Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is napG

Identifier: 83311788

GI number: 83311788

Start: 2880421

End: 2881248

Strand: Reverse

Name: napG

Synonym: amb2689

Alternate gene names: 83311788

Gene position: 2881248-2880421 (Counterclockwise)

Preceding gene: 83311789

Following gene: 83311787

Centisome position: 58.01

GC content: 66.91

Gene sequence:

>828_bases
ATGGCCAGGCACCACAAGACCAGTGGAGATGCTGTTGACCAGAACCGGCGAGCCATGCTGGCCGGAACGGTCAAGGGCGC
CTGCACGGTCGGGCTGCTGGGTGCGCTTCTGGCCATTCCCGCCCGGCGCCGGGCCGAGGCGGTGGCGCTGCGGCCGCCCG
GGGCGGTGGCCGAGACCGATTTTCTCGCCGCCTGCGTCCGCTGCGGGCTGTGCGTCAAGGATTGTCCCTACGATACGCTG
AGGCTGTCCGATCTGGGCGACGGCCCGGCCACCGGCACTCCGTTCTTCAATGCCCGCAAGGTCCCTTGCGAGATGTGCGA
GACCATCCCCTGTGTCGCCGCCTGCCCGACGGGCGCGCTGGACAAGGGGCTGAAGGATATCAAGAACGCCAAGATGGGCG
TGGCGGTCCTAGTGGGGCAGGAGGCCTGCCTGAATTTCCTGGGGCTGCGCTGCGACGTCTGCTATCGGGTGTGCCCGCGC
ATCGGCGAGGCCATCACCCTGGAACTCAGCCACAACGTCCGCACCGCTAAGCACGCCTTCTTCATTCCCACCGTGCATTC
GTCCAAGTGCACCGGCTGTGGCAAATGCGAGCGGGCCTGCGTTCTCGACGAGGCGGCCATCAAGGTGCTGCCCCATGTCC
TGGCCACCGGCCAGCTGGGCAAGCATTACCGCCTGGGCTGGGAGGAAAAAAGGAGCGCCGGCGGTTCGCTGGTCGAGCCC
AGCCCCGAGGTGCAGGTGCGCGGCATGGAGGGCGTCGAGATGAGCCCCGGCGGCACCTATAAGCTTGAAAAGCGTCCCGA
TGGCGGCTTCAAGGAGTTCAAGCCATGA

Upstream 100 bases:

>100_bases
CGGACTACAAGAAGTGCGCCGTCAAGGTCAGCAAGGCCTAGGAAAGAGGGTCGGGGCCGGTCCCTGACGGACGGCCCCGA
CCATCGGAGAACCAGACATC

Downstream 100 bases:

>100_bases
GCGCCGCCAACACCACCCATTCCGGGCTGGGCAATCCCGGCGCCTCGGCCGTGGCCGCCAAGGGCTGGTTGGCCGCCAAC
AAGTGGCTGCTGGCCCGGCG

Product: quinol dehydrogenase periplasmic component

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MARHHKTSGDAVDQNRRAMLAGTVKGACTVGLLGALLAIPARRRAEAVALRPPGAVAETDFLAACVRCGLCVKDCPYDTL
RLSDLGDGPATGTPFFNARKVPCEMCETIPCVAACPTGALDKGLKDIKNAKMGVAVLVGQEACLNFLGLRCDVCYRVCPR
IGEAITLELSHNVRTAKHAFFIPTVHSSKCTGCGKCERACVLDEAAIKVLPHVLATGQLGKHYRLGWEEKRSAGGSLVEP
SPEVQVRGMEGVEMSPGGTYKLEKRPDGGFKEFKP

Sequences:

>Translated_275_residues
MARHHKTSGDAVDQNRRAMLAGTVKGACTVGLLGALLAIPARRRAEAVALRPPGAVAETDFLAACVRCGLCVKDCPYDTL
RLSDLGDGPATGTPFFNARKVPCEMCETIPCVAACPTGALDKGLKDIKNAKMGVAVLVGQEACLNFLGLRCDVCYRVCPR
IGEAITLELSHNVRTAKHAFFIPTVHSSKCTGCGKCERACVLDEAAIKVLPHVLATGQLGKHYRLGWEEKRSAGGSLVEP
SPEVQVRGMEGVEMSPGGTYKLEKRPDGGFKEFKP
>Mature_274_residues
ARHHKTSGDAVDQNRRAMLAGTVKGACTVGLLGALLAIPARRRAEAVALRPPGAVAETDFLAACVRCGLCVKDCPYDTLR
LSDLGDGPATGTPFFNARKVPCEMCETIPCVAACPTGALDKGLKDIKNAKMGVAVLVGQEACLNFLGLRCDVCYRVCPRI
GEAITLELSHNVRTAKHAFFIPTVHSSKCTGCGKCERACVLDEAAIKVLPHVLATGQLGKHYRLGWEEKRSAGGSLVEPS
PEVQVRGMEGVEMSPGGTYKLEKRPDGGFKEFKP

Specific function: Involved in electron transfer (Probable) [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788533, Length=224, Percent_Identity=59.375, Blast_Score=268, Evalue=2e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004494
- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29292; Mature: 29161

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARHHKTSGDAVDQNRRAMLAGTVKGACTVGLLGALLAIPARRRAEAVALRPPGAVAETD
CCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHH
FLAACVRCGLCVKDCPYDTLRLSDLGDGPATGTPFFNARKVPCEMCETIPCVAACPTGAL
HHHHHHHCCCCHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHCCCCCHH
DKGLKDIKNAKMGVAVLVGQEACLNFLGLRCDVCYRVCPRIGEAITLELSHNVRTAKHAF
HHHHHHHHHCCCCEEEEECHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEE
FIPTVHSSKCTGCGKCERACVLDEAAIKVLPHVLATGQLGKHYRLGWEEKRSAGGSLVEP
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCC
SPEVQVRGMEGVEMSPGGTYKLEKRPDGGFKEFKP
CCCEEEECCCCCEECCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
ARHHKTSGDAVDQNRRAMLAGTVKGACTVGLLGALLAIPARRRAEAVALRPPGAVAETD
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHH
FLAACVRCGLCVKDCPYDTLRLSDLGDGPATGTPFFNARKVPCEMCETIPCVAACPTGAL
HHHHHHHCCCCHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHCCCCCHH
DKGLKDIKNAKMGVAVLVGQEACLNFLGLRCDVCYRVCPRIGEAITLELSHNVRTAKHAF
HHHHHHHHHCCCCEEEEECHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEE
FIPTVHSSKCTGCGKCERACVLDEAAIKVLPHVLATGQLGKHYRLGWEEKRSAGGSLVEP
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCC
SPEVQVRGMEGVEMSPGGTYKLEKRPDGGFKEFKP
CCCEEEECCCCCEECCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]