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The map label for this gene is rlpA [H]

Identifier: 83311551

GI number: 83311551

Start: 2628459

End: 2629433

Strand: Reverse

Name: rlpA [H]

Synonym: amb2452

Alternate gene names: 83311551

Gene position: 2629433-2628459 (Counterclockwise)

Preceding gene: 83311552

Following gene: 83311550

Centisome position: 52.94

GC content: 66.97

Gene sequence:

>975_bases
ATGTCGCGGAGGACGCGCTTGGCGGCTTTGCTGCTGTCTGGGACCGTGCTGACGGGCTGCGCCGAGATGAACCTGTTCGG
GCATCTGGCCAAGAGCGCGGTGGGCGGGGACGAGCCTCCGCCGCCTTCGGCCTCGGCATCGACCAACTACAAGGTGGGCA
AGCCCTATCAGGTGGCCGGCGTCTGGTACTATCCCCAGGAAGATTTCGCCTATGACGAGACCGGCATCGCCTCCTGGTAC
GGCCCCAATTTTCACGCCAAGCTGACCGCCAACGGCGAAACCTTCGACCAGAACGCCGTCACCGCCGCCCACAAGACGCT
GCAGATGCCGTCGGTGGCCCGGGTGACCAATCTGGAGAACGGGCGCTCGATCATCGTGCGCATCAATGATCGCGGCCCCT
TCGTCAATGGCCGCATTCTCGACCTGTCGCGCCGCTCGGCCCAGTTGCTGGGCATGGAGGGCAGGGGCACCGCCAAGGTG
CGGGTGCAGATCCTGCCTGAGGAAAGCCGCGTGCTGGCCGGCAAGCTCAAGCCCGACAATGCCGGCAACGAGCCCAAGGT
GGCCAGCGCCGCCCCACGCGGCTCGGTCTCGGCGGAATCCCTGCCGCCGCCTCCCGGCGTCAAGAACAACGGCGGCGACA
ATGTCACCATTGCCTCGTCGGTCCAGCCGAAGCGCTCGGGCATGACGCCGGAATCCGTCGAACGCGAGGTGGCCGCCCAG
GAGGTGAAATCCGTCCCGGTGCGCCCCACCTCCATCTATGTCCAGGCCGGGTCCTACGGCCGCCACGACAATGCCAACCG
CATGGTGGCGCGCCTGTCCAAGGTGGGCAAGGCGCAGCTGCAGCAGGTGCATGTGCAGGGCAAGACCCTGTTCCGGGTCC
GGTTGGGACCCATGACCAGCGTCGAGGAGGCCGACCGCGTCCTCGATTCCGTGGTCGCCACGGGGGCGGAAGACGCCCGC
GTGGTTGTTGATTAA

Upstream 100 bases:

>100_bases
CGCTCCACCTTCTTCGCCTTGGCGGCGGGGCATCTTGCGGACCGCATCGGTGGCAAGTAGACTACAACATCTTTGGGCAA
GCAGGCGGGGAGGGGACTAG

Downstream 100 bases:

>100_bases
CAAAGAAAAGGCGCCGTGATGCTCGCTCTCTTCCGCCGTTCCCTGGCCGCGGCCCTGGCCGTTCCCCTGATGGCCCTTTC
GGCCACGGCCGGGGCTCAAT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSRRTRLAALLLSGTVLTGCAEMNLFGHLAKSAVGGDEPPPPSASASTNYKVGKPYQVAGVWYYPQEDFAYDETGIASWY
GPNFHAKLTANGETFDQNAVTAAHKTLQMPSVARVTNLENGRSIIVRINDRGPFVNGRILDLSRRSAQLLGMEGRGTAKV
RVQILPEESRVLAGKLKPDNAGNEPKVASAAPRGSVSAESLPPPPGVKNNGGDNVTIASSVQPKRSGMTPESVEREVAAQ
EVKSVPVRPTSIYVQAGSYGRHDNANRMVARLSKVGKAQLQQVHVQGKTLFRVRLGPMTSVEEADRVLDSVVATGAEDAR
VVVD

Sequences:

>Translated_324_residues
MSRRTRLAALLLSGTVLTGCAEMNLFGHLAKSAVGGDEPPPPSASASTNYKVGKPYQVAGVWYYPQEDFAYDETGIASWY
GPNFHAKLTANGETFDQNAVTAAHKTLQMPSVARVTNLENGRSIIVRINDRGPFVNGRILDLSRRSAQLLGMEGRGTAKV
RVQILPEESRVLAGKLKPDNAGNEPKVASAAPRGSVSAESLPPPPGVKNNGGDNVTIASSVQPKRSGMTPESVEREVAAQ
EVKSVPVRPTSIYVQAGSYGRHDNANRMVARLSKVGKAQLQQVHVQGKTLFRVRLGPMTSVEEADRVLDSVVATGAEDAR
VVVD
>Mature_323_residues
SRRTRLAALLLSGTVLTGCAEMNLFGHLAKSAVGGDEPPPPSASASTNYKVGKPYQVAGVWYYPQEDFAYDETGIASWYG
PNFHAKLTANGETFDQNAVTAAHKTLQMPSVARVTNLENGRSIIVRINDRGPFVNGRILDLSRRSAQLLGMEGRGTAKVR
VQILPEESRVLAGKLKPDNAGNEPKVASAAPRGSVSAESLPPPPGVKNNGGDNVTIASSVQPKRSGMTPESVEREVAAQE
VKSVPVRPTSIYVQAGSYGRHDNANRMVARLSKVGKAQLQQVHVQGKTLFRVRLGPMTSVEEADRVLDSVVATGAEDARV
VVD

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=123, Percent_Identity=43.0894308943089, Blast_Score=95, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009009
- InterPro:   IPR012997
- InterPro:   IPR007730 [H]

Pfam domain/function: PF03330 DPBB_1; PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 34608; Mature: 34476

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRTRLAALLLSGTVLTGCAEMNLFGHLAKSAVGGDEPPPPSASASTNYKVGKPYQVAG
CCCHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEE
VWYYPQEDFAYDETGIASWYGPNFHAKLTANGETFDQNAVTAAHKTLQMPSVARVTNLEN
EEECCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHCCCC
GRSIIVRINDRGPFVNGRILDLSRRSAQLLGMEGRGTAKVRVQILPEESRVLAGKLKPDN
CCEEEEEECCCCCEECCEEEECCCCCHHEEECCCCCCEEEEEEEECCCCEEEEEECCCCC
AGNEPKVASAAPRGSVSAESLPPPPGVKNNGGDNVTIASSVQPKRSGMTPESVEREVAAQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHH
EVKSVPVRPTSIYVQAGSYGRHDNANRMVARLSKVGKAQLQQVHVQGKTLFRVRLGPMTS
HHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCC
VEEADRVLDSVVATGAEDARVVVD
HHHHHHHHHHHHHCCCCCCEEEEC
>Mature Secondary Structure 
SRRTRLAALLLSGTVLTGCAEMNLFGHLAKSAVGGDEPPPPSASASTNYKVGKPYQVAG
CCHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEE
VWYYPQEDFAYDETGIASWYGPNFHAKLTANGETFDQNAVTAAHKTLQMPSVARVTNLEN
EEECCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHCCCC
GRSIIVRINDRGPFVNGRILDLSRRSAQLLGMEGRGTAKVRVQILPEESRVLAGKLKPDN
CCEEEEEECCCCCEECCEEEECCCCCHHEEECCCCCCEEEEEEEECCCCEEEEEECCCCC
AGNEPKVASAAPRGSVSAESLPPPPGVKNNGGDNVTIASSVQPKRSGMTPESVEREVAAQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHH
EVKSVPVRPTSIYVQAGSYGRHDNANRMVARLSKVGKAQLQQVHVQGKTLFRVRLGPMTS
HHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCC
VEEADRVLDSVVATGAEDARVVVD
HHHHHHHHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]