| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is cheY [H]
Identifier: 83311045
GI number: 83311045
Start: 2090516
End: 2091427
Strand: Reverse
Name: cheY [H]
Synonym: amb1946
Alternate gene names: 83311045
Gene position: 2091427-2090516 (Counterclockwise)
Preceding gene: 83311046
Following gene: 83311044
Centisome position: 42.11
GC content: 57.79
Gene sequence:
>912_bases ATGACCTTCGACATGTTGAAGTTTCCGCCGACCATGGCGGCGGTGCTGACCCGCACCCGCGACTACTTCCAAGAGGAGAT CGGACTCAAGGTCTCTAGAGCGAAGCCGCGCACCGGTAACGTCGATGCATTACAATTGCGCGATGTCACCGCCGTCGTCT GCACCGATGGTCCGGTCAAGCTGCTGATCGCCTTCAGCTTCCAGCGGGTCCTGCTCGAACACCTCCGCGAGGTGATGACC GCCGACCTGAACGTCCTACCCTCCGAGCGCGAACTGTTCCTGCGGGAAACGGCCGGCGAGACGGTCAACTTCATCCTCGG ACACGCCACTGCGGATCTGGCCGAGGGCGGCAACGTGATACGTTTGTCCCCCCCTTCCGTATTAGACGAAGAAAAGAACA TTCTTCGTCCCAAAAAGGCGATTTTCACCACCATCGAAATGACAACCAGCCATGGTACTCTCGACATCAATTTCATCGGC CCGTCCGAGCTTTTCGACCGTAGATTGAACTTTATTAACGAAGAAGAAGTTCAAGGGGGGAACATGCACCCGCTTAAGGT TCTGATTGTTGACGACTCGCTCCTGACCGTCCGGACGCTGACCGGCATGCTGATGGAACTTGGGCATCTGGTGGTCCAGA CGGCGGGAAGCGGGGCTCTGGCCCTGGAGGCCTATCGTCAGGCCAAGCCCGACCTCGTCACCATGGACATCACCATGCCC GACATGGACGGAATCGAAGCCACCACCGGTATCTTGAAGGAATTCCCTGACGCCAACATCATCATGGTGACCTCCCATGG CCAACAGGGTATGGTGATGAAGGCTGTGAAGGCAGGCGCCAAGGGCTATGTCCTCAAGCCCATCAAGGCGGACAAGCTGC GTGAAATGATCGCGCGGGTCTTCAAGGCCTGA
Upstream 100 bases:
>100_bases AGGAACTGGGCGGCAGCATCCGCATTGATTCACGGCCCGGCCACGGCACCCACTTCCTGTTCCACATCCCCTTCCCCCCT CAGGTGGAGGGGCGGGCCCA
Downstream 100 bases:
>100_bases TGGAACTTTTCCGCAAGGGTCAGGGGAGCCGGATGGCGGCTGTGTCCAAACGTGCGCATGCGGCGCAGGCCGCCTGCAGC GACGGTGCCATGGATGTCAT
Product: response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTFDMLKFPPTMAAVLTRTRDYFQEEIGLKVSRAKPRTGNVDALQLRDVTAVVCTDGPVKLLIAFSFQRVLLEHLREVMT ADLNVLPSERELFLRETAGETVNFILGHATADLAEGGNVIRLSPPSVLDEEKNILRPKKAIFTTIEMTTSHGTLDINFIG PSELFDRRLNFINEEEVQGGNMHPLKVLIVDDSLLTVRTLTGMLMELGHLVVQTAGSGALALEAYRQAKPDLVTMDITMP DMDGIEATTGILKEFPDANIIMVTSHGQQGMVMKAVKAGAKGYVLKPIKADKLREMIARVFKA
Sequences:
>Translated_303_residues MTFDMLKFPPTMAAVLTRTRDYFQEEIGLKVSRAKPRTGNVDALQLRDVTAVVCTDGPVKLLIAFSFQRVLLEHLREVMT ADLNVLPSERELFLRETAGETVNFILGHATADLAEGGNVIRLSPPSVLDEEKNILRPKKAIFTTIEMTTSHGTLDINFIG PSELFDRRLNFINEEEVQGGNMHPLKVLIVDDSLLTVRTLTGMLMELGHLVVQTAGSGALALEAYRQAKPDLVTMDITMP DMDGIEATTGILKEFPDANIIMVTSHGQQGMVMKAVKAGAKGYVLKPIKADKLREMIARVFKA >Mature_302_residues TFDMLKFPPTMAAVLTRTRDYFQEEIGLKVSRAKPRTGNVDALQLRDVTAVVCTDGPVKLLIAFSFQRVLLEHLREVMTA DLNVLPSERELFLRETAGETVNFILGHATADLAEGGNVIRLSPPSVLDEEKNILRPKKAIFTTIEMTTSHGTLDINFIGP SELFDRRLNFINEEEVQGGNMHPLKVLIVDDSLLTVRTLTGMLMELGHLVVQTAGSGALALEAYRQAKPDLVTMDITMPD MDGIEATTGILKEFPDANIIMVTSHGQQGMVMKAVKAGAKGYVLKPIKADKLREMIARVFKA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY seems to regulate the clockwise (CW) rotation [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=123, Percent_Identity=34.1463414634146, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1788550, Length=117, Percent_Identity=31.6239316239316, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1789149, Length=118, Percent_Identity=35.5932203389831, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 33421; Mature: 33289
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDMLKFPPTMAAVLTRTRDYFQEEIGLKVSRAKPRTGNVDALQLRDVTAVVCTDGPVK CCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECEEEEEECCCCCE LLIAFSFQRVLLEHLREVMTADLNVLPSERELFLRETAGETVNFILGHATADLAEGGNVI EHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEECCHHHHHCCCCEE RLSPPSVLDEEKNILRPKKAIFTTIEMTTSHGTLDINFIGPSELFDRRLNFINEEEVQGG EECCCHHHCCHHHHCCCCHHHEEEEEEEECCCEEEEEEECHHHHHHHHHCCCCHHHCCCC NMHPLKVLIVDDSLLTVRTLTGMLMELGHLVVQTAGSGALALEAYRQAKPDLVTMDITMP CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCEEEEEEECC DMDGIEATTGILKEFPDANIIMVTSHGQQGMVMKAVKAGAKGYVLKPIKADKLREMIARV CCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHH FKA HCC >Mature Secondary Structure TFDMLKFPPTMAAVLTRTRDYFQEEIGLKVSRAKPRTGNVDALQLRDVTAVVCTDGPVK CCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECEEEEEECCCCCE LLIAFSFQRVLLEHLREVMTADLNVLPSERELFLRETAGETVNFILGHATADLAEGGNVI EHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEECCHHHHHCCCCEE RLSPPSVLDEEKNILRPKKAIFTTIEMTTSHGTLDINFIGPSELFDRRLNFINEEEVQGG EECCCHHHCCHHHHCCCCHHHEEEEEEEECCCEEEEEEECHHHHHHHHHCCCCHHHCCCC NMHPLKVLIVDDSLLTVRTLTGMLMELGHLVVQTAGSGALALEAYRQAKPDLVTMDITMP CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCEEEEEEECC DMDGIEATTGILKEFPDANIIMVTSHGQQGMVMKAVKAGAKGYVLKPIKADKLREMIARV CCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHH FKA HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]