| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is senX3 [H]
Identifier: 83311278
GI number: 83311278
Start: 2360324
End: 2361823
Strand: Reverse
Name: senX3 [H]
Synonym: amb2179
Alternate gene names: 83311278
Gene position: 2361823-2360324 (Counterclockwise)
Preceding gene: 83311279
Following gene: 83311275
Centisome position: 47.55
GC content: 64.87
Gene sequence:
>1500_bases ATGGTTTGTCCCAGCGATCCCAAACGAAAAGCCCTCAGCCCCCTGGGCCGGCGGATCGTCATCTATACCGTAGTCTTCAG TTCGGTGGTCACCCTGATCATCAGCATTCTTCAGCTGGTCAACGAGTTCACCCAGCGGGAATCCATGGTGCGGGCGCAGT TGGACAGCGTCGATGTCTTGTTGCCCTCCATCGCCGAAAGCGTCTGGACCTTCAACGAGTCCCAGATCAGCTTGGCATTG CAGGCCCTGACCAGCATGCCGAACATGGAGAAGGCGACCATCACCACCGCGGAAGGTCGGATATGGTCCCGAGGCCGGGA GACCTCCACCCACACCATCGCCAGGACGTTCACGCTGGAGCGCCAGACCAGCAGGGGGCGGGAAGCCCTTGGCACGCTGG ACCTTCTCGCGGGCACGGATGCCGTCTATCTGGCGGTACTCACCCTGACGGCGGAAATTCTGTTCGGAAACGCCATCAAG ACTCTCATGGTGGCGGGTTTCATGGGCTGGCTGATTCACAGGCTGGTCATCAGCCGCCTGCCCCCGCTCAAGCGGGAAGT GGAAGCCTTGCTGGACGGCCTTGACCCGCCCATCGGCGGCGGGCCGGCGGAGACGGCCGCCAACCGCCCTTCCGGGGACG AAATCGACATCCTGCGAGGCAGCTTCGCCTGCATGGCGGCGCGGTTGAACGACGCCCTCGGCACCATGCGGAAGGCCAAG GACGAACTGCACCAGGCCAACCAGGCGCTGGACTCCCGCGTGCGGGACAAGACCGCCCAGTTGGAGGAAAGCAAGAAGGT CGCCGAAGAGGCCGCCGAGGCCGCCCTGCGTGCCATGGGGGAGCAACGCAACTTCCTCTCCATGGTCTCCCACGAGTTCC GGGGGCCTCTTTCCACCATCACCGGGGCGGCCCAGTTGATCGCCATATATGGCGGCGGGCATTCCGAGCTGGCCGACGAG GTCGCCAAGATCCATCGCGCCCTGGGCCGGATGTCGAACCTGATCAACGAATACCTCAACGAGGAGCGCCTGGACTCGGC GGCAAGCCCTCTGGACGCGGCGCGCTTCGACCTGGGCGGGATGGTCGAGGACGCCTGCGCGTCCGGCCTGTTCTCGACCA ACGATCGGCCCCTGGACGTCTCGACCGAACCCGGAGTGTTCGTGTTCGGCGACAGCGCCCTGATGTCCATCGCCGTTTCA AACATCGCCGACAACGCGCTGAAATTCTCGCCCGCCGACAGTCCGGTCACGGTCACCCTGAGGCGACGGGACGGCTTTGC CGCCGTGACGGTTCGCGACCATGGTCCGGGAATTCCTCCCGACGAACAGGAGCGGATCTTCGAGAAGTACTACCGTTCGA TCCGGACCGACCGGGTCTGTGGCGTCGGCCTCGGGCTGTATCTGGTCAAGCGGATCGTCGACCTGCATGGCGGCACCATC GCCATCGACAGCCCGCCCTCCGGCGGCACGGCCTTTACCGTGAGCCTGCCCCTGGCCTGA
Upstream 100 bases:
>100_bases TTTTTTCACGTTTGAGGACTGGGCGGGGTAACGCCAACTCTGGTATATATCTTTAGAGTTAATTTTCTTTGGTCTTCACG ATCAAGGGCTCCTTTTGACG
Downstream 100 bases:
>100_bases GCGGCTCTCCCCCCGAATCAGGGAATCTCGGAATCCGAGGCCGAGAGCATCGGCGGGGCCTTGGCGCCGTCGGGCAGAGG CCGGTCGTCGCCGCCCAAGG
Product: Signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MVCPSDPKRKALSPLGRRIVIYTVVFSSVVTLIISILQLVNEFTQRESMVRAQLDSVDVLLPSIAESVWTFNESQISLAL QALTSMPNMEKATITTAEGRIWSRGRETSTHTIARTFTLERQTSRGREALGTLDLLAGTDAVYLAVLTLTAEILFGNAIK TLMVAGFMGWLIHRLVISRLPPLKREVEALLDGLDPPIGGGPAETAANRPSGDEIDILRGSFACMAARLNDALGTMRKAK DELHQANQALDSRVRDKTAQLEESKKVAEEAAEAALRAMGEQRNFLSMVSHEFRGPLSTITGAAQLIAIYGGGHSELADE VAKIHRALGRMSNLINEYLNEERLDSAASPLDAARFDLGGMVEDACASGLFSTNDRPLDVSTEPGVFVFGDSALMSIAVS NIADNALKFSPADSPVTVTLRRRDGFAAVTVRDHGPGIPPDEQERIFEKYYRSIRTDRVCGVGLGLYLVKRIVDLHGGTI AIDSPPSGGTAFTVSLPLA
Sequences:
>Translated_499_residues MVCPSDPKRKALSPLGRRIVIYTVVFSSVVTLIISILQLVNEFTQRESMVRAQLDSVDVLLPSIAESVWTFNESQISLAL QALTSMPNMEKATITTAEGRIWSRGRETSTHTIARTFTLERQTSRGREALGTLDLLAGTDAVYLAVLTLTAEILFGNAIK TLMVAGFMGWLIHRLVISRLPPLKREVEALLDGLDPPIGGGPAETAANRPSGDEIDILRGSFACMAARLNDALGTMRKAK DELHQANQALDSRVRDKTAQLEESKKVAEEAAEAALRAMGEQRNFLSMVSHEFRGPLSTITGAAQLIAIYGGGHSELADE VAKIHRALGRMSNLINEYLNEERLDSAASPLDAARFDLGGMVEDACASGLFSTNDRPLDVSTEPGVFVFGDSALMSIAVS NIADNALKFSPADSPVTVTLRRRDGFAAVTVRDHGPGIPPDEQERIFEKYYRSIRTDRVCGVGLGLYLVKRIVDLHGGTI AIDSPPSGGTAFTVSLPLA >Mature_499_residues MVCPSDPKRKALSPLGRRIVIYTVVFSSVVTLIISILQLVNEFTQRESMVRAQLDSVDVLLPSIAESVWTFNESQISLAL QALTSMPNMEKATITTAEGRIWSRGRETSTHTIARTFTLERQTSRGREALGTLDLLAGTDAVYLAVLTLTAEILFGNAIK TLMVAGFMGWLIHRLVISRLPPLKREVEALLDGLDPPIGGGPAETAANRPSGDEIDILRGSFACMAARLNDALGTMRKAK DELHQANQALDSRVRDKTAQLEESKKVAEEAAEAALRAMGEQRNFLSMVSHEFRGPLSTITGAAQLIAIYGGGHSELADE VAKIHRALGRMSNLINEYLNEERLDSAASPLDAARFDLGGMVEDACASGLFSTNDRPLDVSTEPGVFVFGDSALMSIAVS NIADNALKFSPADSPVTVTLRRRDGFAAVTVRDHGPGIPPDEQERIFEKYYRSIRTDRVCGVGLGLYLVKRIVDLHGGTI AIDSPPSGGTAFTVSLPLA
Specific function: Part of the two-component regulatory system senX3/regX3. Phosphorylates regX3 under conditions of phosphate limitation. Probably does not itself sense phosphate concentrations, which may be relayed to senX3 by the pstSCAB phosphate transporter system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786912, Length=238, Percent_Identity=30.672268907563, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1788393, Length=221, Percent_Identity=28.9592760180996, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1786600, Length=230, Percent_Identity=29.5652173913043, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI145693157, Length=256, Percent_Identity=29.6875, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788713, Length=238, Percent_Identity=26.890756302521, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1790346, Length=268, Percent_Identity=26.4925373134328, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1789149, Length=301, Percent_Identity=25.2491694352159, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI1789403, Length=220, Percent_Identity=30, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI48994928, Length=236, Percent_Identity=27.5423728813559, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI87081816, Length=324, Percent_Identity=26.5432098765432, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1786783, Length=256, Percent_Identity=25.78125, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1787894, Length=253, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1790436, Length=217, Percent_Identity=29.4930875576037, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1788279, Length=213, Percent_Identity=25.3521126760563, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790861, Length=239, Percent_Identity=25.5230125523013, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1789808, Length=227, Percent_Identity=25.5506607929515, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1790551, Length=226, Percent_Identity=26.1061946902655, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1788549, Length=252, Percent_Identity=27.3809523809524, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1790567, Length=107, Percent_Identity=37.3831775700935, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 53916; Mature: 53916
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCPSDPKRKALSPLGRRIVIYTVVFSSVVTLIISILQLVNEFTQRESMVRAQLDSVDVL CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPSIAESVWTFNESQISLALQALTSMPNMEKATITTAEGRIWSRGRETSTHTIARTFTLE HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHCCCCCCCHHHHHHHEEEH RQTSRGREALGTLDLLAGTDAVYLAVLTLTAEILFGNAIKTLMVAGFMGWLIHRLVISRL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PPLKREVEALLDGLDPPIGGGPAETAANRPSGDEIDILRGSFACMAARLNDALGTMRKAK CCHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DELHQANQALDSRVRDKTAQLEESKKVAEEAAEAALRAMGEQRNFLSMVSHEFRGPLSTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH TGAAQLIAIYGGGHSELADEVAKIHRALGRMSNLINEYLNEERLDSAASPLDAARFDLGG HHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHCCCC MVEDACASGLFSTNDRPLDVSTEPGVFVFGDSALMSIAVSNIADNALKFSPADSPVTVTL HHHHHHHCCCCCCCCCCEECCCCCCEEEECCHHHHHHHHHHHHHCCEECCCCCCCEEEEE RRRDGFAAVTVRDHGPGIPPDEQERIFEKYYRSIRTDRVCGVGLGLYLVKRIVDLHGGTI EECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEE AIDSPPSGGTAFTVSLPLA EECCCCCCCEEEEEEECCC >Mature Secondary Structure MVCPSDPKRKALSPLGRRIVIYTVVFSSVVTLIISILQLVNEFTQRESMVRAQLDSVDVL CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPSIAESVWTFNESQISLALQALTSMPNMEKATITTAEGRIWSRGRETSTHTIARTFTLE HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHCCCCCCCHHHHHHHEEEH RQTSRGREALGTLDLLAGTDAVYLAVLTLTAEILFGNAIKTLMVAGFMGWLIHRLVISRL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PPLKREVEALLDGLDPPIGGGPAETAANRPSGDEIDILRGSFACMAARLNDALGTMRKAK CCHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DELHQANQALDSRVRDKTAQLEESKKVAEEAAEAALRAMGEQRNFLSMVSHEFRGPLSTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH TGAAQLIAIYGGGHSELADEVAKIHRALGRMSNLINEYLNEERLDSAASPLDAARFDLGG HHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHCCCC MVEDACASGLFSTNDRPLDVSTEPGVFVFGDSALMSIAVSNIADNALKFSPADSPVTVTL HHHHHHHCCCCCCCCCCEECCCCCCEEEECCHHHHHHHHHHHHHCCEECCCCCCCEEEEE RRRDGFAAVTVRDHGPGIPPDEQERIFEKYYRSIRTDRVCGVGLGLYLVKRIVDLHGGTI EECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEE AIDSPPSGGTAFTVSLPLA EECCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA