| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is cusC [H]
Identifier: 83311414
GI number: 83311414
Start: 2516994
End: 2518844
Strand: Reverse
Name: cusC [H]
Synonym: amb2315
Alternate gene names: 83311414
Gene position: 2518844-2516994 (Counterclockwise)
Preceding gene: 83311423
Following gene: 83311413
Centisome position: 50.71
GC content: 67.15
Gene sequence:
>1851_bases ATGGGCACCAGGGAAAGACCGGGCGTATCGGCCCTTGCGGCGCGGTGGGTCATGATTGCCGCGCTGTTGATGGGTAACAC CGCCTGCAACATGACGCCGACCTATGAGCGCCCGAAGCAGGAGCTTCCCACCAGCTACCGCAATCCGCTGCCCGAGCCCT CTCCCGAGATGCCCAAGCCCCTGTCCCAGTGGTGGACCATCTTCGGCTCGGAGGAGCTGAACACCCTGGTGGCTGAAGCC CTGGCCAACAACCACGATCTCAAGGCCGCCACCGCCCGCATCCTCCAGGCCGAAGCCCAGGCAGGATCGGCGGCCTCCTC CTTGCTGCCCACCATCACCGCATCCGGCAAGCGCAGCATCGACTCGCCGCAGGGTGGACAGGGGTCAGATCCCAGCCCCC CCACCAACCGCAGTCACCGCCTGAGCTCGGCCTATGTCTCGGCCAGTTGGGAAGTCGACCTGTGGGGCAAGATCCGGGCG TCGGAAGCCTCGTCCCTGGCCAGCGCCTTCGCCAATGTCCACGACCGCGAGGCGGTGGGCCTGACCCTGATCTCCGACGT GGTCCTGACCTATATCCAGTATCTGGAAGGTCTCGACCGCGAGACCGTGGCGCGCAGCAACATCGCCAACATGAAGGCCA TGTACAAGGCGGTGACCGAGCGTGTCCGCCTGGGCGAAAGCTCCAACCTGGAACTGGCGCAGCAGCGCAACGTCCTGGCC CAGACCGAGGCGACCATCCCGCCCATCGTTCTCCAGCGCGAGCGCGCCTTCAACAAGCTGGCGGTGCTGCTGGGGCGCCC GCCGCAGACTCTGGCCCTCAACGGTAAGACCCTGCGCGACCTGCTGGTCCCCGAAATGTCGGTGGGACTGCCTACCGACC TGCTGTTGCGCCGCCCGGACATCCGCAAGGCCGAGGCCAATCTGATCGCCGCCAATGCGAATATCGGCGTGGCGCGGGCC AAGCTGTTCCCGACCCTGTCCATCTCGGGCGATTGCGGCTGGGCGGCCCAGTATTTCGACAACATCACCAATCCCACCAG CATCTTCTTCACCATGGCTGGCACCCTGGCCGCCACCATCTTCGACAACGGCAAGACCCGCTCGGACATCGAGTACAGCG AGTCCCGCTACGCGGAACTGGTTGAGACCTATCAGCAGACCATCCTGACCAGCTTGCGCGACGTCGAGGACTCGCTGATG GCAGTCCGCCTGCAGGGCGACCTTGAAGTGGCGCAGCAGGAAGTGCTGCAGGCCTCCCTGGACGCCTATGGTCTCAGTTC AGAAGCCTTCCGGCTTGGCATGGTCGACTATCTGAACGTGCTGGAAACCCAACGCACCCGCTTTCAGGCGGAAGATGCCA AGGTCCAGGCCCGGTTCGGCCGGCTTGAAGCCGCCATCGGCCTTTACAAGGCCTTGGGAGGCGGCATGGAGCTGGATGAC GGGGCCGTGCCGCCGACACCACCGGCAGCGCCGGCACCGACCGGCGCACCGGCTCCGGACAAGTCAGCCCCCATGGCCCC GGTTGCCGCTCCGGCTCCAGCCCTTGCTCCTGCTGCCGTAGAGGCGCCGTCCGTGACGGAAGCGCCCCCCCCGCCATCGG CCCCTTTGGCGCCGGTCGACGTCAGCCCCGCCCCAACAGGGGCACCTGCGGCCCCCGCCCCGGAAGCTCCCGCTCCCACG GAAGCGCCCGCCGCCGGGCAGGAGCCCCCCACCGCCCCCGCCGCGCGGGCAACTCCGCCCTTGGACGGAAATCTGGTGAC TCGGGTCCAGCCGGCCGCCCTCGACAGCGTTCCGTCCATGGCTCCCGCCGATATCTACGAGACCGCCGCTTTCAACGATA ACGCCAGCTAA
Upstream 100 bases:
>100_bases CACGACCGAAGTCCTAGCGATAAAACGCCTTGGCCGACGGGCCTTCCGGCCGGGAACCAATCGTGGTACTTACTGATCCG CGATAGGACCAGGGGAACCA
Downstream 100 bases:
>100_bases GGCGGCGAAGGATGGAAACGCTCCTTGCCTATTGGTCCAGCAAAGAACTGATCACCAACGGACTGATCCTGCTGCACATG CTGGGAGCCCTGGTCACCGG
Product: Outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 616; Mature: 615
Protein sequence:
>616_residues MGTRERPGVSALAARWVMIAALLMGNTACNMTPTYERPKQELPTSYRNPLPEPSPEMPKPLSQWWTIFGSEELNTLVAEA LANNHDLKAATARILQAEAQAGSAASSLLPTITASGKRSIDSPQGGQGSDPSPPTNRSHRLSSAYVSASWEVDLWGKIRA SEASSLASAFANVHDREAVGLTLISDVVLTYIQYLEGLDRETVARSNIANMKAMYKAVTERVRLGESSNLELAQQRNVLA QTEATIPPIVLQRERAFNKLAVLLGRPPQTLALNGKTLRDLLVPEMSVGLPTDLLLRRPDIRKAEANLIAANANIGVARA KLFPTLSISGDCGWAAQYFDNITNPTSIFFTMAGTLAATIFDNGKTRSDIEYSESRYAELVETYQQTILTSLRDVEDSLM AVRLQGDLEVAQQEVLQASLDAYGLSSEAFRLGMVDYLNVLETQRTRFQAEDAKVQARFGRLEAAIGLYKALGGGMELDD GAVPPTPPAAPAPTGAPAPDKSAPMAPVAAPAPALAPAAVEAPSVTEAPPPPSAPLAPVDVSPAPTGAPAAPAPEAPAPT EAPAAGQEPPTAPAARATPPLDGNLVTRVQPAALDSVPSMAPADIYETAAFNDNAS
Sequences:
>Translated_616_residues MGTRERPGVSALAARWVMIAALLMGNTACNMTPTYERPKQELPTSYRNPLPEPSPEMPKPLSQWWTIFGSEELNTLVAEA LANNHDLKAATARILQAEAQAGSAASSLLPTITASGKRSIDSPQGGQGSDPSPPTNRSHRLSSAYVSASWEVDLWGKIRA SEASSLASAFANVHDREAVGLTLISDVVLTYIQYLEGLDRETVARSNIANMKAMYKAVTERVRLGESSNLELAQQRNVLA QTEATIPPIVLQRERAFNKLAVLLGRPPQTLALNGKTLRDLLVPEMSVGLPTDLLLRRPDIRKAEANLIAANANIGVARA KLFPTLSISGDCGWAAQYFDNITNPTSIFFTMAGTLAATIFDNGKTRSDIEYSESRYAELVETYQQTILTSLRDVEDSLM AVRLQGDLEVAQQEVLQASLDAYGLSSEAFRLGMVDYLNVLETQRTRFQAEDAKVQARFGRLEAAIGLYKALGGGMELDD GAVPPTPPAAPAPTGAPAPDKSAPMAPVAAPAPALAPAAVEAPSVTEAPPPPSAPLAPVDVSPAPTGAPAAPAPEAPAPT EAPAAGQEPPTAPAARATPPLDGNLVTRVQPAALDSVPSMAPADIYETAAFNDNAS >Mature_615_residues GTRERPGVSALAARWVMIAALLMGNTACNMTPTYERPKQELPTSYRNPLPEPSPEMPKPLSQWWTIFGSEELNTLVAEAL ANNHDLKAATARILQAEAQAGSAASSLLPTITASGKRSIDSPQGGQGSDPSPPTNRSHRLSSAYVSASWEVDLWGKIRAS EASSLASAFANVHDREAVGLTLISDVVLTYIQYLEGLDRETVARSNIANMKAMYKAVTERVRLGESSNLELAQQRNVLAQ TEATIPPIVLQRERAFNKLAVLLGRPPQTLALNGKTLRDLLVPEMSVGLPTDLLLRRPDIRKAEANLIAANANIGVARAK LFPTLSISGDCGWAAQYFDNITNPTSIFFTMAGTLAATIFDNGKTRSDIEYSESRYAELVETYQQTILTSLRDVEDSLMA VRLQGDLEVAQQEVLQASLDAYGLSSEAFRLGMVDYLNVLETQRTRFQAEDAKVQARFGRLEAAIGLYKALGGGMELDDG AVPPTPPAAPAPTGAPAPDKSAPMAPVAAPAPALAPAAVEAPSVTEAPPPPSAPLAPVDVSPAPTGAPAAPAPEAPAPTE APAAGQEPPTAPAARATPPLDGNLVTRVQPAALDSVPSMAPADIYETAAFNDNAS
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI1786785, Length=456, Percent_Identity=28.7280701754386, Blast_Score=177, Evalue=2e-45, Organism=Escherichia coli, GI2367348, Length=438, Percent_Identity=23.7442922374429, Blast_Score=76, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 65128; Mature: 64997
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTRERPGVSALAARWVMIAALLMGNTACNMTPTYERPKQELPTSYRNPLPEPSPEMPKP CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCCCH LSQWWTIFGSEELNTLVAEALANNHDLKAATARILQAEAQAGSAASSLLPTITASGKRSI HHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC DSPQGGQGSDPSPPTNRSHRLSSAYVSASWEVDLWGKIRASEASSLASAFANVHDREAVG CCCCCCCCCCCCCCCCCCHHHHHHEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHH LTLISDVVLTYIQYLEGLDRETVARSNIANMKAMYKAVTERVRLGESSNLELAQQRNVLA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHH QTEATIPPIVLQRERAFNKLAVLLGRPPQTLALNGKTLRDLLVPEMSVGLPTDLLLRRPD HHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCHHHCCCCHHHHHCCCC IRKAEANLIAANANIGVARAKLFPTLSISGDCGWAAQYFDNITNPTSIFFTMAGTLAATI CCCCCCCEEEECCCCCEEHHHHCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH FDNGKTRSDIEYSESRYAELVETYQQTILTSLRDVEDSLMAVRLQGDLEVAQQEVLQASL HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHH DAYGLSSEAFRLGMVDYLNVLETQRTRFQAEDAKVQARFGRLEAAIGLYKALGGGMELDD HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GAVPPTPPAAPAPTGAPAPDKSAPMAPVAAPAPALAPAAVEAPSVTEAPPPPSAPLAPVD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VSPAPTGAPAAPAPEAPAPTEAPAAGQEPPTAPAARATPPLDGNLVTRVQPAALDSVPSM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCC APADIYETAAFNDNAS CCHHHHHHHCCCCCCC >Mature Secondary Structure GTRERPGVSALAARWVMIAALLMGNTACNMTPTYERPKQELPTSYRNPLPEPSPEMPKP CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCCCH LSQWWTIFGSEELNTLVAEALANNHDLKAATARILQAEAQAGSAASSLLPTITASGKRSI HHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC DSPQGGQGSDPSPPTNRSHRLSSAYVSASWEVDLWGKIRASEASSLASAFANVHDREAVG CCCCCCCCCCCCCCCCCCHHHHHHEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHH LTLISDVVLTYIQYLEGLDRETVARSNIANMKAMYKAVTERVRLGESSNLELAQQRNVLA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHH QTEATIPPIVLQRERAFNKLAVLLGRPPQTLALNGKTLRDLLVPEMSVGLPTDLLLRRPD HHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCHHHCCCCHHHHHCCCC IRKAEANLIAANANIGVARAKLFPTLSISGDCGWAAQYFDNITNPTSIFFTMAGTLAATI CCCCCCCEEEECCCCCEEHHHHCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH FDNGKTRSDIEYSESRYAELVETYQQTILTSLRDVEDSLMAVRLQGDLEVAQQEVLQASL HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHH DAYGLSSEAFRLGMVDYLNVLETQRTRFQAEDAKVQARFGRLEAAIGLYKALGGGMELDD HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GAVPPTPPAAPAPTGAPAPDKSAPMAPVAAPAPALAPAAVEAPSVTEAPPPPSAPLAPVD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VSPAPTGAPAAPAPEAPAPTEAPAAGQEPPTAPAARATPPLDGNLVTRVQPAALDSVPSM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCC APADIYETAAFNDNAS CCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]