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The map label for this gene is 83311934

Identifier: 83311934

GI number: 83311934

Start: 3030468

End: 3031811

Strand: Reverse

Name: 83311934

Synonym: amb2835

Alternate gene names: NA

Gene position: 3031811-3030468 (Counterclockwise)

Preceding gene: 162319786

Following gene: 83311931

Centisome position: 61.04

GC content: 66.15

Gene sequence:

>1344_bases
TTGACGCGCCCAAGGATCGCCGTGGCGGCCGCCGTTGCTCTGGCCGTGCTCGGCCTGTCGGCCTGCGAAACCAGAACGGG
AAAGGCGCTGGGCAGTTCCGCCCAGGCCGCTGGCGAGGGCAAGGTGGTGGAGTCCGCCGTCTCCCTGGCCGTGGCGCCCC
TGGGCGTGGCCATCGACGCCGTCGATCTTCTGTTCAATGGCTTCAAGGGCGAGACCGCGACGGCGATCAGGAACTCGCTG
CCCAGTGATTCCGCCGTGCCGTCGCCCCAGATTGCCCAGGATACGAAGGCGCCGCCATCCATCGTCGTCGAGCCCGTCGG
AACCACCACGGAACAGGTGGTGGAAATAAAGGGAGCCATTTCCAGCCAGGGAAAAATCACCTCGGCCCGCATCAACGGGA
CGGACGTCACCGTGATGCCCGATGGCCGTTTCGCTGTCCGGCGCGGTGTTCAATTGGGTGACAACGTGCTGCAATTGACT
GCCACCGACGAGTGGGGGCAGACCTCCGAGACGACGATCAGCGTCAACCGGCAGGTGGCGCCCGACCAGAGTCGGCTTGC
CGCCCTGGTGCCGGAGAGCCTTCGCGGTGCGCCGCGCCCCCAGTCCATCGCCATCATCGTCGGCATTCAGGATTACGAGA
CTCTCCCCAAGGCCGAGTTTGCGGAAAACGACGCCCGCCGATTCTATGATTATGCCACCAACGCCCTGGGCGTTCCGCCC
GATCGGGTGAAGCTGATCACCGGGGCCGACGCCCGCCTGATCACCTTGCGCAAGGCTTTGCACAATTGGTCTAAGCCGTT
GATCGTCCGGGGACAGACCGAGGTCTTCGTCTTCTTCGCCGGCCATGGCCTGGCGTCGGAGGACGGGGGCGAGCTTTACC
TGCTGCCCTATGATGGGGATCGTACCCTGCTGGCCGGCAGCAGTCTGCGGCGCCGCGAGATTGTCGAGCAGGTCACGGAG
GCCGGGGCCTCATCCGTGACGCTGTTCCTGGACACCTGCTACTCGGGCAGTGCCCGGGGCGGCGAGACCTTGCTGGCGGG
AGCGCGGCCGGTCACCATCGTGCCCAAGGCCGAGGACCTGCCCGCCAACGTCACCGTGTTTTCAGCCACCACCCGGGATC
AGGTCGCTCACAGTCTGCCGGCGGCCCGGCATGGCCTGTTCAGCTACTATCTCATGAAGGGGCTGGAAAGCGGGGCCGTG
GATGTCCGGAACCAGGTCACGGCGGAATCGCTGGAAAGTTACCTGATCGGGGCGATCCCGGCCCAGGCCGCACGGCAAGG
CGGGCGGCAGATGCCGCAAATGGCGGGGCCGGGAACAAGCGTCATCGCGAAATACTCGCCCTAG

Upstream 100 bases:

>100_bases
TGGGCGCGGCCGCTGACACGCCACTCCGAGTTTCCGTCTTTCGGCCGGGATGGGGGAAGGCTATCATCGCGACAACCGCG
CTTCTTATGGGGGGGAGCCT

Downstream 100 bases:

>100_bases
AGTGCGTCAACTTCGGGCTGAAGAACTCTAGGCGCTCAACTTCATCGGTGGTTGGGCCTGCCAGCTCAGCTTGGCCAGGG
CGTTCTCGGCGATGCGGACC

Product: caspase domain-containing protein

Products: NA

Alternate protein names: Polysaccharide Deacetylase; Ankyrin; Caspase Domain-Containing Protein; Polysaccharide Deacetylase Family Protein; Caspase Domain Protein

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MTRPRIAVAAAVALAVLGLSACETRTGKALGSSAQAAGEGKVVESAVSLAVAPLGVAIDAVDLLFNGFKGETATAIRNSL
PSDSAVPSPQIAQDTKAPPSIVVEPVGTTTEQVVEIKGAISSQGKITSARINGTDVTVMPDGRFAVRRGVQLGDNVLQLT
ATDEWGQTSETTISVNRQVAPDQSRLAALVPESLRGAPRPQSIAIIVGIQDYETLPKAEFAENDARRFYDYATNALGVPP
DRVKLITGADARLITLRKALHNWSKPLIVRGQTEVFVFFAGHGLASEDGGELYLLPYDGDRTLLAGSSLRRREIVEQVTE
AGASSVTLFLDTCYSGSARGGETLLAGARPVTIVPKAEDLPANVTVFSATTRDQVAHSLPAARHGLFSYYLMKGLESGAV
DVRNQVTAESLESYLIGAIPAQAARQGGRQMPQMAGPGTSVIAKYSP

Sequences:

>Translated_447_residues
MTRPRIAVAAAVALAVLGLSACETRTGKALGSSAQAAGEGKVVESAVSLAVAPLGVAIDAVDLLFNGFKGETATAIRNSL
PSDSAVPSPQIAQDTKAPPSIVVEPVGTTTEQVVEIKGAISSQGKITSARINGTDVTVMPDGRFAVRRGVQLGDNVLQLT
ATDEWGQTSETTISVNRQVAPDQSRLAALVPESLRGAPRPQSIAIIVGIQDYETLPKAEFAENDARRFYDYATNALGVPP
DRVKLITGADARLITLRKALHNWSKPLIVRGQTEVFVFFAGHGLASEDGGELYLLPYDGDRTLLAGSSLRRREIVEQVTE
AGASSVTLFLDTCYSGSARGGETLLAGARPVTIVPKAEDLPANVTVFSATTRDQVAHSLPAARHGLFSYYLMKGLESGAV
DVRNQVTAESLESYLIGAIPAQAARQGGRQMPQMAGPGTSVIAKYSP
>Mature_446_residues
TRPRIAVAAAVALAVLGLSACETRTGKALGSSAQAAGEGKVVESAVSLAVAPLGVAIDAVDLLFNGFKGETATAIRNSLP
SDSAVPSPQIAQDTKAPPSIVVEPVGTTTEQVVEIKGAISSQGKITSARINGTDVTVMPDGRFAVRRGVQLGDNVLQLTA
TDEWGQTSETTISVNRQVAPDQSRLAALVPESLRGAPRPQSIAIIVGIQDYETLPKAEFAENDARRFYDYATNALGVPPD
RVKLITGADARLITLRKALHNWSKPLIVRGQTEVFVFFAGHGLASEDGGELYLLPYDGDRTLLAGSSLRRREIVEQVTEA
GASSVTLFLDTCYSGSARGGETLLAGARPVTIVPKAEDLPANVTVFSATTRDQVAHSLPAARHGLFSYYLMKGLESGAVD
VRNQVTAESLESYLIGAIPAQAARQGGRQMPQMAGPGTSVIAKYSP

Specific function: Unknown

COG id: COG4249

COG function: function code R; Uncharacterized protein containing caspase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46917; Mature: 46785

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPRIAVAAAVALAVLGLSACETRTGKALGSSAQAAGEGKVVESAVSLAVAPLGVAIDA
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VDLLFNGFKGETATAIRNSLPSDSAVPSPQIAQDTKAPPSIVVEPVGTTTEQVVEIKGAI
HHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCC
SSQGKITSARINGTDVTVMPDGRFAVRRGVQLGDNVLQLTATDEWGQTSETTISVNRQVA
CCCCCEEEEEECCCEEEEECCCCHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCC
PDQSRLAALVPESLRGAPRPQSIAIIVGIQDYETLPKAEFAENDARRFYDYATNALGVPP
CCHHHHHHHCCHHHCCCCCCCEEEEEEEECCCCCCCCHHHHCCHHHHHHHHHCCCCCCCC
DRVKLITGADARLITLRKALHNWSKPLIVRGQTEVFVFFAGHGLASEDGGELYLLPYDGD
CCEEEEECCCCHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEEEECCC
RTLLAGSSLRRREIVEQVTEAGASSVTLFLDTCYSGSARGGETLLAGARPVTIVPKAEDL
CEEEECCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEECCCCEEEECCCCCC
PANVTVFSATTRDQVAHSLPAARHGLFSYYLMKGLESGAVDVRNQVTAESLESYLIGAIP
CCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
AQAARQGGRQMPQMAGPGTSVIAKYSP
HHHHHHCCCCCCHHCCCCCEEEEECCC
>Mature Secondary Structure 
TRPRIAVAAAVALAVLGLSACETRTGKALGSSAQAAGEGKVVESAVSLAVAPLGVAIDA
CCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VDLLFNGFKGETATAIRNSLPSDSAVPSPQIAQDTKAPPSIVVEPVGTTTEQVVEIKGAI
HHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCC
SSQGKITSARINGTDVTVMPDGRFAVRRGVQLGDNVLQLTATDEWGQTSETTISVNRQVA
CCCCCEEEEEECCCEEEEECCCCHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCC
PDQSRLAALVPESLRGAPRPQSIAIIVGIQDYETLPKAEFAENDARRFYDYATNALGVPP
CCHHHHHHHCCHHHCCCCCCCEEEEEEEECCCCCCCCHHHHCCHHHHHHHHHCCCCCCCC
DRVKLITGADARLITLRKALHNWSKPLIVRGQTEVFVFFAGHGLASEDGGELYLLPYDGD
CCEEEEECCCCHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEEEECCC
RTLLAGSSLRRREIVEQVTEAGASSVTLFLDTCYSGSARGGETLLAGARPVTIVPKAEDL
CEEEECCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEECCCCEEEECCCCCC
PANVTVFSATTRDQVAHSLPAARHGLFSYYLMKGLESGAVDVRNQVTAESLESYLIGAIP
CCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
AQAARQGGRQMPQMAGPGTSVIAKYSP
HHHHHHCCCCCCHHCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA