGTCGTCAGCCTCGGCA TGGGATTGGTGATTCTGGCC
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: Multi-Sensor Hybrid Histidine Kinase; Two-Component System Sensor Kinase; Sensor Histidine Kinase/Response Regulator; Methyl-Accepting Chemotaxis Sensory Transducer; Two-Component Hybrid Sensor And Regulator; Two-Component System Sensory Histidine Kinase; Signal Transduction Histidine Kinase; Sensor Histidine Kinase; Histidine Kinase Hamp Region Domain Protein; Pas Sensor Protein; Gaf Domain Protein; Methyl-Accepting Chemotaxis Protein; Sensory Histidine Kinase; Hybrid Signal Transduction Histidine Kinase J; Response Regulator Receiver Domain Protein; Histidine Kinase; Pas/Pac Sensor Protein; Sensor Histidine Kinase/Response Regulator Fusion Protein; Sensor Histidine Kinase/Respose Regulator; Complex Regulator Protein; Sensor Kinase; PAS/PAC Sensor Hybrid Histidine Kinase; Sensor Protein BarA; Sensor Protein GacS; Integral Membrane Sensor Hybrid Histidine Kinase; Two Component System Histidine Kinase; Two-Component Sensor Histidine Kinase/Response Regulator; Histidine Kinase/Response Regulator Hybrid Protein; Histidine Kinase Hybrid
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MKALLNTVERLRLTTKLVIGFSAGILVALVIGLTSLSSLGEIEADMERMYETDLLGISHVKEANINLIYMGRAMRQMMIA QDDVTRDRARTQVMAARETLRAEMAEARKGFFRPETLAQDEKFTTNFSRFNENVEHALALIEREKANPSTAARFITSTDF MSVVNMADDDLTALSKIKERQSKATVEEARRKSDGAKRTAVLFLVLGAMLSAALGVLIGVSITGPNHRLSRSVEELAAGK VEASIPHADYPNEIGILARSIRVLQDIYRKADEQHWVKSHVAEIGAALQRADDFVTLTQDAVSRIAPVIGAGHGAFYVAD GQGAYSLLASYGYRERKHLSNCFAEGEGLVGQCVVERATIVLTAPKDYIRIGSGLGEGPPACIMVLPVIHGERVLGVLEV ASFQPFTAREQAVLEALMPILSASLEILDRNLRTRELLAASQEQAERMEKQAAQLEEQQVEMEAQQAELLETENWFRSII EAAPDGMMVTDESGRILLVNPAAEALFGYDAGELVGGDIDAVVSPDRRMGLRKDGARFPLVASSSPLPPRGTRGRCVSLT VRAA
Sequences:
>Translated_564_residues MKALLNTVERLRLTTKLVIGFSAGILVALVIGLTSLSSLGEIEADMERMYETDLLGISHVKEANINLIYMGRAMRQMMIA QDDVTRDRARTQVMAARETLRAEMAEARKGFFRPETLAQDEKFTTNFSRFNENVEHALALIEREKANPSTAARFITSTDF MSVVNMADDDLTALSKIKERQSKATVEEARRKSDGAKRTAVLFLVLGAMLSAALGVLIGVSITGPNHRLSRSVEELAAGK VEASIPHADYPNEIGILARSIRVLQDIYRKADEQHWVKSHVAEIGAALQRADDFVTLTQDAVSRIAPVIGAGHGAFYVAD GQGAYSLLASYGYRERKHLSNCFAEGEGLVGQCVVERATIVLTAPKDYIRIGSGLGEGPPACIMVLPVIHGERVLGVLEV ASFQPFTAREQAVLEALMPILSASLEILDRNLRTRELLAASQEQAERMEKQAAQLEEQQVEMEAQQAELLETENWFRSII EAAPDGMMVTDESGRILLVNPAAEALFGYDAGELVGGDIDAVVSPDRRMGLRKDGARFPLVASSSPLPPRGTRGRCVSLT VRAA >Mature_564_residues MKALLNTVERLRLTTKLVIGFSAGILVALVIGLTSLSSLGEIEADMERMYETDLLGISHVKEANINLIYMGRAMRQMMIA QDDVTRDRARTQVMAARETLRAEMAEARKGFFRPETLAQDEKFTTNFSRFNENVEHALALIEREKANPSTAARFITSTDF MSVVNMADDDLTALSKIKERQSKATVEEARRKSDGAKRTAVLFLVLGAMLSAALGVLIGVSITGPNHRLSRSVEELAAGK VEASIPHADYPNEIGILARSIRVLQDIYRKADEQHWVKSHVAEIGAALQRADDFVTLTQDAVSRIAPVIGAGHGAFYVAD GQGAYSLLASYGYRERKHLSNCFAEGEGLVGQCVVERATIVLTAPKDYIRIGSGLGEGPPACIMVLPVIHGERVLGVLEV ASFQPFTAREQAVLEALMPILSASLEILDRNLRTRELLAASQEQAERMEKQAAQLEEQQVEMEAQQAELLETENWFRSII EAAPDGMMVTDESGRILLVNPAAEALFGYDAGELVGGDIDAVVSPDRRMGLRKDGARFPLVASSSPLPPRGTRGRCVSLT VRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61562; Mature: 61562
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS50885 HAMP ; PS50112 PAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALLNTVERLRLTTKLVIGFSAGILVALVIGLTSLSSLGEIEADMERMYETDLLGISHV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEANINLIYMGRAMRQMMIAQDDVTRDRARTQVMAARETLRAEMAEARKGFFRPETLAQD HHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC EKFTTNFSRFNENVEHALALIEREKANPSTAARFITSTDFMSVVNMADDDLTALSKIKER CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH QSKATVEEARRKSDGAKRTAVLFLVLGAMLSAALGVLIGVSITGPNHRLSRSVEELAAGK HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCC VEASIPHADYPNEIGILARSIRVLQDIYRKADEQHWVKSHVAEIGAALQRADDFVTLTQD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEHHH AVSRIAPVIGAGHGAFYVADGQGAYSLLASYGYRERKHLSNCFAEGEGLVGQCVVERATI HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHCCCEE VLTAPKDYIRIGSGLGEGPPACIMVLPVIHGERVLGVLEVASFQPFTAREQAVLEALMPI EEECCHHHHHCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH LSASLEILDRNLRTRELLAASQEQAERMEKQAAQLEEQQVEMEAQQAELLETENWFRSII HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAPDGMMVTDESGRILLVNPAAEALFGYDAGELVGGDIDAVVSPDRRMGLRKDGARFPL HHCCCCEEEECCCCCEEEECCHHHHHHCCCCHHHCCCCCHHEECCHHHCCCCCCCCCCCE VASSSPLPPRGTRGRCVSLTVRAA EECCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MKALLNTVERLRLTTKLVIGFSAGILVALVIGLTSLSSLGEIEADMERMYETDLLGISHV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEANINLIYMGRAMRQMMIAQDDVTRDRARTQVMAARETLRAEMAEARKGFFRPETLAQD HHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC EKFTTNFSRFNENVEHALALIEREKANPSTAARFITSTDFMSVVNMADDDLTALSKIKER CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH QSKATVEEARRKSDGAKRTAVLFLVLGAMLSAALGVLIGVSITGPNHRLSRSVEELAAGK HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCC VEASIPHADYPNEIGILARSIRVLQDIYRKADEQHWVKSHVAEIGAALQRADDFVTLTQD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEHHH AVSRIAPVIGAGHGAFYVADGQGAYSLLASYGYRERKHLSNCFAEGEGLVGQCVVERATI HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHCCCEE VLTAPKDYIRIGSGLGEGPPACIMVLPVIHGERVLGVLEVASFQPFTAREQAVLEALMPI EEECCHHHHHCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH LSASLEILDRNLRTRELLAASQEQAERMEKQAAQLEEQQVEMEAQQAELLETENWFRSII HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAPDGMMVTDESGRILLVNPAAEALFGYDAGELVGGDIDAVVSPDRRMGLRKDGARFPL HHCCCCEEEECCCCCEEEECCHHHHHHCCCCHHHCCCCCHHEECCHHHCCCCCCCCCCCE VASSSPLPPRGTRGRCVSLTVRAA EECCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA