| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is phoB [C]
Identifier: 83311634
GI number: 83311634
Start: 2717807
End: 2718655
Strand: Reverse
Name: phoB [C]
Synonym: amb2535
Alternate gene names: 83311634
Gene position: 2718655-2717807 (Counterclockwise)
Preceding gene: 83311635
Following gene: 83311633
Centisome position: 54.73
GC content: 65.61
Gene sequence:
>849_bases ATGGGGGTGACGTGGAGTGAGCGGATGAGCGTCGGCGTGCCGCTGCTCGATTCCGACCATAAAACCCTCATCGGCCTGAT CAATCACCTGCAGCGCTCCATCGGCGACGACGAGGAACACGCCTCGGTGGGCAGCGTGCTGCAGGCCCTGGAGGAGTATG CCGCTCATCACTTCGCCCGCGAGGAGGCGATGATGGACGTCTGCCGTTATCCCCTGCTGTCCCGGCATCACGGGACGCAT GCGGAGTTCACGAAGAAGGTCACGGACCTGAAGGGTCGTTACGACCTGGACCGGACCGGGGTGCGGGCCAGGGAATGCCT GGCCTTCCTGAACTCCTGGCTGATCGATCACATCTGCACCACCGACATGAACTACCGGTCGTGGGTGATCGGCCATCCGG GGGCGGAAGCGGCGGCCCAGCGCGTCACCTTGACCGGGGCGACGAAAAAAGGGGCCGAGGTGGACTGGACGCAACTGCGC GTCCTGCTGGTGGATGACAACGTCAATTTCCTGGAAATCCTGCGGACCATCCTGCTCAGCGTCGGCGTGACGCGGATCTC GGCCGCCCACGATCTGAATGCCGCCAAGGCGGTGATCAGTCACGAGCCTCTGGACCTGCTGCTCTGCGACTGGCACGTGG GCGACGATAGCGGCCTGGAATTGGTCCGCTGGGTGCGGCGTGGCCCGCCCGACCAGGCCCGTCTGCCGGTGGTGGTCCTG TCGGGGCACGAGCGCATGGCCAATCGCGATCTGGCCTTGCTGGCCGGGGCGGACGACTTCATGGAAAAGCCCATCTCGGC CCGTAACCTGTTGCTGGGCGTCGCCCGGCTGGCGAGGAAGGCGGCATGA
Upstream 100 bases:
>100_bases TGTCGGCGGCGCTTCGGGCCTATGCCGCCATGACCACCAGCGCGGCACGCGGAGCGGTGCGCGACGTCTCGCAACTGGAA CGCTGAGGAAGGACCGGCCG
Downstream 100 bases:
>100_bases GCGCTCTGGTCAACGCCGACGGCACGGTACCGGAGTCTGTCCACCCCCTGCCTGATCTGCTGCGGCTGTCCACCGATCAG CTTCTGGACTCGTTCATCGC
Product: hemerythrin; FOG: CheY-like receiver
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MGVTWSERMSVGVPLLDSDHKTLIGLINHLQRSIGDDEEHASVGSVLQALEEYAAHHFAREEAMMDVCRYPLLSRHHGTH AEFTKKVTDLKGRYDLDRTGVRARECLAFLNSWLIDHICTTDMNYRSWVIGHPGAEAAAQRVTLTGATKKGAEVDWTQLR VLLVDDNVNFLEILRTILLSVGVTRISAAHDLNAAKAVISHEPLDLLLCDWHVGDDSGLELVRWVRRGPPDQARLPVVVL SGHERMANRDLALLAGADDFMEKPISARNLLLGVARLARKAA
Sequences:
>Translated_282_residues MGVTWSERMSVGVPLLDSDHKTLIGLINHLQRSIGDDEEHASVGSVLQALEEYAAHHFAREEAMMDVCRYPLLSRHHGTH AEFTKKVTDLKGRYDLDRTGVRARECLAFLNSWLIDHICTTDMNYRSWVIGHPGAEAAAQRVTLTGATKKGAEVDWTQLR VLLVDDNVNFLEILRTILLSVGVTRISAAHDLNAAKAVISHEPLDLLLCDWHVGDDSGLELVRWVRRGPPDQARLPVVVL SGHERMANRDLALLAGADDFMEKPISARNLLLGVARLARKAA >Mature_281_residues GVTWSERMSVGVPLLDSDHKTLIGLINHLQRSIGDDEEHASVGSVLQALEEYAAHHFAREEAMMDVCRYPLLSRHHGTHA EFTKKVTDLKGRYDLDRTGVRARECLAFLNSWLIDHICTTDMNYRSWVIGHPGAEAAAQRVTLTGATKKGAEVDWTQLRV LLVDDNVNFLEILRTILLSVGVTRISAAHDLNAAKAVISHEPLDLLLCDWHVGDDSGLELVRWVRRGPPDQARLPVVVLS GHERMANRDLALLAGADDFMEKPISARNLLLGVARLARKAA
Specific function: Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemerythrin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012827 - InterPro: IPR012312 - InterPro: IPR016131 [H]
Pfam domain/function: PF01814 Hemerythrin [H]
EC number: NA
Molecular weight: Translated: 31311; Mature: 31180
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00550 HEMERYTHRINS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVTWSERMSVGVPLLDSDHKTLIGLINHLQRSIGDDEEHASVGSVLQALEEYAAHHFAR CCCCCHHHHHCCCCEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH EEAMMDVCRYPLLSRHHGTHAEFTKKVTDLKGRYDLDRTGVRARECLAFLNSWLIDHICT HHHHHHHHHCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC TDMNYRSWVIGHPGAEAAAQRVTLTGATKKGAEVDWTQLRVLLVDDNVNFLEILRTILLS CCCCCCEEEEECCCHHHHHHEEEEECCCCCCCCCCHHHEEEEEEECCCCHHHHHHHHHHH VGVTRISAAHDLNAAKAVISHEPLDLLLCDWHVGDDSGLELVRWVRRGPPDQARLPVVVL HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEE SGHERMANRDLALLAGADDFMEKPISARNLLLGVARLARKAA CCCHHHHCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure GVTWSERMSVGVPLLDSDHKTLIGLINHLQRSIGDDEEHASVGSVLQALEEYAAHHFAR CCCCHHHHHCCCCEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH EEAMMDVCRYPLLSRHHGTHAEFTKKVTDLKGRYDLDRTGVRARECLAFLNSWLIDHICT HHHHHHHHHCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC TDMNYRSWVIGHPGAEAAAQRVTLTGATKKGAEVDWTQLRVLLVDDNVNFLEILRTILLS CCCCCCEEEEECCCHHHHHHEEEEECCCCCCCCCCHHHEEEEEEECCCCHHHHHHHHHHH VGVTRISAAHDLNAAKAVISHEPLDLLLCDWHVGDDSGLELVRWVRRGPPDQARLPVVVL HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEE SGHERMANRDLALLAGADDFMEKPISARNLLLGVARLARKAA CCCHHHHCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA