| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311275
Identifier: 83311275
GI number: 83311275
Start: 2357920
End: 2358408
Strand: Reverse
Name: 83311275
Synonym: amb2176
Alternate gene names: NA
Gene position: 2358408-2357920 (Counterclockwise)
Preceding gene: 83311278
Following gene: 83311274
Centisome position: 47.48
GC content: 68.92
Gene sequence:
>489_bases ATGGCAACCTCCTCGGCAACCCATTCCAAGCCCTTCATCCAGACGCCCGTCCCGCGCAAGCCGGTCCGAAGGTCCGGCGG TGGCGGCAAGGCGAAGCTTCTGGCCCTGGGCGGCATCGCGCTGGTGGTGGCCGCCCTGGGAAGCGCCGCCCTGCTGATGC GCCCCCATACCGGAGGCAGTGGTCTGGCGGCGACGCCGGAAGCCTTTGCCGAGCAGATGGAAGCCGCGGCCCGGGCCGGC GGCGGGACGGTCCCCCATGTCTTCGGCGGCACCATCCGCGCCGAGCGCAACGGCGCCGTGCTGGCCCTGGTGGCCGACAA CGTGCCGCCCAGCGCCTGCGTCTCCGTGGGGTGGAAGCTGGTCCGCAAGGGATTGCTCTCCATCAACGGCACCATGCCGC TCCGCGTCTCGGCGGCCAAATTATCGGACCTGTGCAATCAGGAAGACGGCAATGCCGTCCTCACCTGGATTCCAAAACTG CCTGAATAG
Upstream 100 bases:
>100_bases CCAATCCTTGCCCGGCCCGACCCGCCGTCAACCTTGCCTTAAGCAATCCCTGTCATGATGGGATCATCCCCTTCATTCCT TGGGAAGGCGCAGAAGCGTC
Downstream 100 bases:
>100_bases CAATCCATCATAGATATTGATTCGTTCAACACCTCCTGCCACCATATGACGGGTTGGGCAACTCTTATGGAGTTTGGGGA ATGGACGATATCGATCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MATSSATHSKPFIQTPVPRKPVRRSGGGGKAKLLALGGIALVVAALGSAALLMRPHTGGSGLAATPEAFAEQMEAAARAG GGTVPHVFGGTIRAERNGAVLALVADNVPPSACVSVGWKLVRKGLLSINGTMPLRVSAAKLSDLCNQEDGNAVLTWIPKL PE
Sequences:
>Translated_162_residues MATSSATHSKPFIQTPVPRKPVRRSGGGGKAKLLALGGIALVVAALGSAALLMRPHTGGSGLAATPEAFAEQMEAAARAG GGTVPHVFGGTIRAERNGAVLALVADNVPPSACVSVGWKLVRKGLLSINGTMPLRVSAAKLSDLCNQEDGNAVLTWIPKL PE >Mature_161_residues ATSSATHSKPFIQTPVPRKPVRRSGGGGKAKLLALGGIALVVAALGSAALLMRPHTGGSGLAATPEAFAEQMEAAARAGG GTVPHVFGGTIRAERNGAVLALVADNVPPSACVSVGWKLVRKGLLSINGTMPLRVSAAKLSDLCNQEDGNAVLTWIPKLP E
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16422; Mature: 16291
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSSATHSKPFIQTPVPRKPVRRSGGGGKAKLLALGGIALVVAALGSAALLMRPHTGGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCEEEEEECCCCCC GLAATPEAFAEQMEAAARAGGGTVPHVFGGTIRAERNGAVLALVADNVPPSACVSVGWKL CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHH VRKGLLSINGTMPLRVSAAKLSDLCNQEDGNAVLTWIPKLPE HHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCEEEEECCCCCC >Mature Secondary Structure ATSSATHSKPFIQTPVPRKPVRRSGGGGKAKLLALGGIALVVAALGSAALLMRPHTGGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCEEEEEECCCCCC GLAATPEAFAEQMEAAARAGGGTVPHVFGGTIRAERNGAVLALVADNVPPSACVSVGWKL CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHH VRKGLLSINGTMPLRVSAAKLSDLCNQEDGNAVLTWIPKLPE HHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA