Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83311633

Identifier: 83311633

GI number: 83311633

Start: 2716680

End: 2717810

Strand: Reverse

Name: 83311633

Synonym: amb2534

Alternate gene names: NA

Gene position: 2717810-2716680 (Counterclockwise)

Preceding gene: 83311634

Following gene: 83311629

Centisome position: 54.72

GC content: 66.22

Gene sequence:

>1131_bases
ATGAGCGCTCTGGTCAACGCCGACGGCACGGTACCGGAGTCTGTCCACCCCCTGCCTGATCTGCTGCGGCTGTCCACCGA
TCAGCTTCTGGACTCGTTCATCGCCAGCCAGCGCCGGGATTTTACCCGGGTCATCGAGCAGGTGGCCGAGCCGGGATCGG
CCCTGAACGGCATCTTCCGCGAACTGGGAGCCGATGCGGCGCGGCTGGGCGAGATGTTTCTCGAACTGCACACCCATGTG
ATGGATCACCCGGTGTGGCGCCATCCGTTCTTTCGCCGGGTGTTCGAGGGGCGGATCACGCCGCCCCAGGTCACGGCCTT
CGCCCTGCAGTACTTCAATCAGATCAAGAACACCCGCCAGTGCGTCGCCCTGGCCATCGGCCGCTTTCACGGGCTGGCGG
CCACGGCGCGGGGCAGCCTGGGCGAGCGCCGCTCCGAGCTGACCCAGATCGCCCTGGCTCAATTGGTGGCCGACGAATAT
GGCGTGGGCAGCCACGGCCTGGACGATTACCCCGAACTGGGCCGCCTGCTGGCCGCCAAGACCCATATCGTCATGTACCG
GCAGGTGTTCGACGGCCTGGGCGTCGGGCCTGGTGACCAGGACATCCCCATGCTGCCCCAGGTGGCCGACAACGTGCTGA
TCCAGCGGCTGGTGGCCGGTCATCCGGCCTTCAGCCCGCTGGAAGCCCTGGCCTCGGTGGGGCTGGGCATGGAATGGGGC
GTGCCGGAATTCTTCAGCCTGCTGCTGGGCGGCCTGATCAAGGTGTCCGAGCGCGAAGGGCTGGGCCTTACTCCCCACCA
TCTGCAAGTGTTCATCGCCCATGTGCGCTATGACGTGTTGCACGCCATCTCGGTGATGCTGGTGACGGCGCTGCACATGG
AGGAGGCGAGGGACCTGGAGGTGGTCAAGGGCGCCTGCAACATGCTGATGAGCGGCCGCTTCGCCATGATGAGCGGGCTT
TACGCCCATGTGTTCGGCGAGACCTGCCCCGTGGCGGCGTTTGAACCCCGGCACCGCGTTACCGACCCCCGCATCGGAGA
GGCGCTGATCGAAGCGCGGCAAGACATCGATCCCGCCCAGGTGGTGGGAGGCGAGGATTATCGCCGCAGCCTGACGACAC
CGTTCGGTTAA

Upstream 100 bases:

>100_bases
GCGATCTGGCCTTGCTGGCCGGGGCGGACGACTTCATGGAAAAGCCCATCTCGGCCCGTAACCTGTTGCTGGGCGTCGCC
CGGCTGGCGAGGAAGGCGGC

Downstream 100 bases:

>100_bases
TCCCCGCTTCGCGGCAAGGCGACCGCCCTGACCCGTTCGAAGGCACAGCCTCCGAACCTCCAGTTTTTAAACGCTGAAGG
GTCCGGGAAGCTGTGCTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MSALVNADGTVPESVHPLPDLLRLSTDQLLDSFIASQRRDFTRVIEQVAEPGSALNGIFRELGADAARLGEMFLELHTHV
MDHPVWRHPFFRRVFEGRITPPQVTAFALQYFNQIKNTRQCVALAIGRFHGLAATARGSLGERRSELTQIALAQLVADEY
GVGSHGLDDYPELGRLLAAKTHIVMYRQVFDGLGVGPGDQDIPMLPQVADNVLIQRLVAGHPAFSPLEALASVGLGMEWG
VPEFFSLLLGGLIKVSEREGLGLTPHHLQVFIAHVRYDVLHAISVMLVTALHMEEARDLEVVKGACNMLMSGRFAMMSGL
YAHVFGETCPVAAFEPRHRVTDPRIGEALIEARQDIDPAQVVGGEDYRRSLTTPFG

Sequences:

>Translated_376_residues
MSALVNADGTVPESVHPLPDLLRLSTDQLLDSFIASQRRDFTRVIEQVAEPGSALNGIFRELGADAARLGEMFLELHTHV
MDHPVWRHPFFRRVFEGRITPPQVTAFALQYFNQIKNTRQCVALAIGRFHGLAATARGSLGERRSELTQIALAQLVADEY
GVGSHGLDDYPELGRLLAAKTHIVMYRQVFDGLGVGPGDQDIPMLPQVADNVLIQRLVAGHPAFSPLEALASVGLGMEWG
VPEFFSLLLGGLIKVSEREGLGLTPHHLQVFIAHVRYDVLHAISVMLVTALHMEEARDLEVVKGACNMLMSGRFAMMSGL
YAHVFGETCPVAAFEPRHRVTDPRIGEALIEARQDIDPAQVVGGEDYRRSLTTPFG
>Mature_375_residues
SALVNADGTVPESVHPLPDLLRLSTDQLLDSFIASQRRDFTRVIEQVAEPGSALNGIFRELGADAARLGEMFLELHTHVM
DHPVWRHPFFRRVFEGRITPPQVTAFALQYFNQIKNTRQCVALAIGRFHGLAATARGSLGERRSELTQIALAQLVADEYG
VGSHGLDDYPELGRLLAAKTHIVMYRQVFDGLGVGPGDQDIPMLPQVADNVLIQRLVAGHPAFSPLEALASVGLGMEWGV
PEFFSLLLGGLIKVSEREGLGLTPHHLQVFIAHVRYDVLHAISVMLVTALHMEEARDLEVVKGACNMLMSGRFAMMSGLY
AHVFGETCPVAAFEPRHRVTDPRIGEALIEARQDIDPAQVVGGEDYRRSLTTPFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41310; Mature: 41179

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCHHHHHCCCCCCC
>Mature Secondary Structure 
SALVNADGTVPESVHPLPDLLRLSTDQLLDSFIASQRRDFTRVIEQVAEPGSALNGIFR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ELGADAARLGEMFLELHTHVMDHPVWRHPFFRRVFEGRITPPQVTAFALQYFNQIKNTRQ
HHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
CVALAIGRFHGLAATARGSLGERRSELTQIALAQLVADEYGVGSHGLDDYPELGRLLAAK
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
THIVMYRQVFDGLGVGPGDQDIPMLPQVADNVLIQRLVAGHPAFSPLEALASVGLGMEWG
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
VPEFFSLLLGGLIKVSEREGLGLTPHHLQVFIAHVRYDVLHAISVMLVTALHMEEARDLE
CHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVKGACNMLMSGRFAMMSGLYAHVFGETCPVAAFEPRHRVTDPRIGEALIEARQDIDPAQ
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH
VVGGEDYRRSLTTPFG
HCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA