Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83311683

Identifier: 83311683

GI number: 83311683

Start: 2769089

End: 2770183

Strand: Reverse

Name: 83311683

Synonym: amb2584

Alternate gene names: NA

Gene position: 2770183-2769089 (Counterclockwise)

Preceding gene: 83311684

Following gene: 83311676

Centisome position: 55.77

GC content: 62.92

Gene sequence:

>1095_bases
ATGCAGCGACGTAAATTTCTGACTGGAGCGGCGGTAGGCGCCGCCGCCGCCTCGACGACCATCGCGGCCCCGGCCATCGC
GCAGAGCATGCCCGAGATCAAGTGGCGCCTGGCCTCCAGCTTCCCCAAGAGCCTGGATACCATCTATGGCGCCGGTGAGG
TTCTGGCCAAGCGGGTGGCCGAGGCCACCGACGGCAAGTTCCAGATCCGGGTCTTCGCCGGCGGCGAGATCGTGCCCGGT
CTGCAGGTCCTCGATGCCGTGCAGAACGGCACCGTCGAATGCGGCCACACCGTCAGCTACTACTATGTGGGCAAGGACGC
CACCTTTGGCTTCGACGCCTCCATGCCCTTCGGCGCCAATACCCGCCAGCAGAATTCCTGGTTGTACCATGGCGGCGGCA
TGGCGCTGATGCGCGAGTTCTTCGCCAAGTACAACATGCTGAACTTCCCCTGCGGCAATACCGGCACCCAGATGGGCGGC
TGGTTCCGCAAGGAGATCAAGACGGTCGAGGACCTCAAGGGCCTCAAGTTCCGTATCGGCGGCTATGCCGGCAAGGTGTT
GACCAAGCTGGGCGTGGTGCCGCAGCAGATCGCCGGCGGCGATCTCTATCCCGCCCTGGAAAAGGGCACCATCGATGCCG
CCGAATGGGTCGGCCCCTATGACGACGAGAAACTGGGATTCAACAAGGTGGCGCCCTACTACTACTACCCCGGCTGGTGG
GAAGGCGGCCCCTGCGTTTCGGCCCTGGTCAACAAGAACGAGTGGGAAAAGCTGCCCAAGCACTACAAGGCGGTGTTCGA
GGCGGCGGCGGCCGAGGCCAATCTGGACATGAGCGCCAAGTACGACGTGCTCAATCCGCCGGCCCTCAAGCGCCTGATCG
CCAACGGCACCCAGCTGCGTCCGTTCTCCAAGGACATCATGCTGGCCTGCTACAAGGCGGCTCAGGAGACTTATGCCGAG
GAATGCGCGGCTAATCCCGCCTTCAAGAAGGTCTTCGACCATTGGAGCGCCTATCTGGCCGAACAGCGTTCCTGGTTCAG
CGTCGCCGAGGCCGGCTTCGACAATTTCATGCTCTACGGCATTCCCAAGAAGTAA

Upstream 100 bases:

>100_bases
TCCGAAGTGGCCGGTCGCGTTGCGTCCCCCTTGCATTGGTGTAGGATAATTTCCACCTGATCCGGATCAACCGGCAAAAG
TTTTCTGGGAGGAGACTTTA

Downstream 100 bases:

>100_bases
TCCCGGGATGGCCTGAACGGGGAAAGCCCCGCACCGGAAGGTGCGGGGCTTTTTCATTGCGGCACGATTGCCTTACTTGC
TATCGGGGCCGCCATACATG

Product: TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Transporter DctP Subunit; Tat Pathway Signal Sequence Domain-Containing Protein; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; Trap-T Transport System Periplasmic Component; TRAP Dicarboxylate Transporter-DctP Subunit; C4-Dicarboxylate Transporter; TRAP Transporter; Tat Pathway Signal Sequence Domain-Containing; TRAP Dicarboxylate Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MQRRKFLTGAAVGAAAASTTIAAPAIAQSMPEIKWRLASSFPKSLDTIYGAGEVLAKRVAEATDGKFQIRVFAGGEIVPG
LQVLDAVQNGTVECGHTVSYYYVGKDATFGFDASMPFGANTRQQNSWLYHGGGMALMREFFAKYNMLNFPCGNTGTQMGG
WFRKEIKTVEDLKGLKFRIGGYAGKVLTKLGVVPQQIAGGDLYPALEKGTIDAAEWVGPYDDEKLGFNKVAPYYYYPGWW
EGGPCVSALVNKNEWEKLPKHYKAVFEAAAAEANLDMSAKYDVLNPPALKRLIANGTQLRPFSKDIMLACYKAAQETYAE
ECAANPAFKKVFDHWSAYLAEQRSWFSVAEAGFDNFMLYGIPKK

Sequences:

>Translated_364_residues
MQRRKFLTGAAVGAAAASTTIAAPAIAQSMPEIKWRLASSFPKSLDTIYGAGEVLAKRVAEATDGKFQIRVFAGGEIVPG
LQVLDAVQNGTVECGHTVSYYYVGKDATFGFDASMPFGANTRQQNSWLYHGGGMALMREFFAKYNMLNFPCGNTGTQMGG
WFRKEIKTVEDLKGLKFRIGGYAGKVLTKLGVVPQQIAGGDLYPALEKGTIDAAEWVGPYDDEKLGFNKVAPYYYYPGWW
EGGPCVSALVNKNEWEKLPKHYKAVFEAAAAEANLDMSAKYDVLNPPALKRLIANGTQLRPFSKDIMLACYKAAQETYAE
ECAANPAFKKVFDHWSAYLAEQRSWFSVAEAGFDNFMLYGIPKK
>Mature_364_residues
MQRRKFLTGAAVGAAAASTTIAAPAIAQSMPEIKWRLASSFPKSLDTIYGAGEVLAKRVAEATDGKFQIRVFAGGEIVPG
LQVLDAVQNGTVECGHTVSYYYVGKDATFGFDASMPFGANTRQQNSWLYHGGGMALMREFFAKYNMLNFPCGNTGTQMGG
WFRKEIKTVEDLKGLKFRIGGYAGKVLTKLGVVPQQIAGGDLYPALEKGTIDAAEWVGPYDDEKLGFNKVAPYYYYPGWW
EGGPCVSALVNKNEWEKLPKHYKAVFEAAAAEANLDMSAKYDVLNPPALKRLIANGTQLRPFSKDIMLACYKAAQETYAE
ECAANPAFKKVFDHWSAYLAEQRSWFSVAEAGFDNFMLYGIPKK

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39994; Mature: 39994

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRKFLTGAAVGAAAASTTIAAPAIAQSMPEIKWRLASSFPKSLDTIYGAGEVLAKRVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHH
EATDGKFQIRVFAGGEIVPGLQVLDAVQNGTVECGHTVSYYYVGKDATFGFDASMPFGAN
HCCCCEEEEEEEECCCCCCHHHHHHHHHCCCEECCCEEEEEEECCCCCCCCCCCCCCCCC
TRQQNSWLYHGGGMALMREFFAKYNMLNFPCGNTGTQMGGWFRKEIKTVEDLKGLKFRIG
CCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEC
GYAGKVLTKLGVVPQQIAGGDLYPALEKGTIDAAEWVGPYDDEKLGFNKVAPYYYYPGWW
CHHHHHHHHHCCCHHHHCCCCCCCCHHCCCCCHHHHCCCCCCCCCCCCCCCCCEECCCCC
EGGPCVSALVNKNEWEKLPKHYKAVFEAAAAEANLDMSAKYDVLNPPALKRLIANGTQLR
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCC
PFSKDIMLACYKAAQETYAEECAANPAFKKVFDHWSAYLAEQRSWFSVAEAGFDNFMLYG
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
IPKK
CCCC
>Mature Secondary Structure
MQRRKFLTGAAVGAAAASTTIAAPAIAQSMPEIKWRLASSFPKSLDTIYGAGEVLAKRVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHH
EATDGKFQIRVFAGGEIVPGLQVLDAVQNGTVECGHTVSYYYVGKDATFGFDASMPFGAN
HCCCCEEEEEEEECCCCCCHHHHHHHHHCCCEECCCEEEEEEECCCCCCCCCCCCCCCCC
TRQQNSWLYHGGGMALMREFFAKYNMLNFPCGNTGTQMGGWFRKEIKTVEDLKGLKFRIG
CCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEC
GYAGKVLTKLGVVPQQIAGGDLYPALEKGTIDAAEWVGPYDDEKLGFNKVAPYYYYPGWW
CHHHHHHHHHCCCHHHHCCCCCCCCHHCCCCCHHHHCCCCCCCCCCCCCCCCCEECCCCC
EGGPCVSALVNKNEWEKLPKHYKAVFEAAAAEANLDMSAKYDVLNPPALKRLIANGTQLR
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCC
PFSKDIMLACYKAAQETYAEECAANPAFKKVFDHWSAYLAEQRSWFSVAEAGFDNFMLYG
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
IPKK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA