| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is lpxA [H]
Identifier: 83311585
GI number: 83311585
Start: 2663609
End: 2664400
Strand: Reverse
Name: lpxA [H]
Synonym: amb2486
Alternate gene names: 83311585
Gene position: 2664400-2663609 (Counterclockwise)
Preceding gene: 83311586
Following gene: 83311584
Centisome position: 53.64
GC content: 62.88
Gene sequence:
>792_bases ATGACCAATATTCACCCTTCGGCCGTTATCGATTCCAAGGCGGAGATCGCCTCTTCGGCGATCATCGGGCCTTTCTGCGT GGTTGGACCCGACGTCAAGTTGGGCGAATCCGTTGAACTGGTGTCCCATGTGGCGGTGGCCGGACGCACCACCATCGGCG CCGGCACCCGTATTTTCCCGTTCGCCTCCATCGGTCACCGTCCTCAGGACCTCAAGTACAAGGGCGAGCCCTCCACCTTG GAGATCGGGGCCAACAACCAGATCCGCGAGCATGTCACCATGAATCCCGGCACCGAGGGTGGCGGCATGGTGACCAGGGT CGGCGACAATTGCCTGTTCATGGCCAGCGCCCACGTGGCCCATGACTGCATCCTGGGCGACAATGTCATCATGGCCAACA ACGCCACCCTGGCGGGTCATGTGACGGTCGGCGAATACGCCTTCCTGGGCGGGCTGTCGGCGGTGCACCAGTTCGTGCGC ATCGGTCGCCACGCCATGATCGGCGGCATGTCGGGCGTCGAGGCGGACGTCATTCCCTTCGGCATGGTGATCGGTAACCG GGCCTATCTCAATGGGCTGAACATCGTCGGCCTGAAGCGTCGGGGCTTTTCCCGCGACGACATCCACACGCTGCGCAATG CCTACCGTCTGATGTTCGCGCCGGAAGGCACGCTGGCCGAGCGCCTCTCCGACGTGGAGGAGCAGTTCAAGGACCATCCG GTGGTGATGGAGATCGTGGCCTTCATCCGCTCGGATTCGTCGCGTTCGCTCAGCACGCCGAATGGCTCCTAA
Upstream 100 bases:
>100_bases AACGCTCGCGCGGGAACGTCTGGAAGTTCCGTGGCGAAGCCAAGGTCGATGGCGTCCTTGTCGCCGAAGCCACCTACGCC GCCATGATTCTGGACGAGAA
Downstream 100 bases:
>100_bases GCTCGGCATCATTGCCGGCGGCGGCGACCTGCCGGGACTGGTCGCCGCCGCCTGCCGTGCCCAAGGGCGCCCCTTTCATA TTCTCGCCCTTTCGGGCCAT
Product: UDP-N-acetylglucosamine acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTNIHPSAVIDSKAEIASSAIIGPFCVVGPDVKLGESVELVSHVAVAGRTTIGAGTRIFPFASIGHRPQDLKYKGEPSTL EIGANNQIREHVTMNPGTEGGGMVTRVGDNCLFMASAHVAHDCILGDNVIMANNATLAGHVTVGEYAFLGGLSAVHQFVR IGRHAMIGGMSGVEADVIPFGMVIGNRAYLNGLNIVGLKRRGFSRDDIHTLRNAYRLMFAPEGTLAERLSDVEEQFKDHP VVMEIVAFIRSDSSRSLSTPNGS
Sequences:
>Translated_263_residues MTNIHPSAVIDSKAEIASSAIIGPFCVVGPDVKLGESVELVSHVAVAGRTTIGAGTRIFPFASIGHRPQDLKYKGEPSTL EIGANNQIREHVTMNPGTEGGGMVTRVGDNCLFMASAHVAHDCILGDNVIMANNATLAGHVTVGEYAFLGGLSAVHQFVR IGRHAMIGGMSGVEADVIPFGMVIGNRAYLNGLNIVGLKRRGFSRDDIHTLRNAYRLMFAPEGTLAERLSDVEEQFKDHP VVMEIVAFIRSDSSRSLSTPNGS >Mature_262_residues TNIHPSAVIDSKAEIASSAIIGPFCVVGPDVKLGESVELVSHVAVAGRTTIGAGTRIFPFASIGHRPQDLKYKGEPSTLE IGANNQIREHVTMNPGTEGGGMVTRVGDNCLFMASAHVAHDCILGDNVIMANNATLAGHVTVGEYAFLGGLSAVHQFVRI GRHAMIGGMSGVEADVIPFGMVIGNRAYLNGLNIVGLKRRGFSRDDIHTLRNAYRLMFAPEGTLAERLSDVEEQFKDHPV VMEIVAFIRSDSSRSLSTPNGS
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell [H]
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786378, Length=254, Percent_Identity=50.3937007874016, Blast_Score=249, Evalue=1e-67, Organism=Escherichia coli, GI1786376, Length=190, Percent_Identity=26.3157894736842, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR010137 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.129 [H]
Molecular weight: Translated: 27992; Mature: 27861
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNIHPSAVIDSKAEIASSAIIGPFCVVGPDVKLGESVELVSHVAVAGRTTIGAGTRIFP CCCCCCCCEECCHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCEECCCCEEEE FASIGHRPQDLKYKGEPSTLEIGANNQIREHVTMNPGTEGGGMVTRVGDNCLFMASAHVA EHHCCCCCCCCEECCCCCEEEECCCCCEEHEEEECCCCCCCCEEEEECCCEEEEEEHHHH HDCILGDNVIMANNATLAGHVTVGEYAFLGGLSAVHQFVRIGRHAMIGGMSGVEADVIPF HHEEECCCEEEECCCEEEEEEEECHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCEEE GMVIGNRAYLNGLNIVGLKRRGFSRDDIHTLRNAYRLMFAPEGTLAERLSDVEEQFKDHP HHHCCCCHHCCCCEEEEEECCCCCHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCC VVMEIVAFIRSDSSRSLSTPNGS HHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TNIHPSAVIDSKAEIASSAIIGPFCVVGPDVKLGESVELVSHVAVAGRTTIGAGTRIFP CCCCCCCEECCHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCEECCCCEEEE FASIGHRPQDLKYKGEPSTLEIGANNQIREHVTMNPGTEGGGMVTRVGDNCLFMASAHVA EHHCCCCCCCCEECCCCCEEEECCCCCEEHEEEECCCCCCCCEEEEECCCEEEEEEHHHH HDCILGDNVIMANNATLAGHVTVGEYAFLGGLSAVHQFVRIGRHAMIGGMSGVEADVIPF HHEEECCCEEEECCCEEEEEEEECHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCEEE GMVIGNRAYLNGLNIVGLKRRGFSRDDIHTLRNAYRLMFAPEGTLAERLSDVEEQFKDHP HHHCCCCHHCCCCEEEEEECCCCCHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCC VVMEIVAFIRSDSSRSLSTPNGS HHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA