| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311930
Identifier: 83311930
GI number: 83311930
Start: 3027503
End: 3028567
Strand: Reverse
Name: 83311930
Synonym: amb2831
Alternate gene names: NA
Gene position: 3028567-3027503 (Counterclockwise)
Preceding gene: 83311931
Following gene: 83311927
Centisome position: 60.97
GC content: 67.89
Gene sequence:
>1065_bases TTGACCACGTCCCAGCCCGCCGTGTCCGGCGAGGAGATCGCGCGCCTTGGCGCCCTTGCCGCCGATTTTCGCCGTCGCCT GGAGTTTGATCCGGGCATCGTCTATCCCGCCCATGCGGAATGCCTGTGGCAGTTGGGCAACTTGCAGATCGCCCAGGGCG ATACCGAGGCGGGATTGCTGGCCCTGTCGGAAGCCATCGGGCTTTACCGGGCCATCGCCCAGGTTCAGCCGGATTCTTAC GCGGTTCAACTGGCGTCGCTGCTCAATTCCCAATCCAACATGCTGGCCGAGGGCTCCCATCTGGAGGAGGCCCTTGCCGT GGGCGCCGATGCGGTGGACCATGCCCGCCGGGCCATGGGGGATTATGGCGACCAGGCCCGCTTCGTCCTGGTCTCATCCC TGATCAATCTGGCCGGGCTCAAGATGCGCAGCGGCGACACCGCCGGCACCGTCGATGAACTGGCCCAGGCCGTCGAGGTG TTCCGTGATGGCGGCAGTGCCGGCCAGCCCTTCCTGGGCTCCATGGTCGAAGCCCTGCACCGGGCCGCCATGGCGTTCAC CGAGGTGGCGCTGTGGGCCGAGGCCATCGATACCCGCCGTCTGCTGGTCGGCCTGTTCGGCGACGGTCCACCAGCCGCCG TGGTGCAGTTGCTGGTGCTGACCTTGCAGCAGGCTTCGGTCGGTCTGGCCCGGAGCGGCGATACCGACACGGCTCTGGTT CATGCCAAGGAGGCCGTCGACCTGGCCCGGACGCTGTTTCATGCCGATGGCGTGGCGTATCGCCTGGCCCTGGCCCAGGC GCTGGGAAATCTGGCCGGGCGTCACCACGATGCCGGCCTGCTCAAGCGGGGACTCGACCTTTCCCTGGAGGCGGTGGACC TGTTTCACGAGGCGGTCAGCGTCGATCCGGTCCACGCGGTGCCGTCGCTGATCATGACCCTGGACAGCATGGCCGGTATC CTGGAGGCGCTCGGCCTGCCGGAGCAGGCGGGCACCGTGCGCGACCAGCGGGTCCAGTTGCAGGAAACCCTAGAGATCAT CGCCCCGCGGGGCGGGGTGGGGTAA
Upstream 100 bases:
>100_bases AACGAAGTGTTAACCATGCTCCCTTAGACTATCGCGCGAGCGCAACGCGCTCGGGGTTACGTCCGGGCCCAGAAGGGGCC TCGCGAAAAGGAGAATCCGT
Downstream 100 bases:
>100_bases CGCCCTTCAGGCGAAGCGAAAGCCGTTGCCGCCCTGGCGCTTGACCGCGTACATGGCCGAATCCGCCAGACGCAGCATCT CCGCCGGTGAGTCCGTGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Family
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MTTSQPAVSGEEIARLGALAADFRRRLEFDPGIVYPAHAECLWQLGNLQIAQGDTEAGLLALSEAIGLYRAIAQVQPDSY AVQLASLLNSQSNMLAEGSHLEEALAVGADAVDHARRAMGDYGDQARFVLVSSLINLAGLKMRSGDTAGTVDELAQAVEV FRDGGSAGQPFLGSMVEALHRAAMAFTEVALWAEAIDTRRLLVGLFGDGPPAAVVQLLVLTLQQASVGLARSGDTDTALV HAKEAVDLARTLFHADGVAYRLALAQALGNLAGRHHDAGLLKRGLDLSLEAVDLFHEAVSVDPVHAVPSLIMTLDSMAGI LEALGLPEQAGTVRDQRVQLQETLEIIAPRGGVG
Sequences:
>Translated_354_residues MTTSQPAVSGEEIARLGALAADFRRRLEFDPGIVYPAHAECLWQLGNLQIAQGDTEAGLLALSEAIGLYRAIAQVQPDSY AVQLASLLNSQSNMLAEGSHLEEALAVGADAVDHARRAMGDYGDQARFVLVSSLINLAGLKMRSGDTAGTVDELAQAVEV FRDGGSAGQPFLGSMVEALHRAAMAFTEVALWAEAIDTRRLLVGLFGDGPPAAVVQLLVLTLQQASVGLARSGDTDTALV HAKEAVDLARTLFHADGVAYRLALAQALGNLAGRHHDAGLLKRGLDLSLEAVDLFHEAVSVDPVHAVPSLIMTLDSMAGI LEALGLPEQAGTVRDQRVQLQETLEIIAPRGGVG >Mature_353_residues TTSQPAVSGEEIARLGALAADFRRRLEFDPGIVYPAHAECLWQLGNLQIAQGDTEAGLLALSEAIGLYRAIAQVQPDSYA VQLASLLNSQSNMLAEGSHLEEALAVGADAVDHARRAMGDYGDQARFVLVSSLINLAGLKMRSGDTAGTVDELAQAVEVF RDGGSAGQPFLGSMVEALHRAAMAFTEVALWAEAIDTRRLLVGLFGDGPPAAVVQLLVLTLQQASVGLARSGDTDTALVH AKEAVDLARTLFHADGVAYRLALAQALGNLAGRHHDAGLLKRGLDLSLEAVDLFHEAVSVDPVHAVPSLIMTLDSMAGIL EALGLPEQAGTVRDQRVQLQETLEIIAPRGGVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37217; Mature: 37086
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSQPAVSGEEIARLGALAADFRRRLEFDPGIVYPAHAECLWQLGNLQIAQGDTEAGLL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHCCEEEECCCCHHHHH ALSEAIGLYRAIAQVQPDSYAVQLASLLNSQSNMLAEGSHLEEALAVGADAVDHARRAMG HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHCCHHHHHHHHHHH DYGDQARFVLVSSLINLAGLKMRSGDTAGTVDELAQAVEVFRDGGSAGQPFLGSMVEALH CCCCHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH RAAMAFTEVALWAEAIDTRRLLVGLFGDGPPAAVVQLLVLTLQQASVGLARSGDTDTALV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH HAKEAVDLARTLFHADGVAYRLALAQALGNLAGRHHDAGLLKRGLDLSLEAVDLFHEAVS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHC VDPVHAVPSLIMTLDSMAGILEALGLPEQAGTVRDQRVQLQETLEIIAPRGGVG CCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TTSQPAVSGEEIARLGALAADFRRRLEFDPGIVYPAHAECLWQLGNLQIAQGDTEAGLL CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHCCEEEECCCCHHHHH ALSEAIGLYRAIAQVQPDSYAVQLASLLNSQSNMLAEGSHLEEALAVGADAVDHARRAMG HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHCCHHHHHHHHHHH DYGDQARFVLVSSLINLAGLKMRSGDTAGTVDELAQAVEVFRDGGSAGQPFLGSMVEALH CCCCHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH RAAMAFTEVALWAEAIDTRRLLVGLFGDGPPAAVVQLLVLTLQQASVGLARSGDTDTALV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH HAKEAVDLARTLFHADGVAYRLALAQALGNLAGRHHDAGLLKRGLDLSLEAVDLFHEAVS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHC VDPVHAVPSLIMTLDSMAGILEALGLPEQAGTVRDQRVQLQETLEIIAPRGGVG CCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA