Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is phoB [C]

Identifier: 83311634

GI number: 83311634

Start: 2717807

End: 2718655

Strand: Reverse

Name: phoB [C]

Synonym: amb2535

Alternate gene names: 83311634

Gene position: 2718655-2717807 (Counterclockwise)

Preceding gene: 83311635

Following gene: 83311633

Centisome position: 54.73

GC content: 65.61

Gene sequence:

>849_bases
ATGGGGGTGACGTGGAGTGAGCGGATGAGCGTCGGCGTGCCGCTGCTCGATTCCGACCATAAAACCCTCATCGGCCTGAT
CAATCACCTGCAGCGCTCCATCGGCGACGACGAGGAACACGCCTCGGTGGGCAGCGTGCTGCAGGCCCTGGAGGAGTATG
CCGCTCATCACTTCGCCCGCGAGGAGGCGATGATGGACGTCTGCCGTTATCCCCTGCTGTCCCGGCATCACGGGACGCAT
GCGGAGTTCACGAAGAAGGTCACGGACCTGAAGGGTCGTTACGACCTGGACCGGACCGGGGTGCGGGCCAGGGAATGCCT
GGCCTTCCTGAACTCCTGGCTGATCGATCACATCTGCACCACCGACATGAACTACCGGTCGTGGGTGATCGGCCATCCGG
GGGCGGAAGCGGCGGCCCAGCGCGTCACCTTGACCGGGGCGACGAAAAAAGGGGCCGAGGTGGACTGGACGCAACTGCGC
GTCCTGCTGGTGGATGACAACGTCAATTTCCTGGAAATCCTGCGGACCATCCTGCTCAGCGTCGGCGTGACGCGGATCTC
GGCCGCCCACGATCTGAATGCCGCCAAGGCGGTGATCAGTCACGAGCCTCTGGACCTGCTGCTCTGCGACTGGCACGTGG
GCGACGATAGCGGCCTGGAATTGGTCCGCTGGGTGCGGCGTGGCCCGCCCGACCAGGCCCGTCTGCCGGTGGTGGTCCTG
TCGGGGCACGAGCGCATGGCCAATCGCGATCTGGCCTTGCTGGCCGGGGCGGACGACTTCATGGAAAAGCCCATCTCGGC
CCGTAACCTGTTGCTGGGCGTCGCCCGGCTGGCGAGGAAGGCGGCATGA

Upstream 100 bases:

>100_bases
TGTCGGCGGCGCTTCGGGCCTATGCCGCCATGACCACCAGCGCGGCACGCGGAGCGGTGCGCGACGTCTCGCAACTGGAA
CGCTGAGGAAGGACCGGCCG

Downstream 100 bases:

>100_bases
GCGCTCTGGTCAACGCCGACGGCACGGTACCGGAGTCTGTCCACCCCCTGCCTGATCTGCTGCGGCTGTCCACCGATCAG
CTTCTGGACTCGTTCATCGC

Product: hemerythrin; FOG: CheY-like receiver

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MGVTWSERMSVGVPLLDSDHKTLIGLINHLQRSIGDDEEHASVGSVLQALEEYAAHHFAREEAMMDVCRYPLLSRHHGTH
AEFTKKVTDLKGRYDLDRTGVRARECLAFLNSWLIDHICTTDMNYRSWVIGHPGAEAAAQRVTLTGATKKGAEVDWTQLR
VLLVDDNVNFLEILRTILLSVGVTRISAAHDLNAAKAVISHEPLDLLLCDWHVGDDSGLELVRWVRRGPPDQARLPVVVL
SGHERMANRDLALLAGADDFMEKPISARNLLLGVARLARKAA

Sequences:

>Translated_282_residues
MGVTWSERMSVGVPLLDSDHKTLIGLINHLQRSIGDDEEHASVGSVLQALEEYAAHHFAREEAMMDVCRYPLLSRHHGTH
AEFTKKVTDLKGRYDLDRTGVRARECLAFLNSWLIDHICTTDMNYRSWVIGHPGAEAAAQRVTLTGATKKGAEVDWTQLR
VLLVDDNVNFLEILRTILLSVGVTRISAAHDLNAAKAVISHEPLDLLLCDWHVGDDSGLELVRWVRRGPPDQARLPVVVL
SGHERMANRDLALLAGADDFMEKPISARNLLLGVARLARKAA
>Mature_281_residues
GVTWSERMSVGVPLLDSDHKTLIGLINHLQRSIGDDEEHASVGSVLQALEEYAAHHFAREEAMMDVCRYPLLSRHHGTHA
EFTKKVTDLKGRYDLDRTGVRARECLAFLNSWLIDHICTTDMNYRSWVIGHPGAEAAAQRVTLTGATKKGAEVDWTQLRV
LLVDDNVNFLEILRTILLSVGVTRISAAHDLNAAKAVISHEPLDLLLCDWHVGDDSGLELVRWVRRGPPDQARLPVVVLS
GHERMANRDLALLAGADDFMEKPISARNLLLGVARLARKAA

Specific function: Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hemerythrin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012827
- InterPro:   IPR012312
- InterPro:   IPR016131 [H]

Pfam domain/function: PF01814 Hemerythrin [H]

EC number: NA

Molecular weight: Translated: 31311; Mature: 31180

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00550 HEMERYTHRINS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVTWSERMSVGVPLLDSDHKTLIGLINHLQRSIGDDEEHASVGSVLQALEEYAAHHFAR
CCCCCHHHHHCCCCEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
EEAMMDVCRYPLLSRHHGTHAEFTKKVTDLKGRYDLDRTGVRARECLAFLNSWLIDHICT
HHHHHHHHHCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
TDMNYRSWVIGHPGAEAAAQRVTLTGATKKGAEVDWTQLRVLLVDDNVNFLEILRTILLS
CCCCCCEEEEECCCHHHHHHEEEEECCCCCCCCCCHHHEEEEEEECCCCHHHHHHHHHHH
VGVTRISAAHDLNAAKAVISHEPLDLLLCDWHVGDDSGLELVRWVRRGPPDQARLPVVVL
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEE
SGHERMANRDLALLAGADDFMEKPISARNLLLGVARLARKAA
CCCHHHHCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GVTWSERMSVGVPLLDSDHKTLIGLINHLQRSIGDDEEHASVGSVLQALEEYAAHHFAR
CCCCHHHHHCCCCEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
EEAMMDVCRYPLLSRHHGTHAEFTKKVTDLKGRYDLDRTGVRARECLAFLNSWLIDHICT
HHHHHHHHHCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
TDMNYRSWVIGHPGAEAAAQRVTLTGATKKGAEVDWTQLRVLLVDDNVNFLEILRTILLS
CCCCCCEEEEECCCHHHHHHEEEEECCCCCCCCCCHHHEEEEEEECCCCHHHHHHHHHHH
VGVTRISAAHDLNAAKAVISHEPLDLLLCDWHVGDDSGLELVRWVRRGPPDQARLPVVVL
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEE
SGHERMANRDLALLAGADDFMEKPISARNLLLGVARLARKAA
CCCHHHHCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA