| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311248
Identifier: 83311248
GI number: 83311248
Start: 2325909
End: 2326889
Strand: Reverse
Name: 83311248
Synonym: amb2149
Alternate gene names: NA
Gene position: 2326889-2325909 (Counterclockwise)
Preceding gene: 83311250
Following gene: 83311243
Centisome position: 46.85
GC content: 67.38
Gene sequence:
>981_bases ATGAGCACCACCATCCGCGACATCGCTGCCGCCGACCTGGAGCGCGTTATCGAGCTGGATCGCCGCCTGACCGGCAAGCC GCGCCGCAATTACCATGAAAAGCGCCTGGCGGCCGTCACCGCCGAGCCGGCCAGCTTCGTCACCCTGACCGCCGCCGACG GGCCGGTGCTCAAGGGCTATGCCTACGCCCATATCCTGGACGGAGAGTTCGGCGGCGCCGGCCCCGTCGGCGTGCTCGAC ACCATCGGCATCGACCCCGACCAGCGGGGCCAGGGCCTGGGCCGCAAGCTGCTGGCCGCCCTGGAGGAAGCGCTGAAAAA GCGCGGCGTCAAGGAACTGGTCAGCCAGGCCGACTGGACCGAACACGGCATCACCCGCTTCTTCCAGTCCGCCGGCTTCG AACTGGCGCCGCGCCTGGTGCTGGAACGCACCACCGACAACGTCTCCGATTTCGAGGCCCCCCTGGCCCAGCAGGTCCGT GACAGCGACGAAGTCGACCTGTCCGATCCCTCCGGCGACGACTATGCCGCCCTGTCGCGCGACCGCGTTCCCGTGCGCTC GCTGACCGAGGCCGACTACCCCTTCATCGTCTCGGTAGACCGCAAGGTCACCCGCCGTGACCGCTCGACCTACTACACCC GCAAGATCGCCGAAGTGACCAAGGAATCCGGCGTGCGCGTCTCCCTGGTCGCCGAGATCGACAACCTGTTCGCCGGCTTC GTCATGGCCCGTACCGAATACGGTGAATTCGGCCGCGCCCAGACCACCGCCGTCCTCGACACCATCGGCGTCGACCCCGC CTATGCCCGCCACAGCGTCGGCCGCGCCATGATGAGCCAGTTGCTCACCAATCTGTCGTCGCTCGGCGTGGAAAAGGTTC AGACCCAGTTGGCCTGGGACAGCTTCGACCTGATGGGCTTCCTCGCCCGTTGCGGCTTCAAGCCGTCCCAGCGTCTGATC TTCCAGCGTCGGCTCGGGTAA
Upstream 100 bases:
>100_bases ATTCATTTAACAGGGTACCGCCCGCCGAGGGATGCCGTCAAGACCCGGCACCCACCCCAAACCAGACCGGTGGACCCACG AGAGGGAGGTTCGCGAGTTC
Downstream 100 bases:
>100_bases CCCCCCCTACCCTGCCAGACTCGGCGGGTCGCCCTTCCCGTTCCCGACCCGCCCGAAGGGGCCGGCAGTTGCCCGACTGC CGGCCCCGCTTCCGTTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; Acetyltransferase
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSTTIRDIAAADLERVIELDRRLTGKPRRNYHEKRLAAVTAEPASFVTLTAADGPVLKGYAYAHILDGEFGGAGPVGVLD TIGIDPDQRGQGLGRKLLAALEEALKKRGVKELVSQADWTEHGITRFFQSAGFELAPRLVLERTTDNVSDFEAPLAQQVR DSDEVDLSDPSGDDYAALSRDRVPVRSLTEADYPFIVSVDRKVTRRDRSTYYTRKIAEVTKESGVRVSLVAEIDNLFAGF VMARTEYGEFGRAQTTAVLDTIGVDPAYARHSVGRAMMSQLLTNLSSLGVEKVQTQLAWDSFDLMGFLARCGFKPSQRLI FQRRLG
Sequences:
>Translated_326_residues MSTTIRDIAAADLERVIELDRRLTGKPRRNYHEKRLAAVTAEPASFVTLTAADGPVLKGYAYAHILDGEFGGAGPVGVLD TIGIDPDQRGQGLGRKLLAALEEALKKRGVKELVSQADWTEHGITRFFQSAGFELAPRLVLERTTDNVSDFEAPLAQQVR DSDEVDLSDPSGDDYAALSRDRVPVRSLTEADYPFIVSVDRKVTRRDRSTYYTRKIAEVTKESGVRVSLVAEIDNLFAGF VMARTEYGEFGRAQTTAVLDTIGVDPAYARHSVGRAMMSQLLTNLSSLGVEKVQTQLAWDSFDLMGFLARCGFKPSQRLI FQRRLG >Mature_325_residues STTIRDIAAADLERVIELDRRLTGKPRRNYHEKRLAAVTAEPASFVTLTAADGPVLKGYAYAHILDGEFGGAGPVGVLDT IGIDPDQRGQGLGRKLLAALEEALKKRGVKELVSQADWTEHGITRFFQSAGFELAPRLVLERTTDNVSDFEAPLAQQVRD SDEVDLSDPSGDDYAALSRDRVPVRSLTEADYPFIVSVDRKVTRRDRSTYYTRKIAEVTKESGVRVSLVAEIDNLFAGFV MARTEYGEFGRAQTTAVLDTIGVDPAYARHSVGRAMMSQLLTNLSSLGVEKVQTQLAWDSFDLMGFLARCGFKPSQRLIF QRRLG
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35976; Mature: 35845
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTIRDIAAADLERVIELDRRLTGKPRRNYHEKRLAAVTAEPASFVTLTAADGPVLKGY CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCE AYAHILDGEFGGAGPVGVLDTIGIDPDQRGQGLGRKLLAALEEALKKRGVKELVSQADWT EEEEEECCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCH EHGITRFFQSAGFELAPRLVLERTTDNVSDFEAPLAQQVRDSDEVDLSDPSGDDYAALSR HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCC DRVPVRSLTEADYPFIVSVDRKVTRRDRSTYYTRKIAEVTKESGVRVSLVAEIDNLFAGF CCCCHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHH VMARTEYGEFGRAQTTAVLDTIGVDPAYARHSVGRAMMSQLLTNLSSLGVEKVQTQLAWD HHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH SFDLMGFLARCGFKPSQRLIFQRRLG HHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure STTIRDIAAADLERVIELDRRLTGKPRRNYHEKRLAAVTAEPASFVTLTAADGPVLKGY CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCE AYAHILDGEFGGAGPVGVLDTIGIDPDQRGQGLGRKLLAALEEALKKRGVKELVSQADWT EEEEEECCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCH EHGITRFFQSAGFELAPRLVLERTTDNVSDFEAPLAQQVRDSDEVDLSDPSGDDYAALSR HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCC DRVPVRSLTEADYPFIVSVDRKVTRRDRSTYYTRKIAEVTKESGVRVSLVAEIDNLFAGF CCCCHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHH VMARTEYGEFGRAQTTAVLDTIGVDPAYARHSVGRAMMSQLLTNLSSLGVEKVQTQLAWD HHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH SFDLMGFLARCGFKPSQRLIFQRRLG HHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA