| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is 83311683
Identifier: 83311683
GI number: 83311683
Start: 2769089
End: 2770183
Strand: Reverse
Name: 83311683
Synonym: amb2584
Alternate gene names: NA
Gene position: 2770183-2769089 (Counterclockwise)
Preceding gene: 83311684
Following gene: 83311676
Centisome position: 55.77
GC content: 62.92
Gene sequence:
>1095_bases ATGCAGCGACGTAAATTTCTGACTGGAGCGGCGGTAGGCGCCGCCGCCGCCTCGACGACCATCGCGGCCCCGGCCATCGC GCAGAGCATGCCCGAGATCAAGTGGCGCCTGGCCTCCAGCTTCCCCAAGAGCCTGGATACCATCTATGGCGCCGGTGAGG TTCTGGCCAAGCGGGTGGCCGAGGCCACCGACGGCAAGTTCCAGATCCGGGTCTTCGCCGGCGGCGAGATCGTGCCCGGT CTGCAGGTCCTCGATGCCGTGCAGAACGGCACCGTCGAATGCGGCCACACCGTCAGCTACTACTATGTGGGCAAGGACGC CACCTTTGGCTTCGACGCCTCCATGCCCTTCGGCGCCAATACCCGCCAGCAGAATTCCTGGTTGTACCATGGCGGCGGCA TGGCGCTGATGCGCGAGTTCTTCGCCAAGTACAACATGCTGAACTTCCCCTGCGGCAATACCGGCACCCAGATGGGCGGC TGGTTCCGCAAGGAGATCAAGACGGTCGAGGACCTCAAGGGCCTCAAGTTCCGTATCGGCGGCTATGCCGGCAAGGTGTT GACCAAGCTGGGCGTGGTGCCGCAGCAGATCGCCGGCGGCGATCTCTATCCCGCCCTGGAAAAGGGCACCATCGATGCCG CCGAATGGGTCGGCCCCTATGACGACGAGAAACTGGGATTCAACAAGGTGGCGCCCTACTACTACTACCCCGGCTGGTGG GAAGGCGGCCCCTGCGTTTCGGCCCTGGTCAACAAGAACGAGTGGGAAAAGCTGCCCAAGCACTACAAGGCGGTGTTCGA GGCGGCGGCGGCCGAGGCCAATCTGGACATGAGCGCCAAGTACGACGTGCTCAATCCGCCGGCCCTCAAGCGCCTGATCG CCAACGGCACCCAGCTGCGTCCGTTCTCCAAGGACATCATGCTGGCCTGCTACAAGGCGGCTCAGGAGACTTATGCCGAG GAATGCGCGGCTAATCCCGCCTTCAAGAAGGTCTTCGACCATTGGAGCGCCTATCTGGCCGAACAGCGTTCCTGGTTCAG CGTCGCCGAGGCCGGCTTCGACAATTTCATGCTCTACGGCATTCCCAAGAAGTAA
Upstream 100 bases:
>100_bases TCCGAAGTGGCCGGTCGCGTTGCGTCCCCCTTGCATTGGTGTAGGATAATTTCCACCTGATCCGGATCAACCGGCAAAAG TTTTCTGGGAGGAGACTTTA
Downstream 100 bases:
>100_bases TCCCGGGATGGCCTGAACGGGGAAAGCCCCGCACCGGAAGGTGCGGGGCTTTTTCATTGCGGCACGATTGCCTTACTTGC TATCGGGGCCGCCATACATG
Product: TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Transporter DctP Subunit; Tat Pathway Signal Sequence Domain-Containing Protein; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; Trap-T Transport System Periplasmic Component; TRAP Dicarboxylate Transporter-DctP Subunit; C4-Dicarboxylate Transporter; TRAP Transporter; Tat Pathway Signal Sequence Domain-Containing; TRAP Dicarboxylate Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MQRRKFLTGAAVGAAAASTTIAAPAIAQSMPEIKWRLASSFPKSLDTIYGAGEVLAKRVAEATDGKFQIRVFAGGEIVPG LQVLDAVQNGTVECGHTVSYYYVGKDATFGFDASMPFGANTRQQNSWLYHGGGMALMREFFAKYNMLNFPCGNTGTQMGG WFRKEIKTVEDLKGLKFRIGGYAGKVLTKLGVVPQQIAGGDLYPALEKGTIDAAEWVGPYDDEKLGFNKVAPYYYYPGWW EGGPCVSALVNKNEWEKLPKHYKAVFEAAAAEANLDMSAKYDVLNPPALKRLIANGTQLRPFSKDIMLACYKAAQETYAE ECAANPAFKKVFDHWSAYLAEQRSWFSVAEAGFDNFMLYGIPKK
Sequences:
>Translated_364_residues MQRRKFLTGAAVGAAAASTTIAAPAIAQSMPEIKWRLASSFPKSLDTIYGAGEVLAKRVAEATDGKFQIRVFAGGEIVPG LQVLDAVQNGTVECGHTVSYYYVGKDATFGFDASMPFGANTRQQNSWLYHGGGMALMREFFAKYNMLNFPCGNTGTQMGG WFRKEIKTVEDLKGLKFRIGGYAGKVLTKLGVVPQQIAGGDLYPALEKGTIDAAEWVGPYDDEKLGFNKVAPYYYYPGWW EGGPCVSALVNKNEWEKLPKHYKAVFEAAAAEANLDMSAKYDVLNPPALKRLIANGTQLRPFSKDIMLACYKAAQETYAE ECAANPAFKKVFDHWSAYLAEQRSWFSVAEAGFDNFMLYGIPKK >Mature_364_residues MQRRKFLTGAAVGAAAASTTIAAPAIAQSMPEIKWRLASSFPKSLDTIYGAGEVLAKRVAEATDGKFQIRVFAGGEIVPG LQVLDAVQNGTVECGHTVSYYYVGKDATFGFDASMPFGANTRQQNSWLYHGGGMALMREFFAKYNMLNFPCGNTGTQMGG WFRKEIKTVEDLKGLKFRIGGYAGKVLTKLGVVPQQIAGGDLYPALEKGTIDAAEWVGPYDDEKLGFNKVAPYYYYPGWW EGGPCVSALVNKNEWEKLPKHYKAVFEAAAAEANLDMSAKYDVLNPPALKRLIANGTQLRPFSKDIMLACYKAAQETYAE ECAANPAFKKVFDHWSAYLAEQRSWFSVAEAGFDNFMLYGIPKK
Specific function: Unknown
COG id: COG4663
COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39994; Mature: 39994
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRKFLTGAAVGAAAASTTIAAPAIAQSMPEIKWRLASSFPKSLDTIYGAGEVLAKRVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHH EATDGKFQIRVFAGGEIVPGLQVLDAVQNGTVECGHTVSYYYVGKDATFGFDASMPFGAN HCCCCEEEEEEEECCCCCCHHHHHHHHHCCCEECCCEEEEEEECCCCCCCCCCCCCCCCC TRQQNSWLYHGGGMALMREFFAKYNMLNFPCGNTGTQMGGWFRKEIKTVEDLKGLKFRIG CCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEC GYAGKVLTKLGVVPQQIAGGDLYPALEKGTIDAAEWVGPYDDEKLGFNKVAPYYYYPGWW CHHHHHHHHHCCCHHHHCCCCCCCCHHCCCCCHHHHCCCCCCCCCCCCCCCCCEECCCCC EGGPCVSALVNKNEWEKLPKHYKAVFEAAAAEANLDMSAKYDVLNPPALKRLIANGTQLR CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCC PFSKDIMLACYKAAQETYAEECAANPAFKKVFDHWSAYLAEQRSWFSVAEAGFDNFMLYG CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE IPKK CCCC >Mature Secondary Structure MQRRKFLTGAAVGAAAASTTIAAPAIAQSMPEIKWRLASSFPKSLDTIYGAGEVLAKRVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHH EATDGKFQIRVFAGGEIVPGLQVLDAVQNGTVECGHTVSYYYVGKDATFGFDASMPFGAN HCCCCEEEEEEEECCCCCCHHHHHHHHHCCCEECCCEEEEEEECCCCCCCCCCCCCCCCC TRQQNSWLYHGGGMALMREFFAKYNMLNFPCGNTGTQMGGWFRKEIKTVEDLKGLKFRIG CCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEC GYAGKVLTKLGVVPQQIAGGDLYPALEKGTIDAAEWVGPYDDEKLGFNKVAPYYYYPGWW CHHHHHHHHHCCCHHHHCCCCCCCCHHCCCCCHHHHCCCCCCCCCCCCCCCCCEECCCCC EGGPCVSALVNKNEWEKLPKHYKAVFEAAAAEANLDMSAKYDVLNPPALKRLIANGTQLR CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCC PFSKDIMLACYKAAQETYAEECAANPAFKKVFDHWSAYLAEQRSWFSVAEAGFDNFMLYG CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE IPKK CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA